RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 INSRP06213 1382 aa20.72■□□□□ 0.91
CALD1-215ENST00000472096 EMILIN1Q9Y6C2 1016 aa20.7■□□□□ 0.9
CALD1-215ENST00000472096 RREB1Q92766 1687 aa20.7■□□□□ 0.9
CALD1-215ENST00000472096 RGPD3A6NKT7 1758 aaPredicted RBP20.69■□□□□ 0.9
CALD1-215ENST00000472096 RGPD4Q7Z3J3 1758 aa20.69■□□□□ 0.9
CALD1-215ENST00000472096 IL2RBP14784 551 aa20.69■□□□□ 0.9
CALD1-215ENST00000472096 BAG6P46379 1132 aa20.69■□□□□ 0.9
CALD1-215ENST00000472096 BCL9O00512 1426 aa20.69■□□□□ 0.9
CALD1-215ENST00000472096 NHSQ6T4R5 1651 aa20.68■□□□□ 0.9
CALD1-215ENST00000472096 TRIM37O94972 964 aa20.68■□□□□ 0.9
CALD1-215ENST00000472096 HSP90AB2PQ58FF8 381 aa20.68■□□□□ 0.9
CALD1-215ENST00000472096 WASHC2AQ641Q2 1341 aa20.68■□□□□ 0.9
CALD1-215ENST00000472096 MARCH10Q8NA82 808 aaPredicted RBP20.67■□□□□ 0.9
CALD1-215ENST00000472096 MEGF6O75095 1541 aa20.67■□□□□ 0.9
CALD1-215ENST00000472096 EXOC5O00471 708 aa20.66■□□□□ 0.9
CALD1-215ENST00000472096 KNSTRNQ9Y448 316 aa20.66■□□□□ 0.9
CALD1-215ENST00000472096 NUP188Q5SRE5 1749 aa20.66■□□□□ 0.9
CALD1-215ENST00000472096 KAT6BQ8WYB5 2073 aa20.64■□□□□ 0.89
CALD1-215ENST00000472096 PKD1L3Q7Z443 1732 aa20.64■□□□□ 0.89
CALD1-215ENST00000472096 NCAPD2Q15021 1401 aa20.63■□□□□ 0.89
CALD1-215ENST00000472096 PPM1GO15355 546 aaPredicted RBP20.63■□□□□ 0.89
CALD1-215ENST00000472096 TNNT2P45379 298 aaPredicted RBP20.63■□□□□ 0.89
CALD1-215ENST00000472096 AMER1Q5JTC6 1135 aaPredicted RBP20.63■□□□□ 0.89
CALD1-215ENST00000472096 NBPF6Q5VWK0 638 aa20.63■□□□□ 0.89
CALD1-215ENST00000472096 NBPF4Q96M43 638 aa20.63■□□□□ 0.89
CALD1-215ENST00000472096 POLKQ9UBT6 870 aa20.63■□□□□ 0.89
CALD1-215ENST00000472096 DOT1LQ8TEK3 1739 aa20.63■□□□□ 0.89
CALD1-215ENST00000472096 EN1Q05925 392 aaPredicted RBP20.62■□□□□ 0.89
CALD1-215ENST00000472096 USHBP1Q8N6Y0 703 aa20.61■□□□□ 0.89
CALD1-215ENST00000472096 BTAF1O14981 1849 aa20.61■□□□□ 0.89
CALD1-215ENST00000472096 PARD3Q8TEW0 1356 aa20.6■□□□□ 0.89
CALD1-215ENST00000472096 MORC1Q86VD1 984 aa20.6■□□□□ 0.89
CALD1-215ENST00000472096 PER1O15534 1290 aaPredicted RBP20.59■□□□□ 0.89
CALD1-215ENST00000472096 APBA3O96018 575 aa20.59■□□□□ 0.89
CALD1-215ENST00000472096 EZH2Q15910 746 aaKnown RBP20.57■□□□□ 0.88
CALD1-215ENST00000472096 CAMKK2Q96RR4 588 aa20.57■□□□□ 0.88
CALD1-215ENST00000472096 PTF1AQ7RTS3 328 aa20.56■□□□□ 0.88
CALD1-215ENST00000472096 BCL11BQ9C0K0 894 aaPredicted RBP20.56■□□□□ 0.88
CALD1-215ENST00000472096 NPC1L1Q9UHC9 1359 aa20.56■□□□□ 0.88
CALD1-215ENST00000472096 RAPGEF4Q8WZA2 1011 aa20.55■□□□□ 0.88
CALD1-215ENST00000472096 EIF4A2Q14240 407 aaKnown RBP20.54■□□□□ 0.88
CALD1-215ENST00000472096 TATP17735 454 aaPredicted RBP20.53■□□□□ 0.88
CALD1-215ENST00000472096 ZCRB1Q8TBF4 217 aaKnown RBP20.53■□□□□ 0.88
CALD1-215ENST00000472096 EYA1Q99502 592 aa20.53■□□□□ 0.88
CALD1-215ENST00000472096 TOGARAM1Q9Y4F4 1720 aa20.53■□□□□ 0.88
CALD1-215ENST00000472096 CC2D1BQ5T0F9 858 aaKnown RBP20.52■□□□□ 0.88
CALD1-215ENST00000472096 DDX54Q8TDD1 881 aaKnown RBP20.52■□□□□ 0.88
CALD1-215ENST00000472096 ACSBG1Q96GR2 724 aa20.51■□□□□ 0.87
CALD1-215ENST00000472096 ITGB4P16144 1822 aa20.5■□□□□ 0.87
CALD1-215ENST00000472096 PLSCR1O15162 318 aa20.5■□□□□ 0.87
CALD1-215ENST00000472096 KCNQ2O43526 872 aa20.5■□□□□ 0.87
CALD1-215ENST00000472096 IGSF1Q8N6C5 1336 aa20.5■□□□□ 0.87
CALD1-215ENST00000472096 PCDH11XQ9BZA7 1347 aa20.5■□□□□ 0.87
CALD1-215ENST00000472096 PCDH11YQ9BZA8 1340 aa20.5■□□□□ 0.87
CALD1-215ENST00000472096 LY75O60449 1722 aa20.48■□□□□ 0.87
CALD1-215ENST00000472096 PLEKHG2Q9H7P9 1386 aa20.47■□□□□ 0.87
CALD1-215ENST00000472096 LRP5O75197 1615 aa20.45■□□□□ 0.87
CALD1-215ENST00000472096 PAPPAQ13219 1627 aa20.45■□□□□ 0.87
CALD1-215ENST00000472096 PSDA5PKW4 1024 aaPredicted RBP20.45■□□□□ 0.86
CALD1-215ENST00000472096 COL3A1P02461 1466 aaPredicted RBP20.44■□□□□ 0.86
CALD1-215ENST00000472096 MTHFSP49914 203 aa20.44■□□□□ 0.86
CALD1-215ENST00000472096 CYP27B1O15528 508 aa20.43■□□□□ 0.86
CALD1-215ENST00000472096 CNGB1Q14028 1251 aaPredicted RBP20.43■□□□□ 0.86
CALD1-215ENST00000472096 VIRMAQ69YN4 1812 aaKnown RBP20.41■□□□□ 0.86
CALD1-215ENST00000472096 IL13P35225 146 aa20.41■□□□□ 0.86
CALD1-215ENST00000472096 R3HDM1Q15032 1099 aaKnown RBP20.41■□□□□ 0.86
CALD1-215ENST00000472096 TXNRD1Q16881 649 aa20.41■□□□□ 0.86
CALD1-215ENST00000472096 PROM2Q8N271 834 aa20.41■□□□□ 0.86
CALD1-215ENST00000472096 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.41■□□□□ 0.862e-7■■□□□ 13.9
CALD1-215ENST00000472096 SPG7Q9UQ90 795 aa20.41■□□□□ 0.86
CALD1-215ENST00000472096 KDRP35968 1356 aa20.41■□□□□ 0.86
CALD1-215ENST00000472096 PRIM1P49642 420 aaKnown RBP20.4■□□□□ 0.86
CALD1-215ENST00000472096 CASZ1Q86V15 1759 aa20.4■□□□□ 0.86
CALD1-215ENST00000472096 SYTL4Q96C24 671 aaPredicted RBP20.4■□□□□ 0.86
CALD1-215ENST00000472096 NBPF14Q5TI25 921 aa20.39■□□□□ 0.85
CALD1-215ENST00000472096 AEBP1Q8IUX7 1158 aa20.39■□□□□ 0.85
CALD1-215ENST00000472096 ANO8Q9HCE9 1232 aaPredicted RBP20.38■□□□□ 0.85
CALD1-215ENST00000472096 TUBGCP6Q96RT7 1819 aa20.37■□□□□ 0.85
CALD1-215ENST00000472096 QSER1Q2KHR3 1735 aa20.37■□□□□ 0.85
CALD1-215ENST00000472096 TAF1LQ8IZX4 1826 aa20.37■□□□□ 0.85
CALD1-215ENST00000472096 SPDYE2BA6NHP3 402 aa20.36■□□□□ 0.85
CALD1-215ENST00000472096 SPDYE6P0CI01 402 aa20.36■□□□□ 0.85
CALD1-215ENST00000472096 NKX1-1Q15270 411 aaPredicted RBP20.36■□□□□ 0.85
CALD1-215ENST00000472096 SPDYE2Q495Y8 402 aa20.36■□□□□ 0.85
CALD1-215ENST00000472096 SULT6B1Q6IMI4 303 aa20.36■□□□□ 0.85
CALD1-215ENST00000472096 SCN11AQ9UI33 1791 aa20.36■□□□□ 0.85
CALD1-215ENST00000472096 C5P01031 1676 aa20.35■□□□□ 0.85
CALD1-215ENST00000472096 DIAPH1O60610 1272 aaKnown RBP20.35■□□□□ 0.85
CALD1-215ENST00000472096 PHKG2P15735 406 aa20.35■□□□□ 0.85
CALD1-215ENST00000472096 IFNL2Q8IZJ0 200 aa20.35■□□□□ 0.85
CALD1-215ENST00000472096 ZEB1P37275 1124 aaPredicted RBP20.34■□□□□ 0.85
CALD1-215ENST00000472096 SRCAPQ6ZRS2 3230 aa20.32■□□□□ 0.84
CALD1-215ENST00000472096 AMOTQ4VCS5 1084 aa20.32■□□□□ 0.84
CALD1-215ENST00000472096 PLEKHO1Q53GL0 409 aaPredicted RBP20.32■□□□□ 0.84
CALD1-215ENST00000472096 KDM6AO15550 1401 aaPredicted RBP20.31■□□□□ 0.84
CALD1-215ENST00000472096 PPP2R1AP30153 589 aa20.31■□□□□ 0.84
CALD1-215ENST00000472096 ZNF530Q6P9A1 599 aaPredicted RBP20.31■□□□□ 0.84
CALD1-215ENST00000472096 LRRC4BQ9NT99 713 aa20.31■□□□□ 0.84
CALD1-215ENST00000472096 SLC27A3Q5K4L6 730 aa20.3■□□□□ 0.84
CALD1-215ENST00000472096 MPRIPQ6WCQ1 1025 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms