RNA–Protein interactions for RNA: ENST00000472032.1

BBX-222, Transcript of BBX, HMG-box containing, human

TSL 4

Gene BBX, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-222	ENST00000472032	ABCA6	Q8N139	1617 aa		5.08	□□□□□ -1.6
BBX-222	ENST00000472032	TRPM2	O94759	1503 aa		5.08	□□□□□ -1.6
BBX-222	ENST00000472032	MAGI1	Q96QZ7	1491 aa	Predicted RBP	5.08	□□□□□ -1.6
BBX-222	ENST00000472032	IFT140	Q96RY7	1462 aa		5.08	□□□□□ -1.6
BBX-222	ENST00000472032	SCAF11	Q99590	1463 aa	Known RBP	5.08	□□□□□ -1.6
BBX-222	ENST00000472032	KANK1	Q14678	1352 aa		5.08	□□□□□ -1.6
BBX-222	ENST00000472032	BCAR3	O75815	825 aa		5.08	□□□□□ -1.6
BBX-222	ENST00000472032	OAT	P04181	439 aa		5.08	□□□□□ -1.6
BBX-222	ENST00000472032	RIPK4	P57078	832 aa		5.08	□□□□□ -1.6
BBX-222	ENST00000472032	WASHC4	Q2M389	1173 aa		5.08	□□□□□ -1.6
BBX-222	ENST00000472032	SKOR2	Q2VWA4	1001 aa	Predicted RBP	5.08	□□□□□ -1.6
BBX-222	ENST00000472032	NBPF1	Q3BBV0	1214 aa		5.08	□□□□□ -1.6
BBX-222	ENST00000472032	KIAA1211	Q6ZU35	1233 aa		5.08	□□□□□ -1.6
BBX-222	ENST00000472032	SNX21	Q969T3	373 aa		5.08	□□□□□ -1.6
BBX-222	ENST00000472032	TRIM44	Q96DX7	344 aa	Predicted RBP	5.08	□□□□□ -1.6
BBX-222	ENST00000472032	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	5.08	□□□□□ -1.6	1e-6	■■□□□ 13.6
BBX-222	ENST00000472032	PDZRN3	Q9UPQ7	1066 aa		5.08	□□□□□ -1.6
BBX-222	ENST00000472032	KIF1B	O60333	1816 aa		5.08	□□□□□ -1.6
BBX-222	ENST00000472032	ANKRD26	Q9UPS8	1709 aa		5.08	□□□□□ -1.6
BBX-222	ENST00000472032	ADGRL1	O94910	1474 aa		5.07	□□□□□ -1.6
BBX-222	ENST00000472032	PLB1	Q6P1J6	1458 aa		5.07	□□□□□ -1.6
BBX-222	ENST00000472032		G3V3G9	751 aa		5.07	□□□□□ -1.6
BBX-222	ENST00000472032	HS1BP3	Q53T59	392 aa		5.07	□□□□□ -1.6
BBX-222	ENST00000472032	ZSCAN30	Q86W11	494 aa		5.07	□□□□□ -1.6
BBX-222	ENST00000472032	GAS2L3	Q86XJ1	694 aa		5.07	□□□□□ -1.6
BBX-222	ENST00000472032	HSCB	Q8IWL3	235 aa		5.07	□□□□□ -1.6
BBX-222	ENST00000472032	SMC5	Q8IY18	1101 aa		5.07	□□□□□ -1.6
BBX-222	ENST00000472032	SMAP1	Q8IYB5	467 aa	Predicted RBP	5.07	□□□□□ -1.6
BBX-222	ENST00000472032	PROCA1	Q8NCQ7	364 aa	Predicted RBP	5.07	□□□□□ -1.6
BBX-222	ENST00000472032	REPIN1	Q9BWE0	567 aa	Known RBP	5.07	□□□□□ -1.6
BBX-222	ENST00000472032	POLR3E	Q9NVU0	708 aa		5.07	□□□□□ -1.6
BBX-222	ENST00000472032	KNSTRN	Q9Y448	316 aa		5.07	□□□□□ -1.6
BBX-222	ENST00000472032	TET3	O43151	1660 aa		5.07	□□□□□ -1.6
BBX-222	ENST00000472032	DEPDC5	O75140	1603 aa		5.07	□□□□□ -1.6
BBX-222	ENST00000472032	YEATS2	Q9ULM3	1422 aa		5.06	□□□□□ -1.6
BBX-222	ENST00000472032	POLR3A	O14802	1390 aa	Predicted RBP	5.06	□□□□□ -1.6
BBX-222	ENST00000472032	MAP3K4	Q9Y6R4	1608 aa		5.06	□□□□□ -1.6
BBX-222	ENST00000472032	TCHH	Q07283	1943 aa		5.06	□□□□□ -1.6
BBX-222	ENST00000472032	RAB3GAP1	Q15042	981 aa		5.06	□□□□□ -1.6
BBX-222	ENST00000472032	CLEC17A	Q6ZS10	378 aa		5.06	□□□□□ -1.6
BBX-222	ENST00000472032	MTERF4	Q7Z6M4	381 aa	Known RBP	5.06	□□□□□ -1.6
BBX-222	ENST00000472032	MICALL2	Q8IY33	904 aa		5.06	□□□□□ -1.6
BBX-222	ENST00000472032	PANK1	Q8TE04	598 aa		5.06	□□□□□ -1.6
BBX-222	ENST00000472032	DDX12P	Q92771	950 aa		5.06	□□□□□ -1.6
BBX-222	ENST00000472032	ZNF428	Q96B54	188 aa		5.06	□□□□□ -1.6
BBX-222	ENST00000472032	GBP4	Q96PP9	640 aa		5.06	□□□□□ -1.6
BBX-222	ENST00000472032	EPAS1	Q99814	870 aa		5.06	□□□□□ -1.6
BBX-222	ENST00000472032	C22orf23	Q9BZE7	217 aa		5.06	□□□□□ -1.6
BBX-222	ENST00000472032	GDPD2	Q9HCC8	539 aa		5.06	□□□□□ -1.6
BBX-222	ENST00000472032	SNRK	Q9NRH2	765 aa		5.06	□□□□□ -1.6
BBX-222	ENST00000472032	PCDHB15	Q9Y5E8	787 aa		5.06	□□□□□ -1.6
BBX-222	ENST00000472032	SYCP2	Q9BX26	1530 aa		5.06	□□□□□ -1.6
BBX-222	ENST00000472032	QRICH2	Q9H0J4	1663 aa		5.05	□□□□□ -1.6
BBX-222	ENST00000472032	TUBGCP6	Q96RT7	1819 aa		5.05	□□□□□ -1.6
BBX-222	ENST00000472032	APAF1	O14727	1248 aa		5.05	□□□□□ -1.6
BBX-222	ENST00000472032	ST18	O60284	1047 aa		5.05	□□□□□ -1.6
BBX-222	ENST00000472032	ZNF500	O60304	480 aa	Predicted RBP	5.05	□□□□□ -1.6
BBX-222	ENST00000472032	GJA5	P36382	358 aa		5.05	□□□□□ -1.6
BBX-222	ENST00000472032	ABL2	P42684	1182 aa		5.05	□□□□□ -1.6
BBX-222	ENST00000472032	RARS	P54136	660 aa	Known RBP	5.05	□□□□□ -1.6
BBX-222	ENST00000472032	CDCA8	Q53HL2	280 aa		5.05	□□□□□ -1.6
BBX-222	ENST00000472032	CCDC146	Q8IYE0	955 aa		5.05	□□□□□ -1.6
BBX-222	ENST00000472032	MTMR14	Q8NCE2	650 aa		5.05	□□□□□ -1.6
BBX-222	ENST00000472032	CERK	Q8TCT0	537 aa		5.05	□□□□□ -1.6
BBX-222	ENST00000472032	TNPO1	Q92973	898 aa	Known RBP	5.05	□□□□□ -1.6
BBX-222	ENST00000472032	MS4A3	Q96HJ5	214 aa		5.05	□□□□□ -1.6
BBX-222	ENST00000472032	RWDD1	Q9H446	243 aa	Predicted RBP	5.05	□□□□□ -1.6
BBX-222	ENST00000472032	GNE	Q9Y223	722 aa	Known RBP	5.05	□□□□□ -1.6
BBX-222	ENST00000472032	IVNS1ABP	Q9Y6Y0	642 aa		5.05	□□□□□ -1.6
BBX-222	ENST00000472032	ERVK-7	P63135	1459 aa		5.05	□□□□□ -1.6
BBX-222	ENST00000472032	MRC2	Q9UBG0	1479 aa		5.05	□□□□□ -1.6
BBX-222	ENST00000472032	DYNC1I1	O14576	645 aa		5.04	□□□□□ -1.6
BBX-222	ENST00000472032	RLBP1	P12271	317 aa		5.04	□□□□□ -1.6
BBX-222	ENST00000472032	TIE1	P35590	1138 aa		5.04	□□□□□ -1.6
BBX-222	ENST00000472032	SOX11	P35716	441 aa		5.04	□□□□□ -1.6
BBX-222	ENST00000472032	NASP	P49321	788 aa	Predicted RBP	5.04	□□□□□ -1.6
BBX-222	ENST00000472032	ZNF445	P59923	1031 aa		5.04	□□□□□ -1.6
BBX-222	ENST00000472032	EN1	Q05925	392 aa	Predicted RBP	5.04	□□□□□ -1.6
BBX-222	ENST00000472032	UTP14C	Q5TAP6	766 aa	Known RBP	5.04	□□□□□ -1.6
BBX-222	ENST00000472032	PDLIM2	Q96JY6	352 aa		5.04	□□□□□ -1.6
BBX-222	ENST00000472032	NDUFB9	Q9Y6M9	179 aa		5.04	□□□□□ -1.6
BBX-222	ENST00000472032	ATP10B	O94823	1461 aa		5.04	□□□□□ -1.6
BBX-222	ENST00000472032	MROH2A	A6NES4	1674 aa		5.04	□□□□□ -1.6
BBX-222	ENST00000472032	SETBP1	Q9Y6X0	1596 aa		5.04	□□□□□ -1.6
BBX-222	ENST00000472032	MYOM2	P54296	1465 aa		5.03	□□□□□ -1.6
BBX-222	ENST00000472032	RBM47	A0AV96	593 aa	Known RBP	5.03	□□□□□ -1.6
BBX-222	ENST00000472032	TSPY4	P0CV99	314 aa		5.03	□□□□□ -1.6
BBX-222	ENST00000472032	TSPY10	P0CW01	314 aa		5.03	□□□□□ -1.6
BBX-222	ENST00000472032	MSN	P26038	577 aa	Known RBP	5.03	□□□□□ -1.6
BBX-222	ENST00000472032	MCM5	P33992	734 aa		5.03	□□□□□ -1.6
BBX-222	ENST00000472032	RBM10	P98175	930 aa	Known RBP	5.03	□□□□□ -1.6
BBX-222	ENST00000472032	HDAC1	Q13547	482 aa	Predicted RBP	5.03	□□□□□ -1.6
BBX-222	ENST00000472032	MVP	Q14764	893 aa	Known RBP	5.03	□□□□□ -1.6
BBX-222	ENST00000472032	KLHL40	Q2TBA0	621 aa		5.03	□□□□□ -1.6
BBX-222	ENST00000472032	VRTN	Q9H8Y1	702 aa		5.03	□□□□□ -1.6
BBX-222	ENST00000472032	RBM27	Q9P2N5	1060 aa	Known RBP	5.03	□□□□□ -1.6
BBX-222	ENST00000472032	CARMIL2	Q6F5E8	1435 aa		5.03	□□□□□ -1.6
BBX-222	ENST00000472032	SBNO2	Q9Y2G9	1366 aa		5.03	□□□□□ -1.6
BBX-222	ENST00000472032	KIF16B	Q96L93	1317 aa		5.02	□□□□□ -1.61
BBX-222	ENST00000472032	UHRF1BP1L	A0JNW5	1464 aa		5.02	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms