RNA–Protein interactions for RNA: ENST00000474128.1

LAMA5-208, Transcript of laminin subunit alpha 5, humanhuman

TSL 3

Gene LAMA5, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-208ENST00000474128 MEGF6O75095 1541 aa24.18■■□□□ 1.46
LAMA5-208ENST00000474128 CGNL1Q0VF96 1302 aa24.16■■□□□ 1.46
LAMA5-208ENST00000474128 TRIM26Q12899 539 aaPredicted RBP24.16■■□□□ 1.46
LAMA5-208ENST00000474128 NBPF6Q5VWK0 638 aa24.16■■□□□ 1.46
LAMA5-208ENST00000474128 SLC16A10Q8TF71 515 aa24.16■■□□□ 1.46
LAMA5-208ENST00000474128 NBPF4Q96M43 638 aa24.16■■□□□ 1.46
LAMA5-208ENST00000474128 SMG6Q86US8 1419 aaKnown RBP24.16■■□□□ 1.46
LAMA5-208ENST00000474128 RGPD2P0DJD1 1756 aa24.16■■□□□ 1.46
LAMA5-208ENST00000474128 MAP3K5Q99683 1374 aa24.16■■□□□ 1.46
LAMA5-208ENST00000474128 DOT1LQ8TEK3 1739 aa24.15■■□□□ 1.46
LAMA5-208ENST00000474128 NSD2O96028 1365 aa24.15■■□□□ 1.46
LAMA5-208ENST00000474128 SHANK3Q9BYB0 1731 aa24.14■■□□□ 1.45
LAMA5-208ENST00000474128 RAPGEF4Q8WZA2 1011 aa24.13■■□□□ 1.45
LAMA5-208ENST00000474128 TFCP2L1Q9NZI6 479 aa24.13■■□□□ 1.45
LAMA5-208ENST00000474128 QSER1Q2KHR3 1735 aa24.13■■□□□ 1.45
LAMA5-208ENST00000474128 PNPLA7Q6ZV29 1317 aa24.12■■□□□ 1.45
LAMA5-208ENST00000474128 UTRNP46939 3433 aa24.11■■□□□ 1.45
LAMA5-208ENST00000474128 KCNQ4P56696 695 aa24.11■■□□□ 1.45
LAMA5-208ENST00000474128 USHBP1Q8N6Y0 703 aa24.11■■□□□ 1.45
LAMA5-208ENST00000474128 INSRP06213 1382 aa24.11■■□□□ 1.45
LAMA5-208ENST00000474128 KIF24Q5T7B8 1368 aa24.11■■□□□ 1.45
LAMA5-208ENST00000474128 TATP17735 454 aaPredicted RBP24.1■■□□□ 1.45
LAMA5-208ENST00000474128 POLD1P28340 1107 aa24.1■■□□□ 1.45
LAMA5-208ENST00000474128 FLT4P35916 1363 aa24.1■■□□□ 1.45
LAMA5-208ENST00000474128 LY75O60449 1722 aa24.1■■□□□ 1.45
LAMA5-208ENST00000474128 HSP90AB2PQ58FF8 381 aa24.09■■□□□ 1.45
LAMA5-208ENST00000474128 CCNL1Q9UK58 526 aaPredicted RBP24.09■■□□□ 1.45
LAMA5-208ENST00000474128 KIF20BQ96Q89 1820 aa24.08■■□□□ 1.45
LAMA5-208ENST00000474128 PCDH11XQ9BZA7 1347 aa24.07■■□□□ 1.44
LAMA5-208ENST00000474128 PCDH11YQ9BZA8 1340 aa24.07■■□□□ 1.44
LAMA5-208ENST00000474128 ZNF784Q8NCA9 323 aaPredicted RBP24.05■■□□□ 1.44
LAMA5-208ENST00000474128 CARD14Q9BXL6 1004 aa24.05■■□□□ 1.44
LAMA5-208ENST00000474128 COL24A1Q17RW2 1714 aa24.04■■□□□ 1.44
LAMA5-208ENST00000474128 TIMELESSQ9UNS1 1208 aa24.04■■□□□ 1.44
LAMA5-208ENST00000474128 TUBGCP6Q96RT7 1819 aa24.04■■□□□ 1.44
LAMA5-208ENST00000474128 NSD3Q9BZ95 1437 aa24.03■■□□□ 1.44
LAMA5-208ENST00000474128 HMGB2P26583 209 aaKnown RBP24.02■■□□□ 1.44
LAMA5-208ENST00000474128 GPR162Q16538 588 aa24.02■■□□□ 1.44
LAMA5-208ENST00000474128 KLHL34Q8N239 644 aa24.02■■□□□ 1.44
LAMA5-208ENST00000474128 CHD4Q14839 1912 aa24.02■■□□□ 1.44
LAMA5-208ENST00000474128 EMILIN1Q9Y6C2 1016 aa24.01■■□□□ 1.43
LAMA5-208ENST00000474128 CYP27B1O15528 508 aa23.99■■□□□ 1.43
LAMA5-208ENST00000474128 MSH5O43196 834 aa23.99■■□□□ 1.43
LAMA5-208ENST00000474128 COL23A1Q86Y22 540 aaPredicted RBP23.99■■□□□ 1.43
LAMA5-208ENST00000474128 PALLDQ8WX93 1383 aa23.98■■□□□ 1.43
LAMA5-208ENST00000474128 MPRIPQ6WCQ1 1025 aa23.97■■□□□ 1.43
LAMA5-208ENST00000474128 NCAPD2Q15021 1401 aa23.96■■□□□ 1.43
LAMA5-208ENST00000474128 PPM1GO15355 546 aaPredicted RBP23.96■■□□□ 1.43
LAMA5-208ENST00000474128 WASHC2AQ641Q2 1341 aa23.95■■□□□ 1.42
LAMA5-208ENST00000474128 CLSPNQ9HAW4 1339 aa23.94■■□□□ 1.42
LAMA5-208ENST00000474128 FLAD1Q8NFF5 587 aa23.94■■□□□ 1.42
LAMA5-208ENST00000474128 NLGN2Q8NFZ4 835 aa23.94■■□□□ 1.42
LAMA5-208ENST00000474128 SMARCC1Q92922 1105 aaPredicted RBP23.94■■□□□ 1.42
LAMA5-208ENST00000474128 C5P01031 1676 aa23.94■■□□□ 1.42
LAMA5-208ENST00000474128 PKD1L3Q7Z443 1732 aa23.93■■□□□ 1.42
LAMA5-208ENST00000474128 PELP1Q8IZL8 1130 aaKnown RBP23.93■■□□□ 1.42
LAMA5-208ENST00000474128 SPG7Q9UQ90 795 aa23.93■■□□□ 1.42
LAMA5-208ENST00000474128 ANKRD26Q9UPS8 1709 aa23.93■■□□□ 1.42
LAMA5-208ENST00000474128 NKX1-1Q15270 411 aaPredicted RBP23.92■■□□□ 1.42
LAMA5-208ENST00000474128 TOGARAM1Q9Y4F4 1720 aa23.9■■□□□ 1.42
LAMA5-208ENST00000474128 MSL1Q68DK7 614 aa23.9■■□□□ 1.42
LAMA5-208ENST00000474128 EYA1Q99502 592 aa23.9■■□□□ 1.42
LAMA5-208ENST00000474128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.9■■□□□ 1.42
LAMA5-208ENST00000474128 TAF1LQ8IZX4 1826 aa23.89■■□□□ 1.42
LAMA5-208ENST00000474128 PIGBQ92521 554 aa23.89■■□□□ 1.41
LAMA5-208ENST00000474128 POLKQ9UBT6 870 aa23.89■■□□□ 1.41
LAMA5-208ENST00000474128 ITGB4P16144 1822 aa23.89■■□□□ 1.41
LAMA5-208ENST00000474128 GOLGB1Q14789 3259 aaKnown RBP23.88■■□□□ 1.41
LAMA5-208ENST00000474128 AK7Q96M32 723 aa23.88■■□□□ 1.41
LAMA5-208ENST00000474128 MAP2P11137 1827 aaKnown RBP23.87■■□□□ 1.41
LAMA5-208ENST00000474128 GRIN3BO60391 1043 aa23.86■■□□□ 1.41
LAMA5-208ENST00000474128 POLR3GLQ9BT43 218 aa23.86■■□□□ 1.41
LAMA5-208ENST00000474128 C4BP0C0L5 1744 aa23.86■■□□□ 1.41
LAMA5-208ENST00000474128 CD2APQ9Y5K6 639 aa23.85■■□□□ 1.41
LAMA5-208ENST00000474128 IFNL2Q8IZJ0 200 aa23.84■■□□□ 1.41
LAMA5-208ENST00000474128 PCGF6Q9BYE7 350 aa23.84■■□□□ 1.41
LAMA5-208ENST00000474128 TMOD3Q9NYL9 352 aa23.84■■□□□ 1.41
LAMA5-208ENST00000474128 PLEKHG2Q9H7P9 1386 aa23.83■■□□□ 1.41
LAMA5-208ENST00000474128 LOC102724428A0A0B4J2F2 783 aa23.83■■□□□ 1.41
LAMA5-208ENST00000474128 PHKG2P15735 406 aa23.83■■□□□ 1.41
LAMA5-208ENST00000474128 YBX3P16989 372 aaKnown RBP eCLIP23.83■■□□□ 1.41
LAMA5-208ENST00000474128 SIK1P57059 783 aa23.83■■□□□ 1.41
LAMA5-208ENST00000474128 C1QTNF8P60827 252 aa23.82■■□□□ 1.4
LAMA5-208ENST00000474128 EIF4A2Q14240 407 aaKnown RBP23.82■■□□□ 1.4
LAMA5-208ENST00000474128 SSFA2P28290 1259 aa23.81■■□□□ 1.4
LAMA5-208ENST00000474128 TNNT2P45379 298 aaPredicted RBP23.81■■□□□ 1.4
LAMA5-208ENST00000474128 AMIGO3Q86WK7 504 aa23.81■■□□□ 1.4
LAMA5-208ENST00000474128 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.8■■□□□ 1.4
LAMA5-208ENST00000474128 PHF14O94880 888 aa23.8■■□□□ 1.4
LAMA5-208ENST00000474128 EIF4G2P78344 907 aaKnown RBP eCLIP23.8■■□□□ 1.49e-7■■■■■ 34.1
LAMA5-208ENST00000474128 LINC00116Q8NCU8 138 aa23.79■■□□□ 1.4
LAMA5-208ENST00000474128 ASAP1Q9ULH1 1129 aa23.79■■□□□ 1.4
LAMA5-208ENST00000474128 UBR3Q6ZT12 1888 aa23.79■■□□□ 1.4
LAMA5-208ENST00000474128 IGSF1Q8N6C5 1336 aa23.77■■□□□ 1.4
LAMA5-208ENST00000474128 GIGYF1O75420 1035 aaPredicted RBP23.76■■□□□ 1.39
LAMA5-208ENST00000474128 HSPA5P11021 654 aaKnown RBP23.76■■□□□ 1.39
LAMA5-208ENST00000474128 ATP6V1AP38606 617 aa23.76■■□□□ 1.39
LAMA5-208ENST00000474128 SMIM5Q71RC9 77 aa23.76■■□□□ 1.39
LAMA5-208ENST00000474128 PANK3Q9H999 370 aa23.76■■□□□ 1.39
LAMA5-208ENST00000474128 ATG3Q9NT62 314 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms