RNA–Protein interactions for RNA: ENST00000472218.1

RPS18-231, Transcript of ribosomal protein S18, human

TSL 2

Gene RPS18, Length 1,109 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS18-231	ENST00000472218	SUPT16H	Q9Y5B9	1047 aa	Known RBP	14.03	□□□□□ -0.16
RPS18-231	ENST00000472218	JCAD	Q9P266	1359 aa		14.03	□□□□□ -0.16
RPS18-231	ENST00000472218	ABCA3	Q99758	1704 aa		14.02	□□□□□ -0.16
RPS18-231	ENST00000472218	COL5A2	P05997	1499 aa	Predicted RBP	14.02	□□□□□ -0.16
RPS18-231	ENST00000472218	OVOS2	A0A0G2JMS6	1433 aa		14.02	□□□□□ -0.16
RPS18-231	ENST00000472218	MAP3K5	Q99683	1374 aa		14.02	□□□□□ -0.17
RPS18-231	ENST00000472218	FAM83G	A6ND36	823 aa		14.02	□□□□□ -0.17
RPS18-231	ENST00000472218	POTED	Q86YR6	584 aa		14.02	□□□□□ -0.17
RPS18-231	ENST00000472218	PLEKHG5	O94827	1062 aa		14.01	□□□□□ -0.17
RPS18-231	ENST00000472218	TAT	P17735	454 aa	Predicted RBP	14.01	□□□□□ -0.17
RPS18-231	ENST00000472218	AKAP4	Q5JQC9	854 aa		14.01	□□□□□ -0.17
RPS18-231	ENST00000472218	SPATA31A6	Q5VVP1	1343 aa		14	□□□□□ -0.17
RPS18-231	ENST00000472218	FANCI	Q9NVI1	1328 aa		14	□□□□□ -0.17
RPS18-231	ENST00000472218	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	14	□□□□□ -0.17
RPS18-231	ENST00000472218	SPG7	Q9UQ90	795 aa		14	□□□□□ -0.17
RPS18-231	ENST00000472218	GTF3C3	Q9Y5Q9	886 aa		14	□□□□□ -0.17
RPS18-231	ENST00000472218	COL14A1	Q05707	1796 aa	Known RBP	13.99	□□□□□ -0.17
RPS18-231	ENST00000472218	SOS1	Q07889	1333 aa	Predicted RBP	13.99	□□□□□ -0.17
RPS18-231	ENST00000472218	CHL1	O00533	1208 aa		13.99	□□□□□ -0.17
RPS18-231	ENST00000472218	EVA1C	P58658	441 aa		13.99	□□□□□ -0.17
RPS18-231	ENST00000472218	C1orf141	Q5JVX7	400 aa		13.99	□□□□□ -0.17
RPS18-231	ENST00000472218	TOM1L2	Q6ZVM7	507 aa		13.99	□□□□□ -0.17
RPS18-231	ENST00000472218	USHBP1	Q8N6Y0	703 aa		13.99	□□□□□ -0.17
RPS18-231	ENST00000472218	CEMIP	Q8WUJ3	1361 aa		13.98	□□□□□ -0.17
RPS18-231	ENST00000472218	HSP90AB1	P08238	724 aa	Known RBP	13.98	□□□□□ -0.17
RPS18-231	ENST00000472218	CRB1	P82279	1406 aa		13.98	□□□□□ -0.17
RPS18-231	ENST00000472218	RRP1	P56182	461 aa	Known RBP	13.97	□□□□□ -0.17
RPS18-231	ENST00000472218	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.97	□□□□□ -0.17
RPS18-231	ENST00000472218	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.97	□□□□□ -0.17
RPS18-231	ENST00000472218	CHMP4A	Q9BY43	222 aa		13.97	□□□□□ -0.17
RPS18-231	ENST00000472218	BTG4	Q9NY30	223 aa		13.96	□□□□□ -0.17
RPS18-231	ENST00000472218	THRAP3	Q9Y2W1	955 aa	Known RBP	13.96	□□□□□ -0.17
RPS18-231	ENST00000472218	IL2RB	P14784	551 aa		13.95	□□□□□ -0.18
RPS18-231	ENST00000472218	BRPF1	P55201	1214 aa	Predicted RBP	13.95	□□□□□ -0.18
RPS18-231	ENST00000472218	ALDH1L2	Q3SY69	923 aa		13.95	□□□□□ -0.18
RPS18-231	ENST00000472218	IFNL2	Q8IZJ0	200 aa		13.95	□□□□□ -0.18
RPS18-231	ENST00000472218	MBIP	Q9NS73	344 aa		13.95	□□□□□ -0.18
RPS18-231	ENST00000472218	TAF7	Q15545	349 aa	Predicted RBP	13.94	□□□□□ -0.18
RPS18-231	ENST00000472218	LARP1	Q6PKG0	1096 aa	Known RBP	13.94	□□□□□ -0.18
RPS18-231	ENST00000472218	MCM10	Q7L590	875 aa		13.94	□□□□□ -0.18
RPS18-231	ENST00000472218	ILDR1	Q86SU0	546 aa	Predicted RBP	13.94	□□□□□ -0.18
RPS18-231	ENST00000472218	IL17RE	Q8NFR9	667 aa		13.94	□□□□□ -0.18
RPS18-231	ENST00000472218	RARS	P54136	660 aa	Known RBP	13.93	□□□□□ -0.18
RPS18-231	ENST00000472218	EXOSC9	Q06265	439 aa	Known RBP	13.93	□□□□□ -0.18
RPS18-231	ENST00000472218	TSR2	Q969E8	191 aa	Known RBP	13.93	□□□□□ -0.18
RPS18-231	ENST00000472218	THUMPD2	Q9BTF0	503 aa	Known RBP	13.93	□□□□□ -0.18
RPS18-231	ENST00000472218	MEGF6	O75095	1541 aa		13.93	□□□□□ -0.18
RPS18-231	ENST00000472218	PCDH11X	Q9BZA7	1347 aa		13.92	□□□□□ -0.18
RPS18-231	ENST00000472218	PCDH11Y	Q9BZA8	1340 aa		13.92	□□□□□ -0.18
RPS18-231	ENST00000472218	RGPD5	Q99666	1765 aa		13.92	□□□□□ -0.18
RPS18-231	ENST00000472218	SLIT2	O94813	1529 aa		13.92	□□□□□ -0.18
RPS18-231	ENST00000472218	RNMT	O43148	476 aa	Known RBP	13.92	□□□□□ -0.18
RPS18-231	ENST00000472218	MS4A1	P11836	297 aa		13.92	□□□□□ -0.18
RPS18-231	ENST00000472218	PHKG2	P15735	406 aa		13.92	□□□□□ -0.18
RPS18-231	ENST00000472218	DCTN1	Q14203	1278 aa		13.92	□□□□□ -0.18
RPS18-231	ENST00000472218	ZCRB1	Q8TBF4	217 aa	Known RBP	13.92	□□□□□ -0.18
RPS18-231	ENST00000472218	DCAF5	Q96JK2	942 aa		13.92	□□□□□ -0.18
RPS18-231	ENST00000472218	STRN4	Q9NRL3	753 aa		13.92	□□□□□ -0.18
RPS18-231	ENST00000472218	LRRC37A3	O60309	1634 aa		13.92	□□□□□ -0.18
RPS18-231	ENST00000472218	FKBP8	Q14318	412 aa		13.91	□□□□□ -0.18
RPS18-231	ENST00000472218	PDE3A	Q14432	1141 aa		13.91	□□□□□ -0.18
RPS18-231	ENST00000472218	NKX1-1	Q15270	411 aa	Predicted RBP	13.91	□□□□□ -0.18
RPS18-231	ENST00000472218	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.91	□□□□□ -0.18
RPS18-231	ENST00000472218	TSPYL4	Q9UJ04	414 aa		13.91	□□□□□ -0.18
RPS18-231	ENST00000472218	LAS1L	Q9Y4W2	734 aa	Known RBP	13.91	□□□□□ -0.18
RPS18-231	ENST00000472218	DLG5	Q8TDM6	1919 aa		13.91	□□□□□ -0.18
RPS18-231	ENST00000472218	VAMP4	O75379	141 aa		13.9	□□□□□ -0.18
RPS18-231	ENST00000472218	HOXB7	P09629	217 aa		13.9	□□□□□ -0.18
RPS18-231	ENST00000472218	TEF	Q10587	303 aa		13.9	□□□□□ -0.18
RPS18-231	ENST00000472218	LRP6	O75581	1613 aa		13.9	□□□□□ -0.19
RPS18-231	ENST00000472218	DISP2	A7MBM2	1401 aa		13.9	□□□□□ -0.19
RPS18-231	ENST00000472218	RGPD2	P0DJD1	1756 aa		13.89	□□□□□ -0.19
RPS18-231	ENST00000472218	IPO8	O15397	1037 aa	Known RBP	13.89	□□□□□ -0.19
RPS18-231	ENST00000472218	ADAMTS2	O95450	1211 aa		13.89	□□□□□ -0.19
RPS18-231	ENST00000472218	AAMP	Q13685	434 aa		13.89	□□□□□ -0.19
RPS18-231	ENST00000472218	TWISTNB	Q3B726	338 aa	Predicted RBP	13.89	□□□□□ -0.19
RPS18-231	ENST00000472218	BARGIN	Q6ZT62	677 aa		13.89	□□□□□ -0.19
RPS18-231	ENST00000472218	UNC5CL	Q8IV45	518 aa		13.89	□□□□□ -0.19
RPS18-231	ENST00000472218	PKD1L3	Q7Z443	1732 aa		13.89	□□□□□ -0.19
RPS18-231	ENST00000472218	NWD2	Q9ULI1	1742 aa		13.89	□□□□□ -0.19
RPS18-231	ENST00000472218	KIF16B	Q96L93	1317 aa		13.89	□□□□□ -0.19
RPS18-231	ENST00000472218	ADAMTS7	Q9UKP4	1686 aa		13.88	□□□□□ -0.19
RPS18-231	ENST00000472218	PARP4	Q9UKK3	1724 aa	Known RBP	13.88	□□□□□ -0.19
RPS18-231	ENST00000472218	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.88	□□□□□ -0.19
RPS18-231	ENST00000472218	NUTM2E	B1AL46	878 aa	Predicted RBP	13.88	□□□□□ -0.19
RPS18-231	ENST00000472218	ERVV-2	B6SEH9	535 aa		13.88	□□□□□ -0.19
RPS18-231	ENST00000472218	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.88	□□□□□ -0.19
RPS18-231	ENST00000472218	ARHGAP45	Q92619	1136 aa		13.88	□□□□□ -0.19
RPS18-231	ENST00000472218	SPATA31A1	Q5TZJ5	1347 aa		13.88	□□□□□ -0.19
RPS18-231	ENST00000472218	SPATA31A5	Q5VU36	1347 aa		13.88	□□□□□ -0.19
RPS18-231	ENST00000472218	SPATA31A7	Q8IWB4	1347 aa		13.88	□□□□□ -0.19
RPS18-231	ENST00000472218	CYP27B1	O15528	508 aa		13.87	□□□□□ -0.19
RPS18-231	ENST00000472218	VPS72	Q15906	364 aa		13.87	□□□□□ -0.19
RPS18-231	ENST00000472218	LGR6	Q9HBX8	967 aa		13.87	□□□□□ -0.19
RPS18-231	ENST00000472218	MRC1	P22897	1456 aa		13.87	□□□□□ -0.19
RPS18-231	ENST00000472218	MPRIP	Q6WCQ1	1025 aa		13.86	□□□□□ -0.19
RPS18-231	ENST00000472218	SLC52A2	Q9HAB3	445 aa		13.86	□□□□□ -0.19
RPS18-231	ENST00000472218	SMC4	Q9NTJ3	1288 aa		13.86	□□□□□ -0.19
RPS18-231	ENST00000472218	BTBD11	A6QL63	1104 aa		13.85	□□□□□ -0.19
RPS18-231	ENST00000472218	BCAR3	O75815	825 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms