RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 ARHGEF11O15085 1522 aa8.32□□□□□ -1.08
ATPAF1-204ENST00000474020 AP1G2O75843 785 aa8.31□□□□□ -1.08
ATPAF1-204ENST00000474020 SH3BP5LQ7L8J4 393 aa8.31□□□□□ -1.08
ATPAF1-204ENST00000474020 IL27Q8NEV9 243 aa8.31□□□□□ -1.08
ATPAF1-204ENST00000474020 PCMTD1Q96MG8 357 aaPredicted RBP8.31□□□□□ -1.08
ATPAF1-204ENST00000474020 SENP2Q9HC62 589 aa8.31□□□□□ -1.08
ATPAF1-204ENST00000474020 RAPGEF6Q8TEU7 1601 aa8.31□□□□□ -1.08
ATPAF1-204ENST00000474020 C11orf95C9JLR9 678 aaPredicted RBP8.3□□□□□ -1.08
ATPAF1-204ENST00000474020 ADH1CP00326 375 aa8.3□□□□□ -1.08
ATPAF1-204ENST00000474020 RFC5P40937 340 aa8.3□□□□□ -1.08
ATPAF1-204ENST00000474020 NNTQ13423 1086 aa8.3□□□□□ -1.08
ATPAF1-204ENST00000474020 C1QTNF2Q9BXJ5 285 aa8.3□□□□□ -1.08
ATPAF1-204ENST00000474020 LRRIQ1Q96JM4 1722 aa8.29□□□□□ -1.08
ATPAF1-204ENST00000474020 CAPN5O15484 640 aaPredicted RBP8.29□□□□□ -1.08
ATPAF1-204ENST00000474020 NR6A1Q15406 480 aa8.29□□□□□ -1.08
ATPAF1-204ENST00000474020 YTHDC1Q96MU7 727 aaKnown RBP8.29□□□□□ -1.08
ATPAF1-204ENST00000474020 FKBPLQ9UIM3 349 aa8.29□□□□□ -1.08
ATPAF1-204ENST00000474020 CDK13Q14004 1512 aaKnown RBP8.29□□□□□ -1.08
ATPAF1-204ENST00000474020 DISP1Q96F81 1524 aa8.29□□□□□ -1.08
ATPAF1-204ENST00000474020 ZC3H4Q9UPT8 1303 aaKnown RBP8.29□□□□□ -1.08
ATPAF1-204ENST00000474020 PDXDC2PQ6P474 469 aa8.28□□□□□ -1.08
ATPAF1-204ENST00000474020 KIFC2Q96AC6 838 aa8.28□□□□□ -1.08
ATPAF1-204ENST00000474020 NAIPQ13075 1403 aa8.28□□□□□ -1.08
ATPAF1-204ENST00000474020 GCC2Q8IWJ2 1684 aa8.27□□□□□ -1.08
ATPAF1-204ENST00000474020 ROCK1Q13464 1354 aa8.27□□□□□ -1.09
ATPAF1-204ENST00000474020 LOC100996750A0A140TA64 210 aa8.27□□□□□ -1.09
ATPAF1-204ENST00000474020 USP17L8P0C7I0 530 aa8.27□□□□□ -1.09
ATPAF1-204ENST00000474020 ARID5BQ14865 1188 aa8.27□□□□□ -1.09
ATPAF1-204ENST00000474020 TRMT44Q8IYL2 757 aaKnown RBP8.27□□□□□ -1.09
ATPAF1-204ENST00000474020 TRIM52Q96A61 297 aa8.27□□□□□ -1.09
ATPAF1-204ENST00000474020 KRTAP4-6Q9BYQ5 205 aa8.27□□□□□ -1.09
ATPAF1-204ENST00000474020 MAGI3Q5TCQ9 1506 aa8.27□□□□□ -1.09
ATPAF1-204ENST00000474020 NUP160Q12769 1436 aa8.27□□□□□ -1.09
ATPAF1-204ENST00000474020 TROQ12816 1431 aaPredicted RBP8.27□□□□□ -1.09
ATPAF1-204ENST00000474020 ITSN2Q9NZM3 1697 aa8.27□□□□□ -1.09
ATPAF1-204ENST00000474020 NUP153P49790 1475 aaKnown RBP8.26□□□□□ -1.09
ATPAF1-204ENST00000474020 RIMBP3CA6NJZ7 1639 aa8.26□□□□□ -1.09
ATPAF1-204ENST00000474020 RIMBP3BA6NNM3 1639 aa8.26□□□□□ -1.09
ATPAF1-204ENST00000474020 RIMBP3Q9UFD9 1639 aa8.26□□□□□ -1.09
ATPAF1-204ENST00000474020 MAGEB6P1A0A0J9YX57 407 aa8.26□□□□□ -1.09
ATPAF1-204ENST00000474020 NR5A1Q13285 461 aa8.26□□□□□ -1.09
ATPAF1-204ENST00000474020 TRIM47Q96LD4 638 aa8.26□□□□□ -1.09
ATPAF1-204ENST00000474020 MAP4K5Q9Y4K4 846 aa8.26□□□□□ -1.09
ATPAF1-204ENST00000474020 ARID3CA6NKF2 412 aa8.25□□□□□ -1.09
ATPAF1-204ENST00000474020 TIMP2P16035 220 aa8.25□□□□□ -1.09
ATPAF1-204ENST00000474020 GRM5P41594 1212 aa8.25□□□□□ -1.09
ATPAF1-204ENST00000474020 TMEM259Q4ZIN3 620 aa8.25□□□□□ -1.09
ATPAF1-204ENST00000474020 SIN3AQ96ST3 1273 aa8.25□□□□□ -1.09
ATPAF1-204ENST00000474020 HMX1Q9NP08 348 aaPredicted RBP8.25□□□□□ -1.09
ATPAF1-204ENST00000474020 RRP7BPQ9NSQ0 103 aa8.25□□□□□ -1.09
ATPAF1-204ENST00000474020 CEP170Q5SW79 1584 aa8.25□□□□□ -1.09
ATPAF1-204ENST00000474020 DAPK1P53355 1430 aa8.24□□□□□ -1.09
ATPAF1-204ENST00000474020 PTPRKQ15262 1439 aa8.24□□□□□ -1.09
ATPAF1-204ENST00000474020 PPP1R15AO75807 674 aaPredicted RBP8.24□□□□□ -1.09
ATPAF1-204ENST00000474020 WDR4P57081 412 aaKnown RBP8.24□□□□□ -1.09
ATPAF1-204ENST00000474020 ERFEQ4G0M1 354 aa8.24□□□□□ -1.09
ATPAF1-204ENST00000474020 TRIM46Q7Z4K8 759 aa8.24□□□□□ -1.09
ATPAF1-204ENST00000474020 ARHGAP9Q9BRR9 750 aa8.24□□□□□ -1.09
ATPAF1-204ENST00000474020 KLF16Q9BXK1 252 aaPredicted RBP8.24□□□□□ -1.09
ATPAF1-204ENST00000474020 CARD14Q9BXL6 1004 aa8.24□□□□□ -1.09
ATPAF1-204ENST00000474020 CFDP1Q9UEE9 299 aaPredicted RBP8.24□□□□□ -1.09
ATPAF1-204ENST00000474020 CHIC2Q9UKJ5 165 aa8.24□□□□□ -1.09
ATPAF1-204ENST00000474020 GTF3C3Q9Y5Q9 886 aa8.24□□□□□ -1.09
ATPAF1-204ENST00000474020 DNMT1P26358 1616 aaKnown RBP8.23□□□□□ -1.09
ATPAF1-204ENST00000474020 PLEKHD1A6NEE1 506 aa8.23□□□□□ -1.09
ATPAF1-204ENST00000474020 NR3C2P08235 984 aa8.23□□□□□ -1.09
ATPAF1-204ENST00000474020 BMP1P13497 986 aa8.23□□□□□ -1.09
ATPAF1-204ENST00000474020 PNMA1Q8ND90 353 aa8.23□□□□□ -1.09
ATPAF1-204ENST00000474020 EPS8L1Q8TE68 723 aa8.23□□□□□ -1.09
ATPAF1-204ENST00000474020 GPSM3Q9Y4H4 160 aa8.23□□□□□ -1.09
ATPAF1-204ENST00000474020 SNRPBP14678 240 aaKnown RBP8.22□□□□□ -1.09
ATPAF1-204ENST00000474020 FSHRP23945 695 aa8.22□□□□□ -1.09
ATPAF1-204ENST00000474020 PTK2Q05397 1052 aa8.22□□□□□ -1.09
ATPAF1-204ENST00000474020 VASH1Q7L8A9 365 aaPredicted RBP8.22□□□□□ -1.09
ATPAF1-204ENST00000474020 KIF14Q15058 1648 aa8.21□□□□□ -1.09
ATPAF1-204ENST00000474020 ADCY10Q96PN6 1610 aa8.21□□□□□ -1.09
ATPAF1-204ENST00000474020 ZBTB33Q86T24 672 aa8.21□□□□□ -1.1
ATPAF1-204ENST00000474020 ANKRD30AQ9BXX3 1397 aa8.21□□□□□ -1.1
ATPAF1-204ENST00000474020 ANP32CO43423 234 aa8.2□□□□□ -1.1
ATPAF1-204ENST00000474020 ZIC2O95409 532 aaPredicted RBP8.2□□□□□ -1.1
ATPAF1-204ENST00000474020 ITPKCQ96DU7 683 aa8.2□□□□□ -1.1
ATPAF1-204ENST00000474020 SLC10A4Q96EP9 437 aa8.2□□□□□ -1.1
ATPAF1-204ENST00000474020 OCSTAMPQ9BR26 566 aa8.2□□□□□ -1.1
ATPAF1-204ENST00000474020 TRIM34Q9BYJ4 488 aa8.2□□□□□ -1.1
ATPAF1-204ENST00000474020 CDV3Q9UKY7 258 aaKnown RBP8.2□□□□□ -1.1
ATPAF1-204ENST00000474020 ABCC5O15440 1437 aa8.2□□□□□ -1.1
ATPAF1-204ENST00000474020 CAMSAP2Q08AD1 1489 aa8.19□□□□□ -1.1
ATPAF1-204ENST00000474020 PLB1Q6P1J6 1458 aa8.19□□□□□ -1.1
ATPAF1-204ENST00000474020 MRPL14Q6P1L8 145 aaKnown RBP8.19□□□□□ -1.1
ATPAF1-204ENST00000474020 TREML4Q6UXN2 200 aa8.19□□□□□ -1.1
ATPAF1-204ENST00000474020 MPHOSPH9Q99550 1183 aa8.19□□□□□ -1.1
ATPAF1-204ENST00000474020 ZFAND3Q9H8U3 227 aa8.19□□□□□ -1.1
ATPAF1-204ENST00000474020 PTPRGP23470 1445 aa8.19□□□□□ -1.1
ATPAF1-204ENST00000474020 PRG4Q92954 1404 aaPredicted RBP8.19□□□□□ -1.1
ATPAF1-204ENST00000474020 ABCA8O94911 1581 aa8.18□□□□□ -1.1
ATPAF1-204ENST00000474020 ADGBQ8N7X0 1667 aa8.18□□□□□ -1.1
ATPAF1-204ENST00000474020 SCARF1Q14162 830 aa8.18□□□□□ -1.1
ATPAF1-204ENST00000474020 CCDC116Q8IYX3 515 aa8.18□□□□□ -1.1
ATPAF1-204ENST00000474020 ADAM32Q8TC27 787 aa8.18□□□□□ -1.1
ATPAF1-204ENST00000474020 ZFP42Q96MM3 310 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms