RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 WWC1Q8IX03 1113 aa13.39□□□□□ -0.27
PRPF38A-202ENST00000474048 C8orf37Q96NL8 207 aa13.39□□□□□ -0.27
PRPF38A-202ENST00000474048 PLEKHG2Q9H7P9 1386 aa13.39□□□□□ -0.27
PRPF38A-202ENST00000474048 ZNF530Q6P9A1 599 aaPredicted RBP13.38□□□□□ -0.27
PRPF38A-202ENST00000474048 PHACTR3Q96KR7 559 aa13.38□□□□□ -0.27
PRPF38A-202ENST00000474048 CARD10Q9BWT7 1032 aa13.38□□□□□ -0.27
PRPF38A-202ENST00000474048 MAP3K5Q99683 1374 aa13.37□□□□□ -0.27
PRPF38A-202ENST00000474048 GNAT3A8MTJ3 354 aa13.37□□□□□ -0.27
PRPF38A-202ENST00000474048 USP35Q9P2H5 1018 aa13.37□□□□□ -0.27
PRPF38A-202ENST00000474048 NCAPD2Q15021 1401 aa13.37□□□□□ -0.27
PRPF38A-202ENST00000474048 IL2RBP14784 551 aa13.36□□□□□ -0.27
PRPF38A-202ENST00000474048 MTHFSDQ2M296 383 aaKnown RBP13.36□□□□□ -0.27
PRPF38A-202ENST00000474048 LARP1Q6PKG0 1096 aaKnown RBP13.36□□□□□ -0.27
PRPF38A-202ENST00000474048 LAS1LQ9Y4W2 734 aaKnown RBP13.36□□□□□ -0.27
PRPF38A-202ENST00000474048 NRAPQ86VF7 1730 aa13.36□□□□□ -0.27
PRPF38A-202ENST00000474048 HTATSF1O43719 755 aaKnown RBP13.35□□□□□ -0.27
PRPF38A-202ENST00000474048 NEFLP07196 543 aa13.35□□□□□ -0.27
PRPF38A-202ENST00000474048 IL16Q14005 1332 aa13.35□□□□□ -0.27
PRPF38A-202ENST00000474048 HSP90AB1P08238 724 aaKnown RBP13.34□□□□□ -0.27
PRPF38A-202ENST00000474048 GNAI1P63096 354 aa13.34□□□□□ -0.27
PRPF38A-202ENST00000474048 AKAP4Q5JQC9 854 aa13.34□□□□□ -0.27
PRPF38A-202ENST00000474048 CDCA7Q9BWT1 371 aaPredicted RBP13.34□□□□□ -0.27
PRPF38A-202ENST00000474048 ZNF521Q96K83 1311 aa13.34□□□□□ -0.27
PRPF38A-202ENST00000474048 PCDH11XQ9BZA7 1347 aa13.34□□□□□ -0.27
PRPF38A-202ENST00000474048 PCDH11YQ9BZA8 1340 aa13.34□□□□□ -0.27
PRPF38A-202ENST00000474048 POTEDQ86YR6 584 aa13.33□□□□□ -0.28
PRPF38A-202ENST00000474048 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.33□□□□□ -0.281e-7■■■□□ 18.3
PRPF38A-202ENST00000474048 TRIM35Q9UPQ4 493 aa13.33□□□□□ -0.28
PRPF38A-202ENST00000474048 THRAP3Q9Y2W1 955 aaKnown RBP13.33□□□□□ -0.28
PRPF38A-202ENST00000474048 PKD1L3Q7Z443 1732 aa13.33□□□□□ -0.28
PRPF38A-202ENST00000474048 WNK3Q9BYP7 1800 aa13.32□□□□□ -0.28
PRPF38A-202ENST00000474048 OVOS2A0A0G2JMS6 1433 aa13.32□□□□□ -0.28
PRPF38A-202ENST00000474048 A0A0G2JS52 829 aa13.32□□□□□ -0.28
PRPF38A-202ENST00000474048 MYT1Q01538 1121 aa13.32□□□□□ -0.28
PRPF38A-202ENST00000474048 SLFN5Q08AF3 891 aa13.32□□□□□ -0.28
PRPF38A-202ENST00000474048 TEFQ10587 303 aa13.32□□□□□ -0.28
PRPF38A-202ENST00000474048 UNC5CLQ8IV45 518 aa13.32□□□□□ -0.28
PRPF38A-202ENST00000474048 IFNL2Q8IZJ0 200 aa13.32□□□□□ -0.28
PRPF38A-202ENST00000474048 FBXO41Q8TF61 875 aa13.32□□□□□ -0.28
PRPF38A-202ENST00000474048 CDCA7LQ96GN5 454 aa13.32□□□□□ -0.28
PRPF38A-202ENST00000474048 USP21Q9UK80 565 aa13.32□□□□□ -0.28
PRPF38A-202ENST00000474048 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.32□□□□□ -0.28
PRPF38A-202ENST00000474048 MEGF6O75095 1541 aa13.32□□□□□ -0.28
PRPF38A-202ENST00000474048 SLIT2O94813 1529 aa13.32□□□□□ -0.28
PRPF38A-202ENST00000474048 LRP6O75581 1613 aa13.31□□□□□ -0.28
PRPF38A-202ENST00000474048 KCNA4P22459 653 aa13.31□□□□□ -0.28
PRPF38A-202ENST00000474048 MCM10Q7L590 875 aa13.31□□□□□ -0.28
PRPF38A-202ENST00000474048 ZCRB1Q8TBF4 217 aaKnown RBP13.31□□□□□ -0.28
PRPF38A-202ENST00000474048 IFT57Q9NWB7 429 aa13.31□□□□□ -0.28
PRPF38A-202ENST00000474048 VIRMAQ69YN4 1812 aaKnown RBP13.3□□□□□ -0.28
PRPF38A-202ENST00000474048 DCTN1Q14203 1278 aa13.29□□□□□ -0.28
PRPF38A-202ENST00000474048 THUMPD2Q9BTF0 503 aaKnown RBP13.29□□□□□ -0.28
PRPF38A-202ENST00000474048 AFF2P51816 1311 aa13.29□□□□□ -0.28
PRPF38A-202ENST00000474048 SPATA31A1Q5TZJ5 1347 aa13.29□□□□□ -0.28
PRPF38A-202ENST00000474048 EXOC5O00471 708 aa13.28□□□□□ -0.28
PRPF38A-202ENST00000474048 VPS72Q15906 364 aa13.28□□□□□ -0.28
PRPF38A-202ENST00000474048 DUSP27Q5VZP5 1158 aa13.28□□□□□ -0.28
PRPF38A-202ENST00000474048 CFAP44Q96MT7 982 aa13.28□□□□□ -0.28
PRPF38A-202ENST00000474048 TSPYL4Q9UJ04 414 aa13.28□□□□□ -0.28
PRPF38A-202ENST00000474048 SPATA31A5Q5VU36 1347 aa13.28□□□□□ -0.28
PRPF38A-202ENST00000474048 SPATA31A7Q8IWB4 1347 aa13.28□□□□□ -0.28
PRPF38A-202ENST00000474048 LRRC37A3O60309 1634 aa13.28□□□□□ -0.28
PRPF38A-202ENST00000474048 PHKG2P15735 406 aa13.27□□□□□ -0.29
PRPF38A-202ENST00000474048 MPRIPQ6WCQ1 1025 aa13.27□□□□□ -0.29
PRPF38A-202ENST00000474048 FNBP4Q8N3X1 1017 aaPredicted RBP13.27□□□□□ -0.29
PRPF38A-202ENST00000474048 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.27□□□□□ -0.29
PRPF38A-202ENST00000474048 DDX54Q8TDD1 881 aaKnown RBP13.27□□□□□ -0.29
PRPF38A-202ENST00000474048 TSR2Q969E8 191 aaKnown RBP13.27□□□□□ -0.29
PRPF38A-202ENST00000474048 DCAF5Q96JK2 942 aa13.27□□□□□ -0.29
PRPF38A-202ENST00000474048 RCAN3Q9UKA8 241 aa13.27□□□□□ -0.29
PRPF38A-202ENST00000474048 TRPC5Q9UL62 973 aaPredicted RBP13.27□□□□□ -0.29
PRPF38A-202ENST00000474048 FANCIQ9NVI1 1328 aa13.27□□□□□ -0.29
PRPF38A-202ENST00000474048 CT47B1P0C2W7 299 aaPredicted RBP13.26□□□□□ -0.29
PRPF38A-202ENST00000474048 CANXP27824 592 aaKnown RBP13.26□□□□□ -0.29
PRPF38A-202ENST00000474048 DDB1Q16531 1140 aa13.26□□□□□ -0.29
PRPF38A-202ENST00000474048 SCN11AQ9UI33 1791 aa13.26□□□□□ -0.29
PRPF38A-202ENST00000474048 TNS2Q63HR2 1409 aa13.25□□□□□ -0.29
PRPF38A-202ENST00000474048 RNMTO43148 476 aaKnown RBP13.25□□□□□ -0.29
PRPF38A-202ENST00000474048 TAF7Q15545 349 aaPredicted RBP13.25□□□□□ -0.29
PRPF38A-202ENST00000474048 BARGINQ6ZT62 677 aa13.25□□□□□ -0.29
PRPF38A-202ENST00000474048 BABAM1Q9NWV8 329 aa13.25□□□□□ -0.29
PRPF38A-202ENST00000474048 BCL9LQ86UU0 1499 aa13.24□□□□□ -0.29
PRPF38A-202ENST00000474048 CABP4P57796 275 aa13.24□□□□□ -0.29
PRPF38A-202ENST00000474048 ZNF772Q68DY9 489 aaPredicted RBP13.24□□□□□ -0.29
PRPF38A-202ENST00000474048 CHMP4AQ9BY43 222 aa13.24□□□□□ -0.29
PRPF38A-202ENST00000474048 DISP2A7MBM2 1401 aa13.23□□□□□ -0.29
PRPF38A-202ENST00000474048 BTBD11A6QL63 1104 aa13.23□□□□□ -0.29
PRPF38A-202ENST00000474048 FAM98CQ17RN3 349 aaKnown RBP13.23□□□□□ -0.29
PRPF38A-202ENST00000474048 TRMT2AQ8IZ69 625 aaKnown RBP13.23□□□□□ -0.29
PRPF38A-202ENST00000474048 TTC5Q8N0Z6 440 aa13.23□□□□□ -0.29
PRPF38A-202ENST00000474048 SPINK5Q9NQ38 1064 aaPredicted RBP13.23□□□□□ -0.29
PRPF38A-202ENST00000474048 MBIPQ9NS73 344 aa13.23□□□□□ -0.29
PRPF38A-202ENST00000474048 SUPT16HQ9Y5B9 1047 aaKnown RBP13.23□□□□□ -0.29
PRPF38A-202ENST00000474048 CEMIPQ8WUJ3 1361 aa13.22□□□□□ -0.29
PRPF38A-202ENST00000474048 EXOSC9Q06265 439 aaKnown RBP13.22□□□□□ -0.29
PRPF38A-202ENST00000474048 IL17REQ8NFR9 667 aa13.22□□□□□ -0.29
PRPF38A-202ENST00000474048 SHANK3Q9BYB0 1731 aa13.22□□□□□ -0.29
PRPF38A-202ENST00000474048 CHL1O00533 1208 aa13.21□□□□□ -0.29
PRPF38A-202ENST00000474048 CYP27B1O15528 508 aa13.21□□□□□ -0.29
PRPF38A-202ENST00000474048 ZNF428Q96B54 188 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms