RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 TATP17735 454 aaPredicted RBP15.35■□□□□ 0.05
FN1-217ENST00000471193 YTHDC1Q96MU7 727 aaKnown RBP15.35■□□□□ 0.05
FN1-217ENST00000471193 USP35Q9P2H5 1018 aa15.35■□□□□ 0.05
FN1-217ENST00000471193 TMPOP42166 694 aaKnown RBP15.34■□□□□ 0.05
FN1-217ENST00000471193 NFE2L2Q16236 605 aa15.34■□□□□ 0.05
FN1-217ENST00000471193 TNS2Q63HR2 1409 aa15.34■□□□□ 0.05
FN1-217ENST00000471193 MTHFSDQ2M296 383 aaKnown RBP15.33■□□□□ 0.04
FN1-217ENST00000471193 AMOTQ4VCS5 1084 aa15.33■□□□□ 0.04
FN1-217ENST00000471193 NCBP3Q53F19 620 aaKnown RBP15.33■□□□□ 0.04
FN1-217ENST00000471193 BARGINQ6ZT62 677 aa15.33■□□□□ 0.04
FN1-217ENST00000471193 GAS2L2Q8NHY3 880 aa15.33■□□□□ 0.04
FN1-217ENST00000471193 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.33■□□□□ 0.04
FN1-217ENST00000471193 TRPC5Q9UL62 973 aaPredicted RBP15.33■□□□□ 0.04
FN1-217ENST00000471193 CCDC9Q9Y3X0 531 aaKnown RBP15.33■□□□□ 0.04
FN1-217ENST00000471193 DLG5Q8TDM6 1919 aa15.33■□□□□ 0.04
FN1-217ENST00000471193 SENP3-EIF4A1A0A087X0R7 540 aa15.32■□□□□ 0.04
FN1-217ENST00000471193 PLEKHO1Q53GL0 409 aaPredicted RBP15.32■□□□□ 0.04
FN1-217ENST00000471193 NGEFQ8N5V2 710 aa15.32■□□□□ 0.04
FN1-217ENST00000471193 CDCA7Q9BWT1 371 aaPredicted RBP15.32■□□□□ 0.04
FN1-217ENST00000471193 RRP7AQ9Y3A4 280 aaKnown RBP15.32■□□□□ 0.04
FN1-217ENST00000471193 ZBED9Q6R2W3 1325 aa15.32■□□□□ 0.04
FN1-217ENST00000471193 ZNF772Q68DY9 489 aaPredicted RBP15.31■□□□□ 0.04
FN1-217ENST00000471193 PHF23Q9BUL5 403 aaPredicted RBP15.31■□□□□ 0.04
FN1-217ENST00000471193 MAP3K5Q99683 1374 aa15.31■□□□□ 0.04
FN1-217ENST00000471193 ADAMTS7Q9UKP4 1686 aa15.31■□□□□ 0.04
FN1-217ENST00000471193 CCDC27Q2M243 656 aa15.3■□□□□ 0.04
FN1-217ENST00000471193 ZNF521Q96K83 1311 aa15.3■□□□□ 0.04
FN1-217ENST00000471193 GJD4Q96KN9 370 aaPredicted RBP15.3■□□□□ 0.04
FN1-217ENST00000471193 SPG7Q9UQ90 795 aa15.3■□□□□ 0.04
FN1-217ENST00000471193 PCDH11XQ9BZA7 1347 aa15.29■□□□□ 0.04
FN1-217ENST00000471193 PCDH11YQ9BZA8 1340 aa15.29■□□□□ 0.04
FN1-217ENST00000471193 RIPK4P57078 832 aa15.29■□□□□ 0.04
FN1-217ENST00000471193 NEUROD2Q15784 382 aa15.29■□□□□ 0.04
FN1-217ENST00000471193 ZNF530Q6P9A1 599 aaPredicted RBP15.29■□□□□ 0.04
FN1-217ENST00000471193 LMOD3Q0VAK6 560 aa15.28■□□□□ 0.04
FN1-217ENST00000471193 FAM98CQ17RN3 349 aaKnown RBP15.28■□□□□ 0.04
FN1-217ENST00000471193 ZCRB1Q8TBF4 217 aaKnown RBP15.28■□□□□ 0.04
FN1-217ENST00000471193 QTRT2Q9H974 415 aaKnown RBP15.28■□□□□ 0.04
FN1-217ENST00000471193 TRIM35Q9UPQ4 493 aa15.28■□□□□ 0.04
FN1-217ENST00000471193 AKAP4Q5JQC9 854 aa15.27■□□□□ 0.04
FN1-217ENST00000471193 SALL2Q9Y467 1007 aaPredicted RBP15.27■□□□□ 0.04
FN1-217ENST00000471193 KDM6AO15550 1401 aaPredicted RBP15.26■□□□□ 0.03
FN1-217ENST00000471193 GNAT3A8MTJ3 354 aa15.26■□□□□ 0.03
FN1-217ENST00000471193 CYP27B1O15528 508 aa15.26■□□□□ 0.03
FN1-217ENST00000471193 HTATSF1O43719 755 aaKnown RBP15.26■□□□□ 0.03
FN1-217ENST00000471193 PHKG2P15735 406 aa15.26■□□□□ 0.03
FN1-217ENST00000471193 C1orf141Q5JVX7 400 aa15.26■□□□□ 0.03
FN1-217ENST00000471193 WWC1Q8IX03 1113 aa15.26■□□□□ 0.03
FN1-217ENST00000471193 MRC1P22897 1456 aa15.26■□□□□ 0.03
FN1-217ENST00000471193 CEMIPQ8WUJ3 1361 aa15.25■□□□□ 0.03
FN1-217ENST00000471193 IFNL2Q8IZJ0 200 aa15.25■□□□□ 0.03
FN1-217ENST00000471193 RGS17Q9UGC6 210 aaPredicted RBP15.25■□□□□ 0.03
FN1-217ENST00000471193 SCN11AQ9UI33 1791 aa15.24■□□□□ 0.03
FN1-217ENST00000471193 TOGARAM1Q9Y4F4 1720 aa15.24■□□□□ 0.03
FN1-217ENST00000471193 ONECUT3O60422 494 aaPredicted RBP15.24■□□□□ 0.03
FN1-217ENST00000471193 DDB1Q16531 1140 aa15.24■□□□□ 0.03
FN1-217ENST00000471193 VIRMAQ69YN4 1812 aaKnown RBP15.24■□□□□ 0.03
FN1-217ENST00000471193 EXOC5O00471 708 aa15.23■□□□□ 0.03
FN1-217ENST00000471193 RBM6P78332 1123 aaKnown RBP15.23■□□□□ 0.03
FN1-217ENST00000471193 RTF1Q92541 710 aaKnown RBP15.23■□□□□ 0.03
FN1-217ENST00000471193 HSP90AB1P08238 724 aaKnown RBP15.22■□□□□ 0.03
FN1-217ENST00000471193 DCTN1Q14203 1278 aa15.22■□□□□ 0.03
FN1-217ENST00000471193 NKX1-1Q15270 411 aaPredicted RBP15.22■□□□□ 0.03
FN1-217ENST00000471193 MCM10Q7L590 875 aa15.22■□□□□ 0.03
FN1-217ENST00000471193 WDR63Q8IWG1 891 aa15.22■□□□□ 0.03
FN1-217ENST00000471193 THUMPD2Q9BTF0 503 aaKnown RBP15.22■□□□□ 0.03
FN1-217ENST00000471193 SIPA1L3O60292 1781 aaPredicted RBP15.21■□□□□ 0.03
FN1-217ENST00000471193 IL16Q14005 1332 aa15.21■□□□□ 0.03
FN1-217ENST00000471193 IL17REQ8NFR9 667 aa15.21■□□□□ 0.03
FN1-217ENST00000471193 DDX54Q8TDD1 881 aaKnown RBP15.21■□□□□ 0.03
FN1-217ENST00000471193 DOT1LQ8TEK3 1739 aa15.2■□□□□ 0.02
FN1-217ENST00000471193 RGS12O14924 1447 aa15.2■□□□□ 0.02
FN1-217ENST00000471193 A0A0G2JS52 829 aa15.2■□□□□ 0.02
FN1-217ENST00000471193 RNMTO43148 476 aaKnown RBP15.2■□□□□ 0.02
FN1-217ENST00000471193 MYT1Q01538 1121 aa15.2■□□□□ 0.02
FN1-217ENST00000471193 CALD1Q05682 793 aaKnown RBP15.2■□□□□ 0.02
FN1-217ENST00000471193 GOLGA2Q08379 1002 aa15.2■□□□□ 0.02
FN1-217ENST00000471193 PDE3BQ13370 1112 aa15.2■□□□□ 0.02
FN1-217ENST00000471193 MPRIPQ6WCQ1 1025 aa15.2■□□□□ 0.02
FN1-217ENST00000471193 DCAF5Q96JK2 942 aa15.2■□□□□ 0.02
FN1-217ENST00000471193 POTEAQ6S8J7 498 aa15.19■□□□□ 0.02
FN1-217ENST00000471193 SEPT12Q8IYM1 358 aa15.19■□□□□ 0.02
FN1-217ENST00000471193 MARCH10Q8NA82 808 aaPredicted RBP15.19■□□□□ 0.02
FN1-217ENST00000471193 LGR6Q9HBX8 967 aa15.19■□□□□ 0.02
FN1-217ENST00000471193 BRWD3Q6RI45 1802 aa15.18■□□□□ 0.02
FN1-217ENST00000471193 RXRBP28702 533 aa15.18■□□□□ 0.02
FN1-217ENST00000471193 SPINK5Q9NQ38 1064 aaPredicted RBP15.18■□□□□ 0.02
FN1-217ENST00000471193 KDM3BQ7LBC6 1761 aa15.18■□□□□ 0.02
FN1-217ENST00000471193 BCL9O00512 1426 aa15.17■□□□□ 0.02
FN1-217ENST00000471193 PAPPAQ13219 1627 aa15.17■□□□□ 0.02
FN1-217ENST00000471193 E9PSI1 815 aa15.17■□□□□ 0.02
FN1-217ENST00000471193 CDCA7LQ96GN5 454 aa15.17■□□□□ 0.02
FN1-217ENST00000471193 IFT57Q9NWB7 429 aa15.17■□□□□ 0.02
FN1-217ENST00000471193 ZNF853P0CG23 659 aa15.16■□□□□ 0.02
FN1-217ENST00000471193 SLFN5Q08AF3 891 aa15.16■□□□□ 0.02
FN1-217ENST00000471193 SLC52A2Q9HAB3 445 aa15.16■□□□□ 0.02
FN1-217ENST00000471193 ERVV-2B6SEH9 535 aa15.15■□□□□ 0.02
FN1-217ENST00000471193 GNAI1P63096 354 aa15.15■□□□□ 0.02
FN1-217ENST00000471193 TEFQ10587 303 aa15.15■□□□□ 0.02
FN1-217ENST00000471193 TRMT2AQ8IZ69 625 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms