RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 KIAA1211Q6ZU35 1233 aa6.02□□□□□ -1.45
NPHP3-206ENST00000474871 NEK9Q8TD19 979 aa6.02□□□□□ -1.45
NPHP3-206ENST00000474871 ZNF396Q96N95 335 aaPredicted RBP6.02□□□□□ -1.45
NPHP3-206ENST00000474871 ANAPC4Q9UJX5 808 aa6.02□□□□□ -1.45
NPHP3-206ENST00000474871 AMOTL2Q9Y2J4 779 aa6.02□□□□□ -1.45
NPHP3-206ENST00000474871 OFD1O75665 1012 aa6.02□□□□□ -1.45
NPHP3-206ENST00000474871 ZRSR2Q15696 482 aaKnown RBP6.02□□□□□ -1.45
NPHP3-206ENST00000474871 SUFUQ9UMX1 484 aa6.02□□□□□ -1.45
NPHP3-206ENST00000474871 ZCCHC11Q5TAX3 1644 aaKnown RBP6.02□□□□□ -1.45
NPHP3-206ENST00000474871 PREX2Q70Z35 1606 aa6.02□□□□□ -1.45
NPHP3-206ENST00000474871 HOXD10P28358 340 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 PSME1Q06323 249 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 CCDC97Q96F63 343 aaPredicted RBP6.01□□□□□ -1.45
NPHP3-206ENST00000474871 C22orf23Q9BZE7 217 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 ATG3Q9NT62 314 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 FRMD4BQ9Y2L6 1034 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 CTDP1Q9Y5B0 961 aaPredicted RBP6.01□□□□□ -1.45
NPHP3-206ENST00000474871 CCDC194A0A1B0GVG4 234 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 BBOX1O75936 387 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 SLFN14P0C7P3 912 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 KCNJ4P48050 445 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 ABCC5O15440 1437 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 SETD1BQ9UPS6 1966 aaKnown RBP6.01□□□□□ -1.45
NPHP3-206ENST00000474871 UHRF1BP1LA0JNW5 1464 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 MTHFD1LQ6UB35 978 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 CDC37L1Q7L3B6 337 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 MUC3BQ9H195 1237 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 HOXC10Q9NYD6 342 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 U2SURPO15042 1029 aaKnown RBP6.01□□□□□ -1.45
NPHP3-206ENST00000474871 ABCD1P33897 745 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 PHC3Q8NDX5 983 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 ACRBPQ8NEB7 543 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 AGBL1Q96MI9 1066 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 ROCK1Q13464 1354 aa6.01□□□□□ -1.45
NPHP3-206ENST00000474871 LRRC10BA6NIK2 292 aa6□□□□□ -1.45
NPHP3-206ENST00000474871 SSR1P43307 286 aaKnown RBP6□□□□□ -1.45
NPHP3-206ENST00000474871 KLHL23Q8NBE8 558 aa6□□□□□ -1.45
NPHP3-206ENST00000474871 SPAG9O60271 1321 aaKnown RBP6□□□□□ -1.45
NPHP3-206ENST00000474871 TTC37Q6PGP7 1564 aa6□□□□□ -1.45
NPHP3-206ENST00000474871 RETREG2Q8NC44 543 aa6□□□□□ -1.45
NPHP3-206ENST00000474871 ZCRB1Q8TBF4 217 aaKnown RBP6□□□□□ -1.45
NPHP3-206ENST00000474871 CDC42BPBQ9Y5S2 1711 aa6□□□□□ -1.45
NPHP3-206ENST00000474871 LIG1P18858 919 aa6□□□□□ -1.45
NPHP3-206ENST00000474871 DSG3P32926 999 aa6□□□□□ -1.45
NPHP3-206ENST00000474871 ENOX1Q8TC92 643 aaKnown RBP6□□□□□ -1.45
NPHP3-206ENST00000474871 RSPH1Q8WYR4 309 aa6□□□□□ -1.45
NPHP3-206ENST00000474871 LZTS2Q9BRK4 669 aa6□□□□□ -1.45
NPHP3-206ENST00000474871 BOLA2-SMG1P6H3BVE0 249 aa5.99□□□□□ -1.45
NPHP3-206ENST00000474871 KIF3CO14782 793 aa5.99□□□□□ -1.45
NPHP3-206ENST00000474871 LARP6Q9BRS8 491 aaKnown RBP5.99□□□□□ -1.45
NPHP3-206ENST00000474871 BIRC2Q13490 618 aa5.99□□□□□ -1.45
NPHP3-206ENST00000474871 RBM46Q8TBY0 533 aaKnown RBP5.99□□□□□ -1.45
NPHP3-206ENST00000474871 FAXDC2Q96IV6 333 aa5.99□□□□□ -1.45
NPHP3-206ENST00000474871 RBM28Q9NW13 759 aaKnown RBP5.99□□□□□ -1.45
NPHP3-206ENST00000474871 MAGEC2Q9UBF1 373 aaPredicted RBP5.99□□□□□ -1.45
NPHP3-206ENST00000474871 LARP1BQ659C4 914 aaKnown RBP5.99□□□□□ -1.45
NPHP3-206ENST00000474871 GINM1Q9NU53 330 aa5.99□□□□□ -1.45
NPHP3-206ENST00000474871 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.99□□□□□ -1.45
NPHP3-206ENST00000474871 TBC1D2BQ9UPU7 963 aa5.99□□□□□ -1.45
NPHP3-206ENST00000474871 ZNF644Q9H582 1327 aaPredicted RBP5.99□□□□□ -1.45
NPHP3-206ENST00000474871 SAMD9LQ8IVG5 1584 aa5.99□□□□□ -1.45
NPHP3-206ENST00000474871 ADGRL2O95490 1459 aa5.99□□□□□ -1.45
NPHP3-206ENST00000474871 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.99□□□□□ -1.45
NPHP3-206ENST00000474871 PPP1R15AO75807 674 aaPredicted RBP5.99□□□□□ -1.45
NPHP3-206ENST00000474871 OATP04181 439 aa5.99□□□□□ -1.45
NPHP3-206ENST00000474871 PANK2Q9BZ23 570 aa5.99□□□□□ -1.45
NPHP3-206ENST00000474871 ARHGEF5Q12774 1597 aa5.99□□□□□ -1.45
NPHP3-206ENST00000474871 SHANK2Q9UPX8 1470 aa5.98□□□□□ -1.45
NPHP3-206ENST00000474871 MTERF4Q7Z6M4 381 aaKnown RBP5.98□□□□□ -1.45
NPHP3-206ENST00000474871 PLPP6Q8IY26 295 aa5.98□□□□□ -1.45
NPHP3-206ENST00000474871 YIPF2Q9BWQ6 316 aa5.98□□□□□ -1.45
NPHP3-206ENST00000474871 BLOC1S6Q9UL45 172 aa5.98□□□□□ -1.45
NPHP3-206ENST00000474871 MYO5CQ9NQX4 1742 aa5.98□□□□□ -1.45
NPHP3-206ENST00000474871 KDM5BQ9UGL1 1544 aa5.98□□□□□ -1.45
NPHP3-206ENST00000474871 TBC1D22AQ8WUA7 517 aa5.98□□□□□ -1.45
NPHP3-206ENST00000474871 SENP7Q9BQF6 1050 aa5.98□□□□□ -1.45
NPHP3-206ENST00000474871 NOL10Q9BSC4 688 aaKnown RBP5.98□□□□□ -1.45
NPHP3-206ENST00000474871 DENND4BO75064 1496 aaPredicted RBP5.98□□□□□ -1.45
NPHP3-206ENST00000474871 MAGEA8P43361 318 aa5.98□□□□□ -1.45
NPHP3-206ENST00000474871 ZSCAN26Q16670 478 aa5.98□□□□□ -1.45
NPHP3-206ENST00000474871 POTEDQ86YR6 584 aa5.98□□□□□ -1.45
NPHP3-206ENST00000474871 STAG2Q8N3U4 1231 aa5.98□□□□□ -1.45
NPHP3-206ENST00000474871 KLF15Q9UIH9 416 aa5.98□□□□□ -1.45
NPHP3-206ENST00000474871 MPHOSPH10O00566 681 aaKnown RBP5.97□□□□□ -1.45
NPHP3-206ENST00000474871 CAND2O75155 1236 aa5.97□□□□□ -1.45
NPHP3-206ENST00000474871 FLT3P36888 993 aa5.97□□□□□ -1.45
NPHP3-206ENST00000474871 GORABQ5T7V8 394 aa5.97□□□□□ -1.45
NPHP3-206ENST00000474871 TAF4BQ92750 862 aa5.97□□□□□ -1.45
NPHP3-206ENST00000474871 FAM212AQ96EL1 285 aa5.97□□□□□ -1.45
NPHP3-206ENST00000474871 FMNL2Q96PY5 1086 aa5.97□□□□□ -1.45
NPHP3-206ENST00000474871 SLC7A5Q01650 507 aa5.97□□□□□ -1.45
NPHP3-206ENST00000474871 OGFOD1Q8N543 542 aa5.97□□□□□ -1.45
NPHP3-206ENST00000474871 CFDP1Q9UEE9 299 aaPredicted RBP5.97□□□□□ -1.45
NPHP3-206ENST00000474871 ZNF777Q9ULD5 760 aaPredicted RBP5.97□□□□□ -1.45
NPHP3-206ENST00000474871 JADE2Q9NQC1 790 aa5.97□□□□□ -1.45
NPHP3-206ENST00000474871 CHIC2Q9UKJ5 165 aa5.97□□□□□ -1.45
NPHP3-206ENST00000474871 BRMS1Q9HCU9 246 aa5.97□□□□□ -1.45
NPHP3-206ENST00000474871 RRP7BPQ9NSQ0 103 aa5.97□□□□□ -1.45
NPHP3-206ENST00000474871 TSPY4P0CV99 314 aa5.96□□□□□ -1.45
NPHP3-206ENST00000474871 TSPY10P0CW01 314 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms