RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 USHBP1Q8N6Y0 703 aa17.9■□□□□ 0.46
TPM3-216ENST00000473036 BCL9O00512 1426 aa17.89■□□□□ 0.46
TPM3-216ENST00000473036 DDX10Q13206 875 aaKnown RBP17.89■□□□□ 0.45
TPM3-216ENST00000473036 CDCA7Q9BWT1 371 aaPredicted RBP17.89■□□□□ 0.45
TPM3-216ENST00000473036 EIF4A2Q14240 407 aaKnown RBP17.88■□□□□ 0.45
TPM3-216ENST00000473036 NCAPD2Q15021 1401 aa17.88■□□□□ 0.45
TPM3-216ENST00000473036 MEGF6O75095 1541 aa17.88■□□□□ 0.45
TPM3-216ENST00000473036 SHANK3Q9BYB0 1731 aa17.86■□□□□ 0.45
TPM3-216ENST00000473036 MARCH10Q8NA82 808 aaPredicted RBP17.86■□□□□ 0.45
TPM3-216ENST00000473036 BCL11BQ9C0K0 894 aaPredicted RBP17.86■□□□□ 0.45
TPM3-216ENST00000473036 MTHFSP49914 203 aa17.85■□□□□ 0.45
TPM3-216ENST00000473036 DDB1Q16531 1140 aa17.85■□□□□ 0.45
TPM3-216ENST00000473036 EYA1Q99502 592 aa17.85■□□□□ 0.45
TPM3-216ENST00000473036 IL2RBP14784 551 aa17.84■□□□□ 0.45
TPM3-216ENST00000473036 COL3A1P02461 1466 aaPredicted RBP17.83■□□□□ 0.45
TPM3-216ENST00000473036 TNS2Q63HR2 1409 aa17.83■□□□□ 0.45
TPM3-216ENST00000473036 SBF2Q86WG5 1849 aa17.83■□□□□ 0.44
TPM3-216ENST00000473036 IL13P35225 146 aa17.82■□□□□ 0.44
TPM3-216ENST00000473036 EXOC5O00471 708 aa17.8■□□□□ 0.44
TPM3-216ENST00000473036 PPP2R1AP30153 589 aa17.8■□□□□ 0.44
TPM3-216ENST00000473036 PTF1AQ7RTS3 328 aa17.8■□□□□ 0.44
TPM3-216ENST00000473036 CASZ1Q86V15 1759 aa17.8■□□□□ 0.44
TPM3-216ENST00000473036 IGSF1Q8N6C5 1336 aa17.79■□□□□ 0.44
TPM3-216ENST00000473036 ZNF316A6NFI3 1004 aaPredicted RBP17.79■□□□□ 0.44
TPM3-216ENST00000473036 AEBP1Q8IUX7 1158 aa17.78■□□□□ 0.44
TPM3-216ENST00000473036 PKD1L3Q7Z443 1732 aa17.78■□□□□ 0.44
TPM3-216ENST00000473036 ANO8Q9HCE9 1232 aaPredicted RBP17.76■□□□□ 0.43
TPM3-216ENST00000473036 ZCRB1Q8TBF4 217 aaKnown RBP17.75■□□□□ 0.43
TPM3-216ENST00000473036 PROM2Q8N271 834 aa17.74■□□□□ 0.43
TPM3-216ENST00000473036 DDX54Q8TDD1 881 aaKnown RBP17.74■□□□□ 0.43
TPM3-216ENST00000473036 STK32BQ9NY57 414 aa17.74■□□□□ 0.43
TPM3-216ENST00000473036 UTRNP46939 3433 aa17.73■□□□□ 0.43
TPM3-216ENST00000473036 TATP17735 454 aaPredicted RBP17.73■□□□□ 0.43
TPM3-216ENST00000473036 PTGER2P43116 358 aa17.73■□□□□ 0.43
TPM3-216ENST00000473036 RAPGEF4Q8WZA2 1011 aa17.73■□□□□ 0.43
TPM3-216ENST00000473036 KDRP35968 1356 aa17.73■□□□□ 0.43
TPM3-216ENST00000473036 CYP27B1O15528 508 aa17.72■□□□□ 0.43
TPM3-216ENST00000473036 SLC15A2Q16348 729 aa17.72■□□□□ 0.43
TPM3-216ENST00000473036 TXNRD1Q16881 649 aa17.72■□□□□ 0.43
TPM3-216ENST00000473036 SULT6B1Q6IMI4 303 aa17.72■□□□□ 0.43
TPM3-216ENST00000473036 MTFR1LQ9H019 292 aa17.72■□□□□ 0.43
TPM3-216ENST00000473036 NHSQ6T4R5 1651 aa17.71■□□□□ 0.43
TPM3-216ENST00000473036 DIAPH1O60610 1272 aaKnown RBP17.71■□□□□ 0.43
TPM3-216ENST00000473036 TOGARAM1Q9Y4F4 1720 aa17.71■□□□□ 0.43
TPM3-216ENST00000473036 KAT6BQ8WYB5 2073 aa17.71■□□□□ 0.43
TPM3-216ENST00000473036 MAP3K5Q99683 1374 aa17.7■□□□□ 0.42
TPM3-216ENST00000473036 ACSBG1Q96GR2 724 aa17.7■□□□□ 0.42
TPM3-216ENST00000473036 DOT1LQ8TEK3 1739 aa17.69■□□□□ 0.42
TPM3-216ENST00000473036 ZBTB7AO95365 584 aa17.69■□□□□ 0.42
TPM3-216ENST00000473036 HMOX1P09601 288 aa17.69■□□□□ 0.42
TPM3-216ENST00000473036 ZNF784Q8NCA9 323 aaPredicted RBP17.68■□□□□ 0.42
TPM3-216ENST00000473036 SYT17Q9BSW7 474 aa17.68■□□□□ 0.42
TPM3-216ENST00000473036 RALBP1Q15311 655 aa17.67■□□□□ 0.42
TPM3-216ENST00000473036 SGIP1Q9BQI5 828 aa17.67■□□□□ 0.42
TPM3-216ENST00000473036 BTAF1O14981 1849 aa17.67■□□□□ 0.42
TPM3-216ENST00000473036 FHDC1Q9C0D6 1143 aaPredicted RBP17.66■□□□□ 0.42
TPM3-216ENST00000473036 PDGFDQ9GZP0 370 aaPredicted RBP17.66■□□□□ 0.42
TPM3-216ENST00000473036 PRKRIP1Q9H875 184 aaPredicted RBP17.66■□□□□ 0.42
TPM3-216ENST00000473036 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.66■□□□□ 0.421e-6■■■■□ 21.5
TPM3-216ENST00000473036 PCDH11XQ9BZA7 1347 aa17.66■□□□□ 0.42
TPM3-216ENST00000473036 PCDH11YQ9BZA8 1340 aa17.66■□□□□ 0.42
TPM3-216ENST00000473036 ITGB4P16144 1822 aa17.65■□□□□ 0.42
TPM3-216ENST00000473036 U2SURPO15042 1029 aaKnown RBP17.64■□□□□ 0.41
TPM3-216ENST00000473036 PHKG2P15735 406 aa17.64■□□□□ 0.41
TPM3-216ENST00000473036 NKX1-1Q15270 411 aaPredicted RBP17.64■□□□□ 0.41
TPM3-216ENST00000473036 ATF5Q9Y2D1 282 aaPredicted RBP17.64■□□□□ 0.41
TPM3-216ENST00000473036 PRIM1P49642 420 aaKnown RBP17.63■□□□□ 0.41
TPM3-216ENST00000473036 SPG7Q9UQ90 795 aa17.63■□□□□ 0.41
TPM3-216ENST00000473036 PLEKHG2Q9H7P9 1386 aa17.63■□□□□ 0.41
TPM3-216ENST00000473036 CFAP53Q96M91 514 aa17.62■□□□□ 0.41
TPM3-216ENST00000473036 ARXQ96QS3 562 aa17.62■□□□□ 0.41
TPM3-216ENST00000473036 RSPH6AQ9H0K4 717 aa17.62■□□□□ 0.41
TPM3-216ENST00000473036 MYBBP1AQ9BQG0 1328 aaKnown RBP17.62■□□□□ 0.41
TPM3-216ENST00000473036 PAPPAQ13219 1627 aa17.61■□□□□ 0.41
TPM3-216ENST00000473036 CHD4Q14839 1912 aa17.61■□□□□ 0.41
TPM3-216ENST00000473036 SLC16A10Q8TF71 515 aa17.61■□□□□ 0.41
TPM3-216ENST00000473036 KDM6AO15550 1401 aaPredicted RBP17.61■□□□□ 0.41
TPM3-216ENST00000473036 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
TPM3-216ENST00000473036 PLEKHO1Q53GL0 409 aaPredicted RBP17.6■□□□□ 0.41
TPM3-216ENST00000473036 IFNL2Q8IZJ0 200 aa17.6■□□□□ 0.41
TPM3-216ENST00000473036 PHACTR3Q96KR7 559 aa17.6■□□□□ 0.41
TPM3-216ENST00000473036 VIRMAQ69YN4 1812 aaKnown RBP17.59■□□□□ 0.41
TPM3-216ENST00000473036 SLC27A3Q5K4L6 730 aa17.59■□□□□ 0.41
TPM3-216ENST00000473036 ZNF530Q6P9A1 599 aaPredicted RBP17.59■□□□□ 0.41
TPM3-216ENST00000473036 C1QTNF8P60827 252 aa17.58■□□□□ 0.4
TPM3-216ENST00000473036 AMOTQ4VCS5 1084 aa17.58■□□□□ 0.4
TPM3-216ENST00000473036 U2AF1L5P0DN76 240 aaPredicted RBP17.57■□□□□ 0.4
TPM3-216ENST00000473036 PRKAR2BP31323 418 aa17.57■□□□□ 0.4
TPM3-216ENST00000473036 U2AF1Q01081 240 aaKnown RBP eCLIP17.57■□□□□ 0.4
TPM3-216ENST00000473036 CCDC184Q52MB2 194 aa17.57■□□□□ 0.4
TPM3-216ENST00000473036 SYTL4Q96C24 671 aaPredicted RBP17.57■□□□□ 0.4
TPM3-216ENST00000473036 SCN11AQ9UI33 1791 aa17.57■□□□□ 0.4
TPM3-216ENST00000473036 LY75O60449 1722 aa17.56■□□□□ 0.4
TPM3-216ENST00000473036 ADAMTS7Q9UKP4 1686 aa17.56■□□□□ 0.4
TPM3-216ENST00000473036 PIGBQ92521 554 aa17.56■□□□□ 0.4
TPM3-216ENST00000473036 MPRIPQ6WCQ1 1025 aa17.55■□□□□ 0.4
TPM3-216ENST00000473036 LGR6Q9HBX8 967 aa17.55■□□□□ 0.4
TPM3-216ENST00000473036 NUDCQ9Y266 331 aa17.55■□□□□ 0.4
TPM3-216ENST00000473036 QSER1Q2KHR3 1735 aa17.55■□□□□ 0.4
TPM3-216ENST00000473036 HMGB2P26583 209 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms