RNA–Protein interactions for RNA: ENST00000471960.5

ARPC1A-204, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

TSL 3

Gene ARPC1A, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-204ENST00000471960 DDX54Q8TDD1 881 aaKnown RBP19.17■□□□□ 0.66
ARPC1A-204ENST00000471960 POLKQ9UBT6 870 aa19.17■□□□□ 0.66
ARPC1A-204ENST00000471960 RGPD3A6NKT7 1758 aaPredicted RBP19.16■□□□□ 0.66
ARPC1A-204ENST00000471960 RGPD4Q7Z3J3 1758 aa19.16■□□□□ 0.66
ARPC1A-204ENST00000471960 ANO8Q9HCE9 1232 aaPredicted RBP19.15■□□□□ 0.66
ARPC1A-204ENST00000471960 BTAF1O14981 1849 aa19.15■□□□□ 0.66
ARPC1A-204ENST00000471960 PLSCR1O15162 318 aa19.14■□□□□ 0.65
ARPC1A-204ENST00000471960 KIF24Q5T7B8 1368 aa19.14■□□□□ 0.65
ARPC1A-204ENST00000471960 SMG6Q86US8 1419 aaKnown RBP19.14■□□□□ 0.65
ARPC1A-204ENST00000471960 ZCRB1Q8TBF4 217 aaKnown RBP19.13■□□□□ 0.65
ARPC1A-204ENST00000471960 WASHC2AQ641Q2 1341 aa19.12■□□□□ 0.65
ARPC1A-204ENST00000471960 DOT1LQ8TEK3 1739 aa19.11■□□□□ 0.65
ARPC1A-204ENST00000471960 TXNRD1Q16881 649 aa19.1■□□□□ 0.65
ARPC1A-204ENST00000471960 EYA1Q99502 592 aa19.1■□□□□ 0.65
ARPC1A-204ENST00000471960 NCAPD2Q15021 1401 aa19.09■□□□□ 0.65
ARPC1A-204ENST00000471960 EIF4A2Q14240 407 aaKnown RBP19.08■□□□□ 0.64
ARPC1A-204ENST00000471960 AMER1Q5JTC6 1135 aaPredicted RBP19.08■□□□□ 0.64
ARPC1A-204ENST00000471960 NBPF14Q5TI25 921 aa19.08■□□□□ 0.64
ARPC1A-204ENST00000471960 RAPGEF4Q8WZA2 1011 aa19.08■□□□□ 0.64
ARPC1A-204ENST00000471960 PDGFDQ9GZP0 370 aaPredicted RBP19.08■□□□□ 0.64
ARPC1A-204ENST00000471960 NSD2O96028 1365 aa19.07■□□□□ 0.64
ARPC1A-204ENST00000471960 TATP17735 454 aaPredicted RBP19.07■□□□□ 0.64
ARPC1A-204ENST00000471960 PRIM1P49642 420 aaKnown RBP19.07■□□□□ 0.64
ARPC1A-204ENST00000471960 MORC1Q86VD1 984 aa19.07■□□□□ 0.64
ARPC1A-204ENST00000471960 KNSTRNQ9Y448 316 aa19.07■□□□□ 0.64
ARPC1A-204ENST00000471960 PKD1L3Q7Z443 1732 aa19.06■□□□□ 0.64
ARPC1A-204ENST00000471960 CYP27B1O15528 508 aa19.05■□□□□ 0.64
ARPC1A-204ENST00000471960 PER1O15534 1290 aaPredicted RBP19.05■□□□□ 0.64
ARPC1A-204ENST00000471960 KCNQ4P56696 695 aa19.05■□□□□ 0.64
ARPC1A-204ENST00000471960 SYTL4Q96C24 671 aaPredicted RBP19.05■□□□□ 0.64
ARPC1A-204ENST00000471960 LRRC4BQ9NT99 713 aa19.05■□□□□ 0.64
ARPC1A-204ENST00000471960 TOGARAM1Q9Y4F4 1720 aa19.04■□□□□ 0.64
ARPC1A-204ENST00000471960 CASZ1Q86V15 1759 aa19.04■□□□□ 0.64
ARPC1A-204ENST00000471960 PAPPAQ13219 1627 aa19.03■□□□□ 0.64
ARPC1A-204ENST00000471960 PCDH11XQ9BZA7 1347 aa19.01■□□□□ 0.63
ARPC1A-204ENST00000471960 PCDH11YQ9BZA8 1340 aa19.01■□□□□ 0.63
ARPC1A-204ENST00000471960 CNGB1Q14028 1251 aaPredicted RBP19■□□□□ 0.63
ARPC1A-204ENST00000471960 ZNF827Q17R98 1081 aa19■□□□□ 0.63
ARPC1A-204ENST00000471960 CC2D1BQ5T0F9 858 aaKnown RBP19■□□□□ 0.63
ARPC1A-204ENST00000471960 ITGB4P16144 1822 aa19■□□□□ 0.63
ARPC1A-204ENST00000471960 LY75O60449 1722 aa19■□□□□ 0.63
ARPC1A-204ENST00000471960 IGSF1Q8N6C5 1336 aa19■□□□□ 0.63
ARPC1A-204ENST00000471960 SLC15A2Q16348 729 aa18.99■□□□□ 0.63
ARPC1A-204ENST00000471960 AEBP1Q8IUX7 1158 aa18.99■□□□□ 0.63
ARPC1A-204ENST00000471960 STK32BQ9NY57 414 aa18.97■□□□□ 0.63
ARPC1A-204ENST00000471960 TUBGCP6Q96RT7 1819 aa18.95■□□□□ 0.62
ARPC1A-204ENST00000471960 ZBTB7AO95365 584 aa18.95■□□□□ 0.62
ARPC1A-204ENST00000471960 IL13P35225 146 aa18.94■□□□□ 0.62
ARPC1A-204ENST00000471960 MTHFSP49914 203 aa18.94■□□□□ 0.62
ARPC1A-204ENST00000471960 MPRIPQ6WCQ1 1025 aa18.94■□□□□ 0.62
ARPC1A-204ENST00000471960 SPG7Q9UQ90 795 aa18.94■□□□□ 0.62
ARPC1A-204ENST00000471960 PHKG2P15735 406 aa18.93■□□□□ 0.62
ARPC1A-204ENST00000471960 NKX1-1Q15270 411 aaPredicted RBP18.93■□□□□ 0.62
ARPC1A-204ENST00000471960 AKT1S1Q96B36 256 aa18.93■□□□□ 0.62
ARPC1A-204ENST00000471960 PIGBQ92521 554 aa18.92■□□□□ 0.62
ARPC1A-204ENST00000471960 SPON1Q9HCB6 807 aa18.92■□□□□ 0.62
ARPC1A-204ENST00000471960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.92■□□□□ 0.62
ARPC1A-204ENST00000471960 ATF5Q9Y2D1 282 aaPredicted RBP18.92■□□□□ 0.62
ARPC1A-204ENST00000471960 SLC27A3Q5K4L6 730 aa18.91■□□□□ 0.62
ARPC1A-204ENST00000471960 SULT6B1Q6IMI4 303 aa18.9■□□□□ 0.62
ARPC1A-204ENST00000471960 CCNL1Q9UK58 526 aaPredicted RBP18.9■□□□□ 0.62
ARPC1A-204ENST00000471960 PTGER2P43116 358 aa18.89■□□□□ 0.61
ARPC1A-204ENST00000471960 IFNL2Q8IZJ0 200 aa18.89■□□□□ 0.61
ARPC1A-204ENST00000471960 PALLDQ8WX93 1383 aa18.89■□□□□ 0.61
ARPC1A-204ENST00000471960 NPC1L1Q9UHC9 1359 aa18.89■□□□□ 0.61
ARPC1A-204ENST00000471960 TAF1LQ8IZX4 1826 aa18.88■□□□□ 0.61
ARPC1A-204ENST00000471960 COL3A1P02461 1466 aaPredicted RBP18.88■□□□□ 0.61
ARPC1A-204ENST00000471960 KDM6AO15550 1401 aaPredicted RBP18.87■□□□□ 0.61
ARPC1A-204ENST00000471960 C5P01031 1676 aa18.87■□□□□ 0.61
ARPC1A-204ENST00000471960 KDRP35968 1356 aa18.87■□□□□ 0.61
ARPC1A-204ENST00000471960 QSER1Q2KHR3 1735 aa18.87■□□□□ 0.61
ARPC1A-204ENST00000471960 ZNF530Q6P9A1 599 aaPredicted RBP18.87■□□□□ 0.61
ARPC1A-204ENST00000471960 PNPLA7Q6ZV29 1317 aa18.87■□□□□ 0.61
ARPC1A-204ENST00000471960 HMOX1P09601 288 aa18.86■□□□□ 0.61
ARPC1A-204ENST00000471960 ASAP1Q9ULH1 1129 aa18.86■□□□□ 0.61
ARPC1A-204ENST00000471960 PLEKHO1Q53GL0 409 aaPredicted RBP18.85■□□□□ 0.61
ARPC1A-204ENST00000471960 SGIP1Q9BQI5 828 aa18.85■□□□□ 0.61
ARPC1A-204ENST00000471960 SMIM5Q71RC9 77 aa18.84■□□□□ 0.61
ARPC1A-204ENST00000471960 AMIGO3Q86WK7 504 aa18.84■□□□□ 0.61
ARPC1A-204ENST00000471960 TMOD3Q9NYL9 352 aa18.84■□□□□ 0.61
ARPC1A-204ENST00000471960 TFCP2L1Q9NZI6 479 aa18.84■□□□□ 0.61
ARPC1A-204ENST00000471960 PPP1R1BQ9UD71 204 aaPredicted RBP18.84■□□□□ 0.61
ARPC1A-204ENST00000471960 PLEKHG2Q9H7P9 1386 aa18.83■□□□□ 0.61
ARPC1A-204ENST00000471960 MTFR1LQ9H019 292 aa18.83■□□□□ 0.6
ARPC1A-204ENST00000471960 DIAPH1O60610 1272 aaKnown RBP18.82■□□□□ 0.6
ARPC1A-204ENST00000471960 ATG3Q9NT62 314 aa18.82■□□□□ 0.6
ARPC1A-204ENST00000471960 C4BP0C0L5 1744 aa18.81■□□□□ 0.6
ARPC1A-204ENST00000471960 AMOTQ4VCS5 1084 aa18.81■□□□□ 0.6
ARPC1A-204ENST00000471960 SMARCC1Q92922 1105 aaPredicted RBP18.81■□□□□ 0.6
ARPC1A-204ENST00000471960 ITPK1Q13572 414 aa18.8■□□□□ 0.6
ARPC1A-204ENST00000471960 COL23A1Q86Y22 540 aaPredicted RBP18.8■□□□□ 0.6
ARPC1A-204ENST00000471960 LINC00116Q8NCU8 138 aa18.8■□□□□ 0.6
ARPC1A-204ENST00000471960 DCAF5Q96JK2 942 aa18.8■□□□□ 0.6
ARPC1A-204ENST00000471960 SLC4A9Q96Q91 983 aa18.8■□□□□ 0.6
ARPC1A-204ENST00000471960 SCN11AQ9UI33 1791 aa18.79■□□□□ 0.6
ARPC1A-204ENST00000471960 LOC102724428A0A0B4J2F2 783 aa18.79■□□□□ 0.6
ARPC1A-204ENST00000471960 ERVV-2B6SEH9 535 aa18.79■□□□□ 0.6
ARPC1A-204ENST00000471960 SIK1P57059 783 aa18.79■□□□□ 0.6
ARPC1A-204ENST00000471960 COL24A1Q17RW2 1714 aa18.79■□□□□ 0.6
ARPC1A-204ENST00000471960 VIRMAQ69YN4 1812 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms