RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 MEIS3Q99687 375 aa20.06■□□□□ 0.8
TPR-205ENST00000474852 CASC1Q6TDU7 716 aa20.05■□□□□ 0.8
TPR-205ENST00000474852 CLTCQ00610 1675 aaKnown RBP20.05■□□□□ 0.8
TPR-205ENST00000474852 LMOD3Q0VAK6 560 aa20.05■□□□□ 0.8
TPR-205ENST00000474852 AEBP1Q8IUX7 1158 aa20.05■□□□□ 0.8
TPR-205ENST00000474852 RBM10P98175 930 aaKnown RBP20.04■□□□□ 0.8
TPR-205ENST00000474852 NOL8Q76FK4 1167 aaKnown RBP20.04■□□□□ 0.8
TPR-205ENST00000474852 ZDHHC9Q9Y397 364 aa20.04■□□□□ 0.8
TPR-205ENST00000474852 MSH6P52701 1360 aa20.04■□□□□ 0.8
TPR-205ENST00000474852 NSFL1CQ9UNZ2 370 aaKnown RBP20.04■□□□□ 0.8
TPR-205ENST00000474852 DLG5Q8TDM6 1919 aa20.04■□□□□ 0.8
TPR-205ENST00000474852 TSHZ3Q63HK5 1081 aa20.03■□□□□ 0.8
TPR-205ENST00000474852 MCM10Q7L590 875 aa20.03■□□□□ 0.8
TPR-205ENST00000474852 ATP10DQ9P241 1426 aa20.03■□□□□ 0.8
TPR-205ENST00000474852 SYCE3A1L190 88 aa20.03■□□□□ 0.8
TPR-205ENST00000474852 R3HCC1Q9Y3T6 440 aaKnown RBP20.03■□□□□ 0.8
TPR-205ENST00000474852 XPCQ01831 940 aaPredicted RBP20.02■□□□□ 0.8
TPR-205ENST00000474852 OFD1O75665 1012 aa20.02■□□□□ 0.8
TPR-205ENST00000474852 ALKQ9UM73 1620 aa20.01■□□□□ 0.79
TPR-205ENST00000474852 TMEM131LA2VDJ0 1609 aa20.01■□□□□ 0.79
TPR-205ENST00000474852 FOXD4L6Q3SYB3 417 aaPredicted RBP20.01■□□□□ 0.79
TPR-205ENST00000474852 SLC4A10Q6U841 1118 aa20.01■□□□□ 0.79
TPR-205ENST00000474852 FOXD4L3Q6VB84 417 aaPredicted RBP20.01■□□□□ 0.79
TPR-205ENST00000474852 RNF214Q8ND24 703 aa20.01■□□□□ 0.79
TPR-205ENST00000474852 COG3Q96JB2 828 aa20.01■□□□□ 0.79
TPR-205ENST00000474852 TMEM63CQ9P1W3 806 aa20.01■□□□□ 0.79
TPR-205ENST00000474852 RPAP2Q8IXW5 612 aaPredicted RBP20■□□□□ 0.79
TPR-205ENST00000474852 NEK4P51957 841 aa20■□□□□ 0.79
TPR-205ENST00000474852 CWC22Q9HCG8 908 aaKnown RBP20■□□□□ 0.79
TPR-205ENST00000474852 MIS18AQ9NYP9 233 aa20■□□□□ 0.79
TPR-205ENST00000474852 YEATS2Q9ULM3 1422 aa20■□□□□ 0.79
TPR-205ENST00000474852 REC8O95072 547 aa20■□□□□ 0.79
TPR-205ENST00000474852 ARHGAP31Q2M1Z3 1444 aa20■□□□□ 0.79
TPR-205ENST00000474852 SULT6B1Q6IMI4 303 aa20■□□□□ 0.79
TPR-205ENST00000474852 REREQ9P2R6 1566 aa20■□□□□ 0.79
TPR-205ENST00000474852 DIP2CQ9Y2E4 1556 aa20■□□□□ 0.79
TPR-205ENST00000474852 RTL1A6NKG5 1358 aa19.99■□□□□ 0.79
TPR-205ENST00000474852 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.99■□□□□ 0.79
TPR-205ENST00000474852 ZBTB7CA1YPR0 619 aa19.98■□□□□ 0.79
TPR-205ENST00000474852 ERC2O15083 957 aa19.98■□□□□ 0.79
TPR-205ENST00000474852 F6X3S4 739 aa19.98■□□□□ 0.79
TPR-205ENST00000474852 SOX12O15370 315 aa19.98■□□□□ 0.79
TPR-205ENST00000474852 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.97■□□□□ 0.79
TPR-205ENST00000474852 RGS12O14924 1447 aa19.97■□□□□ 0.79
TPR-205ENST00000474852 SLC4A2P04920 1241 aa19.97■□□□□ 0.79
TPR-205ENST00000474852 PDCL3Q9H2J4 239 aa19.97■□□□□ 0.79
TPR-205ENST00000474852 ATP7BP35670 1465 aa19.97■□□□□ 0.79
TPR-205ENST00000474852 FAM13BQ9NYF5 915 aa19.96■□□□□ 0.79
TPR-205ENST00000474852 EXOC6BQ9Y2D4 811 aa19.96■□□□□ 0.79
TPR-205ENST00000474852 CDK12Q9NYV4 1490 aaPredicted RBP19.96■□□□□ 0.79
TPR-205ENST00000474852 TPRNQ4KMQ1 711 aa19.96■□□□□ 0.79
TPR-205ENST00000474852 NOL7Q9UMY1 257 aaKnown RBP19.96■□□□□ 0.79
TPR-205ENST00000474852 TXNDC2Q86VQ3 553 aa19.95■□□□□ 0.78
TPR-205ENST00000474852 TMX3Q96JJ7 454 aa19.95■□□□□ 0.78
TPR-205ENST00000474852 ARID3AQ99856 593 aa19.95■□□□□ 0.78
TPR-205ENST00000474852 PREX1Q8TCU6 1659 aa19.95■□□□□ 0.78
TPR-205ENST00000474852 PDLIM2Q96JY6 352 aa19.95■□□□□ 0.78
TPR-205ENST00000474852 KIF24Q5T7B8 1368 aa19.95■□□□□ 0.78
TPR-205ENST00000474852 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.95■□□□□ 0.78
TPR-205ENST00000474852 EDC4Q6P2E9 1401 aaKnown RBP19.94■□□□□ 0.78
TPR-205ENST00000474852 WASLO00401 505 aaPredicted RBP19.94■□□□□ 0.78
TPR-205ENST00000474852 LRSAM1Q6UWE0 723 aa19.94■□□□□ 0.78
TPR-205ENST00000474852 PDE1AP54750 535 aa19.94■□□□□ 0.78
TPR-205ENST00000474852 G2E3Q7L622 706 aa19.93■□□□□ 0.78
TPR-205ENST00000474852 NUDT16Q96DE0 195 aaKnown RBP19.93■□□□□ 0.78
TPR-205ENST00000474852 PALD1Q9ULE6 856 aa19.93■□□□□ 0.78
TPR-205ENST00000474852 EIF4A2Q14240 407 aaKnown RBP19.92■□□□□ 0.78
TPR-205ENST00000474852 MPNDQ8N594 471 aa19.92■□□□□ 0.78
TPR-205ENST00000474852 GDPD2Q9HCC8 539 aa19.92■□□□□ 0.78
TPR-205ENST00000474852 NUTM2FA1L443 756 aa19.92■□□□□ 0.78
TPR-205ENST00000474852 CPS1P31327 1500 aa19.92■□□□□ 0.78
TPR-205ENST00000474852 CHL1O00533 1208 aa19.91■□□□□ 0.78
TPR-205ENST00000474852 RILPL2Q969X0 211 aa19.91■□□□□ 0.78
TPR-205ENST00000474852 HMMRO75330 724 aa19.91■□□□□ 0.78
TPR-205ENST00000474852 ANO2Q9NQ90 1003 aa19.91■□□□□ 0.78
TPR-205ENST00000474852 ZKSCAN5Q9Y2L8 839 aa19.91■□□□□ 0.78
TPR-205ENST00000474852 CPSF1Q10570 1443 aaKnown RBP19.91■□□□□ 0.78
TPR-205ENST00000474852 TRIM6-TRIM34B2RNG4 842 aa19.9■□□□□ 0.78
TPR-205ENST00000474852 HS1BP3Q53T59 392 aa19.9■□□□□ 0.78
TPR-205ENST00000474852 UPF3BQ9BZI7 483 aaKnown RBP19.9■□□□□ 0.78
TPR-205ENST00000474852 UQCRHLA0A096LP55 91 aa19.89■□□□□ 0.78
TPR-205ENST00000474852 UQCRHP07919 91 aa19.89■□□□□ 0.78
TPR-205ENST00000474852 FOXO3O43524 673 aa19.89■□□□□ 0.77
TPR-205ENST00000474852 AATKQ6ZMQ8 1374 aa19.89■□□□□ 0.77
TPR-205ENST00000474852 PTPRCP08575 1304 aa19.89■□□□□ 0.77
TPR-205ENST00000474852 ZNF500O60304 480 aaPredicted RBP19.89■□□□□ 0.77
TPR-205ENST00000474852 PTMAP06454 111 aaKnown RBP19.89■□□□□ 0.77
TPR-205ENST00000474852 HAP1P54257 671 aaPredicted RBP19.88■□□□□ 0.77
TPR-205ENST00000474852 NECTIN2Q92692 538 aa19.88■□□□□ 0.77
TPR-205ENST00000474852 HSP90AB2PQ58FF8 381 aa19.88■□□□□ 0.77
TPR-205ENST00000474852 ESYT1Q9BSJ8 1104 aa19.87■□□□□ 0.77
TPR-205ENST00000474852 CCDC61Q9Y6R9 512 aa19.87■□□□□ 0.77
TPR-205ENST00000474852 BRD1O95696 1058 aa19.86■□□□□ 0.77
TPR-205ENST00000474852 MBD3O95983 291 aa19.86■□□□□ 0.77
TPR-205ENST00000474852 MLECQ14165 292 aa19.86■□□□□ 0.77
TPR-205ENST00000474852 NEO1Q92859 1461 aa19.85■□□□□ 0.77
TPR-205ENST00000474852 GADD45BO75293 160 aaPredicted RBP19.85■□□□□ 0.77
TPR-205ENST00000474852 CCDC39Q9UFE4 941 aa19.85■□□□□ 0.77
TPR-205ENST00000474852 TSPYL4Q9UJ04 414 aa19.85■□□□□ 0.77
TPR-205ENST00000474852 PODXL2Q9NZ53 605 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms