RNA–Protein interactions for RNA: ENST00000474178.1

RAB3GAP2-204, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

TSL 4

Gene RAB3GAP2, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-204ENST00000474178 TAF1LQ8IZX4 1826 aa14.43□□□□□ -0.1
RAB3GAP2-204ENST00000474178 C5P01031 1676 aa14.43□□□□□ -0.1
RAB3GAP2-204ENST00000474178 MSL1Q68DK7 614 aa14.43□□□□□ -0.1
RAB3GAP2-204ENST00000474178 ANKRD24Q8TF21 1146 aa14.43□□□□□ -0.1
RAB3GAP2-204ENST00000474178 USP31Q70CQ4 1352 aa14.43□□□□□ -0.1
RAB3GAP2-204ENST00000474178 EVC2Q86UK5 1308 aa14.42□□□□□ -0.1
RAB3GAP2-204ENST00000474178 DDX54Q8TDD1 881 aaKnown RBP14.42□□□□□ -0.1
RAB3GAP2-204ENST00000474178 KTN1Q86UP2 1357 aaKnown RBP14.42□□□□□ -0.1
RAB3GAP2-204ENST00000474178 CD163L1Q9NR16 1453 aa14.42□□□□□ -0.1
RAB3GAP2-204ENST00000474178 PRIM1P49642 420 aaKnown RBP14.41□□□□□ -0.1
RAB3GAP2-204ENST00000474178 ANKRD36BQ8N2N9 1353 aa14.41□□□□□ -0.1
RAB3GAP2-204ENST00000474178 TOGARAM1Q9Y4F4 1720 aa14.41□□□□□ -0.1
RAB3GAP2-204ENST00000474178 NME9Q86XW9 330 aa14.4□□□□□ -0.1
RAB3GAP2-204ENST00000474178 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.4□□□□□ -0.14e-6■■■■□ 21.1
RAB3GAP2-204ENST00000474178 SBNO2Q9Y2G9 1366 aa14.39□□□□□ -0.11
RAB3GAP2-204ENST00000474178 KIF3CO14782 793 aa14.39□□□□□ -0.11
RAB3GAP2-204ENST00000474178 MAPK8IP2Q13387 824 aaPredicted RBP14.39□□□□□ -0.11
RAB3GAP2-204ENST00000474178 SYTL4Q96C24 671 aaPredicted RBP14.38□□□□□ -0.11
RAB3GAP2-204ENST00000474178 CCNL1Q9UK58 526 aaPredicted RBP14.37□□□□□ -0.11
RAB3GAP2-204ENST00000474178 DNAJC5GQ8N7S2 189 aa14.36□□□□□ -0.11
RAB3GAP2-204ENST00000474178 WWC3Q9ULE0 1092 aa14.36□□□□□ -0.11
RAB3GAP2-204ENST00000474178 CD2APQ9Y5K6 639 aa14.36□□□□□ -0.11
RAB3GAP2-204ENST00000474178 MEGF6O75095 1541 aa14.36□□□□□ -0.11
RAB3GAP2-204ENST00000474178 UBR3Q6ZT12 1888 aa14.35□□□□□ -0.11
RAB3GAP2-204ENST00000474178 CICQ96RK0 1608 aaPredicted RBP14.35□□□□□ -0.11
RAB3GAP2-204ENST00000474178 AMIGO3Q86WK7 504 aa14.35□□□□□ -0.11
RAB3GAP2-204ENST00000474178 WDR90Q96KV7 1748 aa14.35□□□□□ -0.11
RAB3GAP2-204ENST00000474178 KIAA1551Q9HCM1 1747 aa14.35□□□□□ -0.11
RAB3GAP2-204ENST00000474178 LTV1Q96GA3 475 aaPredicted RBP14.34□□□□□ -0.11
RAB3GAP2-204ENST00000474178 C4BP0C0L5 1744 aa14.34□□□□□ -0.11
RAB3GAP2-204ENST00000474178 IGSF1Q8N6C5 1336 aa14.33□□□□□ -0.12
RAB3GAP2-204ENST00000474178 ITGB4P16144 1822 aa14.32□□□□□ -0.12
RAB3GAP2-204ENST00000474178 SMIM5Q71RC9 77 aa14.32□□□□□ -0.12
RAB3GAP2-204ENST00000474178 IP6K1Q92551 441 aa14.32□□□□□ -0.12
RAB3GAP2-204ENST00000474178 ZBTB22O15209 634 aa14.31□□□□□ -0.12
RAB3GAP2-204ENST00000474178 N4BP2Q86UW6 1770 aaPredicted RBP14.31□□□□□ -0.12
RAB3GAP2-204ENST00000474178 USP47Q96K76 1375 aa14.31□□□□□ -0.12
RAB3GAP2-204ENST00000474178 KIF13BQ9NQT8 1826 aa14.3□□□□□ -0.12
RAB3GAP2-204ENST00000474178 FBLN1P23142 703 aa14.3□□□□□ -0.12
RAB3GAP2-204ENST00000474178 APLP1P51693 650 aa14.3□□□□□ -0.12
RAB3GAP2-204ENST00000474178 ZCRB1Q8TBF4 217 aaKnown RBP14.3□□□□□ -0.12
RAB3GAP2-204ENST00000474178 L3MBTL2Q969R5 705 aa14.3□□□□□ -0.12
RAB3GAP2-204ENST00000474178 MAP2P11137 1827 aaKnown RBP14.29□□□□□ -0.12
RAB3GAP2-204ENST00000474178 EDC4Q6P2E9 1401 aaKnown RBP14.29□□□□□ -0.12
RAB3GAP2-204ENST00000474178 COL13A1Q5TAT6 717 aaPredicted RBP14.28□□□□□ -0.12
RAB3GAP2-204ENST00000474178 SLC12A5Q9H2X9 1139 aa14.28□□□□□ -0.12
RAB3GAP2-204ENST00000474178 A0A1W2PP64 1363 aa14.27□□□□□ -0.12
RAB3GAP2-204ENST00000474178 ROCK2O75116 1388 aaKnown RBP14.27□□□□□ -0.12
RAB3GAP2-204ENST00000474178 BRCA1P38398 1863 aaKnown RBP14.27□□□□□ -0.13
RAB3GAP2-204ENST00000474178 PALLDQ8WX93 1383 aa14.26□□□□□ -0.13
RAB3GAP2-204ENST00000474178 MAP3K19Q56UN5 1328 aa14.26□□□□□ -0.13
RAB3GAP2-204ENST00000474178 HOXC9P31274 260 aa14.26□□□□□ -0.13
RAB3GAP2-204ENST00000474178 HTRA3P83110 453 aa14.26□□□□□ -0.13
RAB3GAP2-204ENST00000474178 RNF216Q9NWF9 866 aaPredicted RBP14.26□□□□□ -0.13
RAB3GAP2-204ENST00000474178 TOMM70O94826 608 aa14.25□□□□□ -0.13
RAB3GAP2-204ENST00000474178 CAPN15O75808 1086 aa14.24□□□□□ -0.13
RAB3GAP2-204ENST00000474178 NBPF6Q5VWK0 638 aa14.24□□□□□ -0.13
RAB3GAP2-204ENST00000474178 USHBP1Q8N6Y0 703 aa14.24□□□□□ -0.13
RAB3GAP2-204ENST00000474178 FLAD1Q8NFF5 587 aa14.24□□□□□ -0.13
RAB3GAP2-204ENST00000474178 TMC1Q8TDI8 760 aa14.24□□□□□ -0.13
RAB3GAP2-204ENST00000474178 NBPF4Q96M43 638 aa14.24□□□□□ -0.13
RAB3GAP2-204ENST00000474178 NMRK2Q9NPI5 230 aa14.24□□□□□ -0.13
RAB3GAP2-204ENST00000474178 PXDNLA1KZ92 1463 aa14.24□□□□□ -0.13
RAB3GAP2-204ENST00000474178 PHF14O94880 888 aa14.23□□□□□ -0.13
RAB3GAP2-204ENST00000474178 HDGFL2Q7Z4V5 671 aaPredicted RBP14.23□□□□□ -0.13
RAB3GAP2-204ENST00000474178 PKD1L3Q7Z443 1732 aa14.22□□□□□ -0.13
RAB3GAP2-204ENST00000474178 JMYQ8N9B5 988 aa14.22□□□□□ -0.13
RAB3GAP2-204ENST00000474178 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.21□□□□□ -0.13
RAB3GAP2-204ENST00000474178 KLRG1Q96E93 195 aa14.21□□□□□ -0.13
RAB3GAP2-204ENST00000474178 MPRIPQ6WCQ1 1025 aa14.2□□□□□ -0.14
RAB3GAP2-204ENST00000474178 AK7Q96M32 723 aa14.2□□□□□ -0.14
RAB3GAP2-204ENST00000474178 SIN3AQ96ST3 1273 aa14.2□□□□□ -0.14
RAB3GAP2-204ENST00000474178 ARFGEF1Q9Y6D6 1849 aa14.2□□□□□ -0.14
RAB3GAP2-204ENST00000474178 AMPHP49418 695 aa14.19□□□□□ -0.14
RAB3GAP2-204ENST00000474178 LINC00116Q8NCU8 138 aa14.19□□□□□ -0.14
RAB3GAP2-204ENST00000474178 CYP27B1O15528 508 aa14.18□□□□□ -0.14
RAB3GAP2-204ENST00000474178 RRS1Q15050 365 aaKnown RBP14.18□□□□□ -0.14
RAB3GAP2-204ENST00000474178 CGNL1Q0VF96 1302 aa14.17□□□□□ -0.14
RAB3GAP2-204ENST00000474178 SBF1O95248 1867 aa14.17□□□□□ -0.14
RAB3GAP2-204ENST00000474178 SSFA2P28290 1259 aa14.17□□□□□ -0.14
RAB3GAP2-204ENST00000474178 PRELPP51888 382 aa14.17□□□□□ -0.14
RAB3GAP2-204ENST00000474178 RBM46Q8TBY0 533 aaKnown RBP14.17□□□□□ -0.14
RAB3GAP2-204ENST00000474178 TERF2IPQ9NYB0 399 aa14.17□□□□□ -0.14
RAB3GAP2-204ENST00000474178 RTL1A6NKG5 1358 aa14.17□□□□□ -0.14
RAB3GAP2-204ENST00000474178 PCDH11XQ9BZA7 1347 aa14.16□□□□□ -0.14
RAB3GAP2-204ENST00000474178 PCDH11YQ9BZA8 1340 aa14.16□□□□□ -0.14
RAB3GAP2-204ENST00000474178 C10orf71Q711Q0 1435 aa14.16□□□□□ -0.14
RAB3GAP2-204ENST00000474178 A0A0G2JLW4 131 aa14.16□□□□□ -0.14
RAB3GAP2-204ENST00000474178 ITPK1Q13572 414 aa14.16□□□□□ -0.14
RAB3GAP2-204ENST00000474178 PIGBQ92521 554 aa14.16□□□□□ -0.14
RAB3GAP2-204ENST00000474178 COG3Q96JB2 828 aa14.16□□□□□ -0.14
RAB3GAP2-204ENST00000474178 BCS1LQ9Y276 419 aa14.16□□□□□ -0.14
RAB3GAP2-204ENST00000474178 NSD3Q9BZ95 1437 aa14.15□□□□□ -0.14
RAB3GAP2-204ENST00000474178 KCPQ6ZWJ8 1503 aa14.15□□□□□ -0.14
RAB3GAP2-204ENST00000474178 C4AP0C0L4 1744 aa14.15□□□□□ -0.14
RAB3GAP2-204ENST00000474178 MMP10P09238 476 aa14.15□□□□□ -0.14
RAB3GAP2-204ENST00000474178 TATP17735 454 aaPredicted RBP14.15□□□□□ -0.14
RAB3GAP2-204ENST00000474178 TNS4Q8IZW8 715 aa14.15□□□□□ -0.14
RAB3GAP2-204ENST00000474178 RAPGEF4Q8WZA2 1011 aa14.15□□□□□ -0.14
RAB3GAP2-204ENST00000474178 FOXD4L1Q9NU39 408 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms