RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 CFAP44Q96MT7 982 aa35.68■■■■□ 3.3
HOXB3-207ENST00000472863 COL5A2P05997 1499 aaPredicted RBP35.68■■■■□ 3.3
HOXB3-207ENST00000472863 PLEKHO1Q53GL0 409 aaPredicted RBP35.67■■■■□ 3.3
HOXB3-207ENST00000472863 WDR17Q8IZU2 1322 aa35.67■■■■□ 3.3
HOXB3-207ENST00000472863 HTATSF1O43719 755 aaKnown RBP35.66■■■■□ 3.3
HOXB3-207ENST00000472863 FAM208AQ9UK61 1670 aaKnown RBP35.66■■■■□ 3.3
HOXB3-207ENST00000472863 STRN4Q9NRL3 753 aa35.65■■■■□ 3.3
HOXB3-207ENST00000472863 MBIPQ9NS73 344 aa35.65■■■■□ 3.3
HOXB3-207ENST00000472863 MAP3K5Q99683 1374 aa35.65■■■■□ 3.3
HOXB3-207ENST00000472863 PLIN1O60240 522 aa35.65■■■■□ 3.3
HOXB3-207ENST00000472863 AMOTQ4VCS5 1084 aa35.65■■■■□ 3.3
HOXB3-207ENST00000472863 TOM1L2Q6ZVM7 507 aa35.64■■■■□ 3.3
HOXB3-207ENST00000472863 RAPGEF4Q8WZA2 1011 aa35.64■■■■□ 3.3
HOXB3-207ENST00000472863 BCAR3O75815 825 aa35.63■■■■□ 3.29
HOXB3-207ENST00000472863 EVA1CP58658 441 aa35.63■■■■□ 3.29
HOXB3-207ENST00000472863 CRB1P82279 1406 aa35.63■■■■□ 3.29
HOXB3-207ENST00000472863 IL17REQ8NFR9 667 aa35.63■■■■□ 3.29
HOXB3-207ENST00000472863 ZNF530Q6P9A1 599 aaPredicted RBP35.62■■■■□ 3.29
HOXB3-207ENST00000472863 BTG4Q9NY30 223 aa35.62■■■■□ 3.29
HOXB3-207ENST00000472863 LARP1Q6PKG0 1096 aaKnown RBP35.61■■■■□ 3.29
HOXB3-207ENST00000472863 ADAMTS2O95450 1211 aa35.59■■■■□ 3.29
HOXB3-207ENST00000472863 CHL1O00533 1208 aa35.59■■■■□ 3.29
HOXB3-207ENST00000472863 TATP17735 454 aaPredicted RBP35.59■■■■□ 3.29
HOXB3-207ENST00000472863 RARSP54136 660 aaKnown RBP35.59■■■■□ 3.29
HOXB3-207ENST00000472863 MEGF6O75095 1541 aa35.58■■■■□ 3.29
HOXB3-207ENST00000472863 NUTM2BA6NNL0 878 aaPredicted RBP35.58■■■■□ 3.29
HOXB3-207ENST00000472863 NUTM2EB1AL46 878 aaPredicted RBP35.58■■■■□ 3.29
HOXB3-207ENST00000472863 NUTM2AQ8IVF1 878 aaPredicted RBP35.58■■■■□ 3.29
HOXB3-207ENST00000472863 AKAP4Q5JQC9 854 aa35.57■■■■□ 3.29
HOXB3-207ENST00000472863 MIS18AQ9NYP9 233 aa35.56■■■■□ 3.28
HOXB3-207ENST00000472863 LGR6Q9HBX8 967 aa35.55■■■■□ 3.28
HOXB3-207ENST00000472863 COL14A1Q05707 1796 aaKnown RBP35.55■■■■□ 3.28
HOXB3-207ENST00000472863 CT47B1P0C2W7 299 aaPredicted RBP35.55■■■■□ 3.28
HOXB3-207ENST00000472863 CARD10Q9BWT7 1032 aa35.55■■■■□ 3.28
HOXB3-207ENST00000472863 C1orf141Q5JVX7 400 aa35.53■■■■□ 3.28
HOXB3-207ENST00000472863 TSPYL6Q8N831 410 aa35.53■■■■□ 3.28
HOXB3-207ENST00000472863 MPRIPQ6WCQ1 1025 aa35.52■■■■□ 3.28
HOXB3-207ENST00000472863 BCL2L13Q9BXK5 485 aa35.52■■■■□ 3.28
HOXB3-207ENST00000472863 ELL2O00472 640 aaPredicted RBP35.5■■■■□ 3.27
HOXB3-207ENST00000472863 C8orf58Q8NAV2 365 aa35.5■■■■□ 3.27
HOXB3-207ENST00000472863 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.5■■■■□ 3.27
HOXB3-207ENST00000472863 SPG7Q9UQ90 795 aa35.5■■■■□ 3.27
HOXB3-207ENST00000472863 LRRC37A3O60309 1634 aa35.49■■■■□ 3.27
HOXB3-207ENST00000472863 CEMIPQ8WUJ3 1361 aa35.49■■■■□ 3.27
HOXB3-207ENST00000472863 USP35Q9P2H5 1018 aa35.49■■■■□ 3.27
HOXB3-207ENST00000472863 C20orf194Q5TEA3 1177 aa35.48■■■■□ 3.27
HOXB3-207ENST00000472863 TSPYL4Q9UJ04 414 aa35.48■■■■□ 3.27
HOXB3-207ENST00000472863 ERICH6BQ5W0A0 696 aa35.47■■■■□ 3.27
HOXB3-207ENST00000472863 VAMP4O75379 141 aa35.47■■■■□ 3.27
HOXB3-207ENST00000472863 GOLGA6L2Q8N9W4 650 aaPredicted RBP35.47■■■■□ 3.27
HOXB3-207ENST00000472863 JCADQ9P266 1359 aa35.47■■■■□ 3.27
HOXB3-207ENST00000472863 TAF7Q15545 349 aaPredicted RBP35.46■■■■□ 3.27
HOXB3-207ENST00000472863 KRT24Q2M2I5 525 aa35.45■■■■□ 3.27
HOXB3-207ENST00000472863 RNMTO43148 476 aaKnown RBP35.45■■■■□ 3.27
HOXB3-207ENST00000472863 SSH1Q8WYL5 1049 aa35.45■■■■□ 3.27
HOXB3-207ENST00000472863 TWISTNBQ3B726 338 aaPredicted RBP35.44■■■■□ 3.26
HOXB3-207ENST00000472863 OVOS2A0A0G2JMS6 1433 aa35.44■■■■□ 3.26
HOXB3-207ENST00000472863 IL2RBP14784 551 aa35.43■■■■□ 3.26
HOXB3-207ENST00000472863 PHKG2P15735 406 aa35.43■■■■□ 3.26
HOXB3-207ENST00000472863 PLEKHG2Q9H7P9 1386 aa35.43■■■■□ 3.26
HOXB3-207ENST00000472863 CYP27B1O15528 508 aa35.42■■■■□ 3.26
HOXB3-207ENST00000472863 FRAT1Q92837 279 aaPredicted RBP35.42■■■■□ 3.26
HOXB3-207ENST00000472863 IFNL2Q8IZJ0 200 aa35.41■■■■□ 3.26
HOXB3-207ENST00000472863 SMC4Q9NTJ3 1288 aa35.41■■■■□ 3.26
HOXB3-207ENST00000472863 HSPA1LP34931 641 aa35.4■■■■□ 3.26
HOXB3-207ENST00000472863 EXOC6Q8TAG9 804 aa35.4■■■■□ 3.26
HOXB3-207ENST00000472863 PKD1L3Q7Z443 1732 aa35.4■■■■□ 3.26
HOXB3-207ENST00000472863 PLCH1Q4KWH8 1693 aa35.39■■■■□ 3.26
HOXB3-207ENST00000472863 TEFQ10587 303 aa35.39■■■■□ 3.26
HOXB3-207ENST00000472863 VIRMAQ69YN4 1812 aaKnown RBP35.38■■■■□ 3.26
HOXB3-207ENST00000472863 ZCRB1Q8TBF4 217 aaKnown RBP35.38■■■■□ 3.25
HOXB3-207ENST00000472863 PARP4Q9UKK3 1724 aaKnown RBP35.38■■■■□ 3.25
HOXB3-207ENST00000472863 CANXP27824 592 aaKnown RBP35.37■■■■□ 3.25
HOXB3-207ENST00000472863 ZNF428Q96B54 188 aa35.37■■■■□ 3.25
HOXB3-207ENST00000472863 BABAM1Q9NWV8 329 aa35.37■■■■□ 3.25
HOXB3-207ENST00000472863 CRBNQ96SW2 442 aa35.36■■■■□ 3.25
HOXB3-207ENST00000472863 ALDH1L2Q3SY69 923 aa35.36■■■■□ 3.25
HOXB3-207ENST00000472863 PPP4R2Q9NY27 417 aa35.35■■■■□ 3.25
HOXB3-207ENST00000472863 KDM6AO15550 1401 aaPredicted RBP35.34■■■■□ 3.25
HOXB3-207ENST00000472863 TCERG1O14776 1098 aaKnown RBP35.34■■■■□ 3.25
HOXB3-207ENST00000472863 ADAMTS7Q9UKP4 1686 aa35.32■■■■□ 3.25
HOXB3-207ENST00000472863 TNNQ9UQP3 1299 aa35.32■■■■□ 3.24
HOXB3-207ENST00000472863 BTBD11A6QL63 1104 aa35.31■■■■□ 3.24
HOXB3-207ENST00000472863 PCDH11XQ9BZA7 1347 aa35.3■■■■□ 3.24
HOXB3-207ENST00000472863 PCDH11YQ9BZA8 1340 aa35.3■■■■□ 3.24
HOXB3-207ENST00000472863 SLIT2O94813 1529 aa35.3■■■■□ 3.24
HOXB3-207ENST00000472863 NRAPQ86VF7 1730 aa35.3■■■■□ 3.24
HOXB3-207ENST00000472863 SPATA31A6Q5VVP1 1343 aa35.3■■■■□ 3.24
HOXB3-207ENST00000472863 DCAF5Q96JK2 942 aa35.3■■■■□ 3.24
HOXB3-207ENST00000472863 C8orf37Q96NL8 207 aa35.3■■■■□ 3.24
HOXB3-207ENST00000472863 NOB1Q9ULX3 412 aaKnown RBP35.3■■■■□ 3.24
HOXB3-207ENST00000472863 KCNQ3O43525 872 aa35.29■■■■□ 3.24
HOXB3-207ENST00000472863 SCN11AQ9UI33 1791 aa35.29■■■■□ 3.24
HOXB3-207ENST00000472863 PDE3AQ14432 1141 aa35.28■■■■□ 3.24
HOXB3-207ENST00000472863 MRPL50Q8N5N7 158 aaKnown RBP35.28■■■■□ 3.24
HOXB3-207ENST00000472863 DDX54Q8TDD1 881 aaKnown RBP35.28■■■■□ 3.24
HOXB3-207ENST00000472863 PANK1Q8TE04 598 aa35.28■■■■□ 3.24
HOXB3-207ENST00000472863 NGLY1Q96IV0 654 aa35.28■■■■□ 3.24
HOXB3-207ENST00000472863 HSP90AB1P08238 724 aaKnown RBP35.27■■■■□ 3.24
HOXB3-207ENST00000472863 ZKSCAN2Q63HK3 967 aa35.27■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms