RNA–Protein interactions for RNA: ENST00000471061.1

PDCD11-203, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 410 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-203ENST00000471061 RREB1Q92766 1687 aa17.19■□□□□ 0.34
PDCD11-203ENST00000471061 SYTL4Q96C24 671 aaPredicted RBP17.18■□□□□ 0.34
PDCD11-203ENST00000471061 NUP188Q5SRE5 1749 aa17.18■□□□□ 0.34
PDCD11-203ENST00000471061 MEGF6O75095 1541 aa17.17■□□□□ 0.34
PDCD11-203ENST00000471061 EIF4A2Q14240 407 aaKnown RBP17.17■□□□□ 0.34
PDCD11-203ENST00000471061 UTRNP46939 3433 aa17.17■□□□□ 0.34
PDCD11-203ENST00000471061 PARD3Q8TEW0 1356 aa17.16■□□□□ 0.34
PDCD11-203ENST00000471061 PER1O15534 1290 aaPredicted RBP17.16■□□□□ 0.34
PDCD11-203ENST00000471061 KCNQ2O43526 872 aa17.16■□□□□ 0.34
PDCD11-203ENST00000471061 EYA1Q99502 592 aa17.16■□□□□ 0.34
PDCD11-203ENST00000471061 BCL9O00512 1426 aa17.15■□□□□ 0.34
PDCD11-203ENST00000471061 NBPF14Q5TI25 921 aa17.15■□□□□ 0.34
PDCD11-203ENST00000471061 PTF1AQ7RTS3 328 aa17.15■□□□□ 0.34
PDCD11-203ENST00000471061 SPG7Q9UQ90 795 aa17.14■□□□□ 0.33
PDCD11-203ENST00000471061 PCDH11XQ9BZA7 1347 aa17.14■□□□□ 0.33
PDCD11-203ENST00000471061 PCDH11YQ9BZA8 1340 aa17.14■□□□□ 0.33
PDCD11-203ENST00000471061 MTHFSP49914 203 aa17.13■□□□□ 0.33
PDCD11-203ENST00000471061 PLSCR1O15162 318 aa17.12■□□□□ 0.33
PDCD11-203ENST00000471061 ZEB1P37275 1124 aaPredicted RBP17.12■□□□□ 0.33
PDCD11-203ENST00000471061 PRIM1P49642 420 aaKnown RBP17.11■□□□□ 0.33
PDCD11-203ENST00000471061 NHSQ6T4R5 1651 aa17.1■□□□□ 0.33
PDCD11-203ENST00000471061 NPC1L1Q9UHC9 1359 aa17.09■□□□□ 0.33
PDCD11-203ENST00000471061 IGSF1Q8N6C5 1336 aa17.08■□□□□ 0.32
PDCD11-203ENST00000471061 TXNRD1Q16881 649 aa17.08■□□□□ 0.32
PDCD11-203ENST00000471061 BTAF1O14981 1849 aa17.07■□□□□ 0.32
PDCD11-203ENST00000471061 SHANK3Q9BYB0 1731 aa17.07■□□□□ 0.32
PDCD11-203ENST00000471061 DIAPH1O60610 1272 aaKnown RBP17.07■□□□□ 0.32
PDCD11-203ENST00000471061 SULT6B1Q6IMI4 303 aa17.07■□□□□ 0.32
PDCD11-203ENST00000471061 DOT1LQ8TEK3 1739 aa17.07■□□□□ 0.32
PDCD11-203ENST00000471061 CYP27B1O15528 508 aa17.06■□□□□ 0.32
PDCD11-203ENST00000471061 PLEKHO1Q53GL0 409 aaPredicted RBP17.06■□□□□ 0.32
PDCD11-203ENST00000471061 CFAP53Q96M91 514 aa17.06■□□□□ 0.32
PDCD11-203ENST00000471061 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.06■□□□□ 0.324e-8■■■■□ 21.4
PDCD11-203ENST00000471061 RGPD3A6NKT7 1758 aaPredicted RBP17.06■□□□□ 0.32
PDCD11-203ENST00000471061 RGPD4Q7Z3J3 1758 aa17.06■□□□□ 0.32
PDCD11-203ENST00000471061 IL13P35225 146 aa17.05■□□□□ 0.32
PDCD11-203ENST00000471061 MPRIPQ6WCQ1 1025 aa17.05■□□□□ 0.32
PDCD11-203ENST00000471061 IFNL2Q8IZJ0 200 aa17.05■□□□□ 0.32
PDCD11-203ENST00000471061 PDGFDQ9GZP0 370 aaPredicted RBP17.05■□□□□ 0.32
PDCD11-203ENST00000471061 ANO8Q9HCE9 1232 aaPredicted RBP17.05■□□□□ 0.32
PDCD11-203ENST00000471061 STK32BQ9NY57 414 aa17.05■□□□□ 0.32
PDCD11-203ENST00000471061 NCAPD2Q15021 1401 aa17.04■□□□□ 0.32
PDCD11-203ENST00000471061 U2SURPO15042 1029 aaKnown RBP17.04■□□□□ 0.32
PDCD11-203ENST00000471061 AEBP1Q8IUX7 1158 aa17.04■□□□□ 0.32
PDCD11-203ENST00000471061 PKD1L3Q7Z443 1732 aa17.04■□□□□ 0.32
PDCD11-203ENST00000471061 HMOX1P09601 288 aa17.03■□□□□ 0.32
PDCD11-203ENST00000471061 AMOTQ4VCS5 1084 aa17.03■□□□□ 0.32
PDCD11-203ENST00000471061 C1orf141Q5JVX7 400 aa17.03■□□□□ 0.32
PDCD11-203ENST00000471061 ZNF530Q6P9A1 599 aaPredicted RBP17.03■□□□□ 0.32
PDCD11-203ENST00000471061 PROM2Q8N271 834 aa17.03■□□□□ 0.32
PDCD11-203ENST00000471061 DDX10Q13206 875 aaKnown RBP17.02■□□□□ 0.32
PDCD11-203ENST00000471061 GOLGB1Q14789 3259 aaKnown RBP17.01■□□□□ 0.31
PDCD11-203ENST00000471061 HSP90AB1P08238 724 aaKnown RBP17.01■□□□□ 0.31
PDCD11-203ENST00000471061 PHKG2P15735 406 aa17.01■□□□□ 0.31
PDCD11-203ENST00000471061 TMOD3Q9NYL9 352 aa17.01■□□□□ 0.31
PDCD11-203ENST00000471061 CASZ1Q86V15 1759 aa17■□□□□ 0.31
PDCD11-203ENST00000471061 PPP2R1AP30153 589 aa16.99■□□□□ 0.31
PDCD11-203ENST00000471061 SLC27A3Q5K4L6 730 aa16.99■□□□□ 0.31
PDCD11-203ENST00000471061 SPON1Q9HCB6 807 aa16.99■□□□□ 0.31
PDCD11-203ENST00000471061 CCNL1Q9UK58 526 aaPredicted RBP16.99■□□□□ 0.31
PDCD11-203ENST00000471061 NUDCQ9Y266 331 aa16.99■□□□□ 0.31
PDCD11-203ENST00000471061 NKX1-1Q15270 411 aaPredicted RBP16.98■□□□□ 0.31
PDCD11-203ENST00000471061 SMARCC1Q92922 1105 aaPredicted RBP16.98■□□□□ 0.31
PDCD11-203ENST00000471061 PLEKHG2Q9H7P9 1386 aa16.98■□□□□ 0.31
PDCD11-203ENST00000471061 ITGB4P16144 1822 aa16.98■□□□□ 0.31
PDCD11-203ENST00000471061 YY1P25490 414 aa16.97■□□□□ 0.31
PDCD11-203ENST00000471061 KCNQ4P56696 695 aa16.97■□□□□ 0.31
PDCD11-203ENST00000471061 SLC15A2Q16348 729 aa16.97■□□□□ 0.31
PDCD11-203ENST00000471061 CABP4P57796 275 aa16.96■□□□□ 0.31
PDCD11-203ENST00000471061 PIGBQ92521 554 aa16.96■□□□□ 0.31
PDCD11-203ENST00000471061 DCAF5Q96JK2 942 aa16.96■□□□□ 0.31
PDCD11-203ENST00000471061 LRRC4BQ9NT99 713 aa16.96■□□□□ 0.31
PDCD11-203ENST00000471061 KDRP35968 1356 aa16.96■□□□□ 0.31
PDCD11-203ENST00000471061 PALLDQ8WX93 1383 aa16.95■□□□□ 0.3
PDCD11-203ENST00000471061 TOGARAM1Q9Y4F4 1720 aa16.94■□□□□ 0.3
PDCD11-203ENST00000471061 U2AF1L5P0DN76 240 aaPredicted RBP16.94■□□□□ 0.3
PDCD11-203ENST00000471061 HMGB2P26583 209 aaKnown RBP16.94■□□□□ 0.3
PDCD11-203ENST00000471061 U2AF1Q01081 240 aaKnown RBP eCLIP16.94■□□□□ 0.3
PDCD11-203ENST00000471061 TFCP2L1Q9NZI6 479 aa16.94■□□□□ 0.3
PDCD11-203ENST00000471061 ERVV-2B6SEH9 535 aa16.93■□□□□ 0.3
PDCD11-203ENST00000471061 PTGER2P43116 358 aa16.93■□□□□ 0.3
PDCD11-203ENST00000471061 PPP1R1BQ9UD71 204 aaPredicted RBP16.93■□□□□ 0.3
PDCD11-203ENST00000471061 MSH5O43196 834 aa16.92■□□□□ 0.3
PDCD11-203ENST00000471061 ZBTB7AO95365 584 aa16.92■□□□□ 0.3
PDCD11-203ENST00000471061 AKAP4Q5JQC9 854 aa16.92■□□□□ 0.3
PDCD11-203ENST00000471061 COL3A1P02461 1466 aaPredicted RBP16.92■□□□□ 0.3
PDCD11-203ENST00000471061 LY75O60449 1722 aa16.91■□□□□ 0.3
PDCD11-203ENST00000471061 RALBP1Q15311 655 aa16.91■□□□□ 0.3
PDCD11-203ENST00000471061 ZNF827Q17R98 1081 aa16.91■□□□□ 0.3
PDCD11-203ENST00000471061 ASAP1Q9ULH1 1129 aa16.91■□□□□ 0.3
PDCD11-203ENST00000471061 NEFMP07197 916 aa16.9■□□□□ 0.3
PDCD11-203ENST00000471061 MTHFSDQ2M296 383 aaKnown RBP16.9■□□□□ 0.3
PDCD11-203ENST00000471061 RBM42Q9BTD8 480 aaKnown RBP16.9■□□□□ 0.3
PDCD11-203ENST00000471061 PRKAR2BP31323 418 aa16.89■□□□□ 0.29
PDCD11-203ENST00000471061 GAS2L2Q8NHY3 880 aa16.89■□□□□ 0.29
PDCD11-203ENST00000471061 ATF5Q9Y2D1 282 aaPredicted RBP16.89■□□□□ 0.29
PDCD11-203ENST00000471061 LOC102724428A0A0B4J2F2 783 aa16.88■□□□□ 0.29
PDCD11-203ENST00000471061 ATP6V1AP38606 617 aa16.88■□□□□ 0.29
PDCD11-203ENST00000471061 SIK1P57059 783 aa16.88■□□□□ 0.29
PDCD11-203ENST00000471061 NFATC2IPQ8NCF5 419 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms