RNA–Protein interactions for RNA: ENST00000474249.5

GAPDH-208, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-208ENST00000474249 TUBGCP6Q96RT7 1819 aa18.8■□□□□ 0.6
GAPDH-208ENST00000474249 LTV1Q96GA3 475 aaPredicted RBP18.79■□□□□ 0.6
GAPDH-208ENST00000474249 MEGF6O75095 1541 aa18.79■□□□□ 0.6
GAPDH-208ENST00000474249 ZCRB1Q8TBF4 217 aaKnown RBP18.78■□□□□ 0.6
GAPDH-208ENST00000474249 RGPD2P0DJD1 1756 aa18.78■□□□□ 0.6
GAPDH-208ENST00000474249 GPR162Q16538 588 aa18.77■□□□□ 0.6
GAPDH-208ENST00000474249 NLGN2Q8NFZ4 835 aa18.77■□□□□ 0.6
GAPDH-208ENST00000474249 TFCP2L1Q9NZI6 479 aa18.77■□□□□ 0.6
GAPDH-208ENST00000474249 ST20-MTHFSA0A0A6YYL1 179 aa18.76■□□□□ 0.59
GAPDH-208ENST00000474249 NBPF6Q5VWK0 638 aa18.76■□□□□ 0.59
GAPDH-208ENST00000474249 COG3Q96JB2 828 aa18.76■□□□□ 0.59
GAPDH-208ENST00000474249 NBPF4Q96M43 638 aa18.76■□□□□ 0.59
GAPDH-208ENST00000474249 DOT1LQ8TEK3 1739 aa18.76■□□□□ 0.59
GAPDH-208ENST00000474249 POLD1P28340 1107 aa18.75■□□□□ 0.59
GAPDH-208ENST00000474249 FYB1O15117 783 aa18.74■□□□□ 0.59
GAPDH-208ENST00000474249 COL23A1Q86Y22 540 aaPredicted RBP18.74■□□□□ 0.59
GAPDH-208ENST00000474249 AMPHP49418 695 aa18.74■□□□□ 0.59
GAPDH-208ENST00000474249 SYTL4Q96C24 671 aaPredicted RBP18.74■□□□□ 0.59
GAPDH-208ENST00000474249 RTL1A6NKG5 1358 aa18.73■□□□□ 0.59
GAPDH-208ENST00000474249 YBX3P16989 372 aaKnown RBP eCLIP18.73■□□□□ 0.591e-62■■□□□ 11.9
GAPDH-208ENST00000474249 CCNL1Q9UK58 526 aaPredicted RBP18.73■□□□□ 0.59
GAPDH-208ENST00000474249 CGNL1Q0VF96 1302 aa18.72■□□□□ 0.59
GAPDH-208ENST00000474249 SENP3-EIF4A1A0A087X0R7 540 aa18.71■□□□□ 0.59
GAPDH-208ENST00000474249 SLC24A1O60721 1099 aa18.71■□□□□ 0.59
GAPDH-208ENST00000474249 RRS1Q15050 365 aaKnown RBP18.71■□□□□ 0.59
GAPDH-208ENST00000474249 TONSLQ96HA7 1378 aa18.69■□□□□ 0.58
GAPDH-208ENST00000474249 USP47Q96K76 1375 aa18.68■□□□□ 0.58
GAPDH-208ENST00000474249 HSP90AB2PQ58FF8 381 aa18.68■□□□□ 0.58
GAPDH-208ENST00000474249 USHBP1Q8N6Y0 703 aa18.68■□□□□ 0.58
GAPDH-208ENST00000474249 GGNBP2Q9H3C7 697 aa18.68■□□□□ 0.58
GAPDH-208ENST00000474249 KLHL34Q8N239 644 aa18.67■□□□□ 0.58
GAPDH-208ENST00000474249 INSRP06213 1382 aa18.67■□□□□ 0.58
GAPDH-208ENST00000474249 CYP27B1O15528 508 aa18.66■□□□□ 0.58
GAPDH-208ENST00000474249 GRIN3BO60391 1043 aa18.66■□□□□ 0.58
GAPDH-208ENST00000474249 AMIGO3Q86WK7 504 aa18.65■□□□□ 0.58
GAPDH-208ENST00000474249 TAF1LQ8IZX4 1826 aa18.65■□□□□ 0.58
GAPDH-208ENST00000474249 CD2APQ9Y5K6 639 aa18.65■□□□□ 0.58
GAPDH-208ENST00000474249 KIF24Q5T7B8 1368 aa18.64■□□□□ 0.57
GAPDH-208ENST00000474249 GIGYF1O75420 1035 aaPredicted RBP18.64■□□□□ 0.57
GAPDH-208ENST00000474249 PELP1Q8IZL8 1130 aaKnown RBP18.64■□□□□ 0.57
GAPDH-208ENST00000474249 RAPGEF4Q8WZA2 1011 aa18.64■□□□□ 0.57
GAPDH-208ENST00000474249 C5P01031 1676 aa18.63■□□□□ 0.57
GAPDH-208ENST00000474249 NCAPD2Q15021 1401 aa18.63■□□□□ 0.57
GAPDH-208ENST00000474249 TATP17735 454 aaPredicted RBP18.63■□□□□ 0.57
GAPDH-208ENST00000474249 PALLDQ8WX93 1383 aa18.62■□□□□ 0.57
GAPDH-208ENST00000474249 PCDH11XQ9BZA7 1347 aa18.62■□□□□ 0.57
GAPDH-208ENST00000474249 PCDH11YQ9BZA8 1340 aa18.62■□□□□ 0.57
GAPDH-208ENST00000474249 NKX1-1Q15270 411 aaPredicted RBP18.62■□□□□ 0.57
GAPDH-208ENST00000474249 MSL1Q68DK7 614 aa18.62■□□□□ 0.57
GAPDH-208ENST00000474249 CARD14Q9BXL6 1004 aa18.62■□□□□ 0.57
GAPDH-208ENST00000474249 FLAD1Q8NFF5 587 aa18.61■□□□□ 0.57
GAPDH-208ENST00000474249 TOGARAM1Q9Y4F4 1720 aa18.61■□□□□ 0.57
GAPDH-208ENST00000474249 FLT4P35916 1363 aa18.6■□□□□ 0.57
GAPDH-208ENST00000474249 MSH5O43196 834 aa18.6■□□□□ 0.57
GAPDH-208ENST00000474249 ADCY9O60503 1353 aa18.6■□□□□ 0.57
GAPDH-208ENST00000474249 HMGB2P26583 209 aaKnown RBP18.59■□□□□ 0.57
GAPDH-208ENST00000474249 TMF1P82094 1093 aa18.59■□□□□ 0.57
GAPDH-208ENST00000474249 MPRIPQ6WCQ1 1025 aa18.59■□□□□ 0.57
GAPDH-208ENST00000474249 PIGBQ92521 554 aa18.59■□□□□ 0.57
GAPDH-208ENST00000474249 SMG6Q86US8 1419 aaKnown RBP18.59■□□□□ 0.57
GAPDH-208ENST00000474249 MAP2P11137 1827 aaKnown RBP18.59■□□□□ 0.57
GAPDH-208ENST00000474249 ITGB4P16144 1822 aa18.59■□□□□ 0.57
GAPDH-208ENST00000474249 C4BP0C0L5 1744 aa18.58■□□□□ 0.56
GAPDH-208ENST00000474249 PKD1L3Q7Z443 1732 aa18.58■□□□□ 0.56
GAPDH-208ENST00000474249 ATP10DQ9P241 1426 aa18.57■□□□□ 0.56
GAPDH-208ENST00000474249 UBR3Q6ZT12 1888 aa18.56■□□□□ 0.56
GAPDH-208ENST00000474249 SMIM5Q71RC9 77 aa18.56■□□□□ 0.56
GAPDH-208ENST00000474249 SMARCC1Q92922 1105 aaPredicted RBP18.56■□□□□ 0.56
GAPDH-208ENST00000474249 EMILIN1Q9Y6C2 1016 aa18.56■□□□□ 0.56
GAPDH-208ENST00000474249 KIF20BQ96Q89 1820 aa18.55■□□□□ 0.56
GAPDH-208ENST00000474249 WASHC2AQ641Q2 1341 aa18.54■□□□□ 0.56
GAPDH-208ENST00000474249 LINC00116Q8NCU8 138 aa18.53■□□□□ 0.56
GAPDH-208ENST00000474249 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.53■□□□□ 0.56
GAPDH-208ENST00000474249 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.52■□□□□ 0.56
GAPDH-208ENST00000474249 ANKRD26Q9UPS8 1709 aa18.52■□□□□ 0.56
GAPDH-208ENST00000474249 LOC102724428A0A0B4J2F2 783 aa18.51■□□□□ 0.55
GAPDH-208ENST00000474249 SSFA2P28290 1259 aa18.51■□□□□ 0.55
GAPDH-208ENST00000474249 SIK1P57059 783 aa18.51■□□□□ 0.55
GAPDH-208ENST00000474249 ITPK1Q13572 414 aa18.51■□□□□ 0.55
GAPDH-208ENST00000474249 AK7Q96M32 723 aa18.51■□□□□ 0.55
GAPDH-208ENST00000474249 EYA1Q99502 592 aa18.51■□□□□ 0.55
GAPDH-208ENST00000474249 CDCA8Q53HL2 280 aa18.5■□□□□ 0.55
GAPDH-208ENST00000474249 IFFO2Q5TF58 517 aa18.5■□□□□ 0.55
GAPDH-208ENST00000474249 ASAP1Q9ULH1 1129 aa18.5■□□□□ 0.55
GAPDH-208ENST00000474249 SPG7Q9UQ90 795 aa18.49■□□□□ 0.55
GAPDH-208ENST00000474249 IGSF1Q8N6C5 1336 aa18.49■□□□□ 0.55
GAPDH-208ENST00000474249 NSD3Q9BZ95 1437 aa18.49■□□□□ 0.55
GAPDH-208ENST00000474249 GPBP1L1Q9HC44 474 aaPredicted RBP18.49■□□□□ 0.55
GAPDH-208ENST00000474249 POLKQ9UBT6 870 aa18.49■□□□□ 0.55
GAPDH-208ENST00000474249 PHF14O94880 888 aa18.48■□□□□ 0.55
GAPDH-208ENST00000474249 PHKG2P15735 406 aa18.48■□□□□ 0.55
GAPDH-208ENST00000474249 ATG3Q9NT62 314 aa18.48■□□□□ 0.55
GAPDH-208ENST00000474249 SLC4A9Q96Q91 983 aa18.47■□□□□ 0.55
GAPDH-208ENST00000474249 CICQ96RK0 1608 aaPredicted RBP18.45■□□□□ 0.54
GAPDH-208ENST00000474249 PLEKHG2Q9H7P9 1386 aa18.45■□□□□ 0.54
GAPDH-208ENST00000474249 KIF3CO14782 793 aa18.45■□□□□ 0.54
GAPDH-208ENST00000474249 HSPA6P17066 643 aa18.45■□□□□ 0.54
GAPDH-208ENST00000474249 IFNL2Q8IZJ0 200 aa18.45■□□□□ 0.54
GAPDH-208ENST00000474249 TMOD3Q9NYL9 352 aa18.45■□□□□ 0.54
GAPDH-208ENST00000474249 KDRP35968 1356 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms