RNA–Protein interactions for RNA: ENST00000474008.1

SRCAP-204, Transcript of Snf2 related CREBBP activator protein, humanhuman

TSL 3

Gene SRCAP, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRCAP-204ENST00000474008 HDGFL2Q7Z4V5 671 aaPredicted RBP16.87■□□□□ 0.29
SRCAP-204ENST00000474008 DDX54Q8TDD1 881 aaKnown RBP16.87■□□□□ 0.29
SRCAP-204ENST00000474008 SGIP1Q9BQI5 828 aa16.87■□□□□ 0.29
SRCAP-204ENST00000474008 FHDC1Q9C0D6 1143 aaPredicted RBP16.87■□□□□ 0.29
SRCAP-204ENST00000474008 MON2Q7Z3U7 1717 aa16.87■□□□□ 0.29
SRCAP-204ENST00000474008 ST20-MTHFSA0A0A6YYL1 179 aa16.86■□□□□ 0.29
SRCAP-204ENST00000474008 NINLQ9Y2I6 1382 aa16.86■□□□□ 0.29
SRCAP-204ENST00000474008 SYT17Q9BSW7 474 aa16.85■□□□□ 0.29
SRCAP-204ENST00000474008 MYOM1P52179 1685 aa16.85■□□□□ 0.29
SRCAP-204ENST00000474008 IP6K1Q92551 441 aa16.84■□□□□ 0.29
SRCAP-204ENST00000474008 RGPD3A6NKT7 1758 aaPredicted RBP16.84■□□□□ 0.29
SRCAP-204ENST00000474008 RGPD4Q7Z3J3 1758 aa16.84■□□□□ 0.29
SRCAP-204ENST00000474008 MAP3K19Q56UN5 1328 aa16.83■□□□□ 0.28
SRCAP-204ENST00000474008 EDC4Q6P2E9 1401 aaKnown RBP16.83■□□□□ 0.28
SRCAP-204ENST00000474008 TERF2IPQ9NYB0 399 aa16.82■□□□□ 0.28
SRCAP-204ENST00000474008 TONSLQ96HA7 1378 aa16.81■□□□□ 0.28
SRCAP-204ENST00000474008 RRS1Q15050 365 aaKnown RBP16.81■□□□□ 0.28
SRCAP-204ENST00000474008 USHBP1Q8N6Y0 703 aa16.81■□□□□ 0.28
SRCAP-204ENST00000474008 MTFR1LQ9H019 292 aa16.81■□□□□ 0.28
SRCAP-204ENST00000474008 ABCC6O95255 1503 aa16.8■□□□□ 0.28
SRCAP-204ENST00000474008 LTN1O94822 1766 aa16.8■□□□□ 0.28
SRCAP-204ENST00000474008 HOXC9P31274 260 aa16.8■□□□□ 0.28
SRCAP-204ENST00000474008 PRIM1P49642 420 aaKnown RBP16.8■□□□□ 0.28
SRCAP-204ENST00000474008 AMER1Q5JTC6 1135 aaPredicted RBP16.8■□□□□ 0.28
SRCAP-204ENST00000474008 SYTL4Q96C24 671 aaPredicted RBP16.8■□□□□ 0.28
SRCAP-204ENST00000474008 NHSQ6T4R5 1651 aa16.79■□□□□ 0.28
SRCAP-204ENST00000474008 IFNLR1Q8IU57 520 aaPredicted RBP16.79■□□□□ 0.28
SRCAP-204ENST00000474008 GGNBP2Q9H3C7 697 aa16.79■□□□□ 0.28
SRCAP-204ENST00000474008 NBPF6Q5VWK0 638 aa16.78■□□□□ 0.28
SRCAP-204ENST00000474008 REM2Q8IYK8 340 aaPredicted RBP16.78■□□□□ 0.28
SRCAP-204ENST00000474008 NBPF4Q96M43 638 aa16.78■□□□□ 0.28
SRCAP-204ENST00000474008 USP54Q70EL1 1684 aa16.78■□□□□ 0.28
SRCAP-204ENST00000474008 AMPHP49418 695 aa16.77■□□□□ 0.28
SRCAP-204ENST00000474008 ZNF784Q8NCA9 323 aaPredicted RBP16.77■□□□□ 0.28
SRCAP-204ENST00000474008 COG3Q96JB2 828 aa16.77■□□□□ 0.28
SRCAP-204ENST00000474008 ARXQ96QS3 562 aa16.77■□□□□ 0.28
SRCAP-204ENST00000474008 KAT6BQ8WYB5 2073 aa16.77■□□□□ 0.27
SRCAP-204ENST00000474008 PAPPAQ13219 1627 aa16.77■□□□□ 0.27
SRCAP-204ENST00000474008 BTAF1O14981 1849 aa16.76■□□□□ 0.27
SRCAP-204ENST00000474008 FYB1O15117 783 aa16.76■□□□□ 0.27
SRCAP-204ENST00000474008 NSD2O96028 1365 aa16.76■□□□□ 0.27
SRCAP-204ENST00000474008 MEGF6O75095 1541 aa16.75■□□□□ 0.27
SRCAP-204ENST00000474008 PNPLA7Q6ZV29 1317 aa16.75■□□□□ 0.27
SRCAP-204ENST00000474008 KLHL34Q8N239 644 aa16.75■□□□□ 0.27
SRCAP-204ENST00000474008 PUS7Q96PZ0 661 aaKnown RBP16.75■□□□□ 0.27
SRCAP-204ENST00000474008 HSP90AB2PQ58FF8 381 aa16.73■□□□□ 0.27
SRCAP-204ENST00000474008 ZCRB1Q8TBF4 217 aaKnown RBP16.73■□□□□ 0.27
SRCAP-204ENST00000474008 SMIM5Q71RC9 77 aa16.72■□□□□ 0.27
SRCAP-204ENST00000474008 NLGN2Q8NFZ4 835 aa16.72■□□□□ 0.27
SRCAP-204ENST00000474008 RGPD2P0DJD1 1756 aa16.72■□□□□ 0.27
SRCAP-204ENST00000474008 TFCP2L1Q9NZI6 479 aa16.71■□□□□ 0.27
SRCAP-204ENST00000474008 FAM208AQ9UK61 1670 aaKnown RBP16.7■□□□□ 0.26
SRCAP-204ENST00000474008 ANKRD36BQ8N2N9 1353 aa16.7■□□□□ 0.26
SRCAP-204ENST00000474008 CARD14Q9BXL6 1004 aa16.7■□□□□ 0.26
SRCAP-204ENST00000474008 MSL1Q68DK7 614 aa16.69■□□□□ 0.26
SRCAP-204ENST00000474008 COL23A1Q86Y22 540 aaPredicted RBP16.69■□□□□ 0.26
SRCAP-204ENST00000474008 SPDYE1Q8NFV5 336 aaPredicted RBP16.69■□□□□ 0.26
SRCAP-204ENST00000474008 SLC27A3Q5K4L6 730 aa16.68■□□□□ 0.26
SRCAP-204ENST00000474008 AMIGO3Q86WK7 504 aa16.68■□□□□ 0.26
SRCAP-204ENST00000474008 PELP1Q8IZL8 1130 aaKnown RBP16.68■□□□□ 0.26
SRCAP-204ENST00000474008 CCNL1Q9UK58 526 aaPredicted RBP16.68■□□□□ 0.26
SRCAP-204ENST00000474008 CEP350Q5VT06 3117 aa16.68■□□□□ 0.26
SRCAP-204ENST00000474008 GPR162Q16538 588 aa16.67■□□□□ 0.26
SRCAP-204ENST00000474008 EMILIN1Q9Y6C2 1016 aa16.67■□□□□ 0.26
SRCAP-204ENST00000474008 USP47Q96K76 1375 aa16.66■□□□□ 0.26
SRCAP-204ENST00000474008 SHANK3Q9BYB0 1731 aa16.66■□□□□ 0.26
SRCAP-204ENST00000474008 CYP27B1O15528 508 aa16.65■□□□□ 0.26
SRCAP-204ENST00000474008 YBX3P16989 372 aaKnown RBP eCLIP16.64■□□□□ 0.25
SRCAP-204ENST00000474008 TMF1P82094 1093 aa16.64■□□□□ 0.25
SRCAP-204ENST00000474008 DOT1LQ8TEK3 1739 aa16.64■□□□□ 0.25
SRCAP-204ENST00000474008 MAP3K5Q99683 1374 aa16.64■□□□□ 0.25
SRCAP-204ENST00000474008 MPRIPQ6WCQ1 1025 aa16.63■□□□□ 0.25
SRCAP-204ENST00000474008 RAPGEF4Q8WZA2 1011 aa16.63■□□□□ 0.25
SRCAP-204ENST00000474008 TUBGCP6Q96RT7 1819 aa16.62■□□□□ 0.25
SRCAP-204ENST00000474008 PPM1GO15355 546 aaPredicted RBP16.62■□□□□ 0.25
SRCAP-204ENST00000474008 POLD1P28340 1107 aa16.62■□□□□ 0.25
SRCAP-204ENST00000474008 SLC16A10Q8TF71 515 aa16.62■□□□□ 0.25
SRCAP-204ENST00000474008 PITPNM1O00562 1244 aa16.61■□□□□ 0.25
SRCAP-204ENST00000474008 TATP17735 454 aaPredicted RBP16.61■□□□□ 0.25
SRCAP-204ENST00000474008 WWC3Q9ULE0 1092 aa16.61■□□□□ 0.25
SRCAP-204ENST00000474008 RTL1A6NKG5 1358 aa16.61■□□□□ 0.25
SRCAP-204ENST00000474008 INSRP06213 1382 aa16.6■□□□□ 0.25
SRCAP-204ENST00000474008 PIGBQ92521 554 aa16.59■□□□□ 0.25
SRCAP-204ENST00000474008 PALLDQ8WX93 1383 aa16.58■□□□□ 0.24
SRCAP-204ENST00000474008 NSD3Q9BZ95 1437 aa16.58■□□□□ 0.24
SRCAP-204ENST00000474008 LY75O60449 1722 aa16.58■□□□□ 0.24
SRCAP-204ENST00000474008 FLT4P35916 1363 aa16.57■□□□□ 0.24
SRCAP-204ENST00000474008 C1QTNF8P60827 252 aa16.57■□□□□ 0.24
SRCAP-204ENST00000474008 PCDH11XQ9BZA7 1347 aa16.56■□□□□ 0.24
SRCAP-204ENST00000474008 PCDH11YQ9BZA8 1340 aa16.56■□□□□ 0.24
SRCAP-204ENST00000474008 SENP3-EIF4A1A0A087X0R7 540 aa16.56■□□□□ 0.24
SRCAP-204ENST00000474008 PHF14O94880 888 aa16.56■□□□□ 0.24
SRCAP-204ENST00000474008 TNNT2P45379 298 aaPredicted RBP16.56■□□□□ 0.24
SRCAP-204ENST00000474008 EYA1Q99502 592 aa16.56■□□□□ 0.24
SRCAP-204ENST00000474008 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
SRCAP-204ENST00000474008 CGNL1Q0VF96 1302 aa16.55■□□□□ 0.24
SRCAP-204ENST00000474008 MIER1Q8N108 512 aa16.55■□□□□ 0.24
SRCAP-204ENST00000474008 PLCD3Q8N3E9 789 aa16.55■□□□□ 0.24
SRCAP-204ENST00000474008 POLR3GLQ9BT43 218 aa16.55■□□□□ 0.24
SRCAP-204ENST00000474008 SMG6Q86US8 1419 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms