RNA–Protein interactions for RNA: ENST00000471042.1

LAMA5-207, Transcript of laminin subunit alpha 5, humanhuman

TSL 2

Gene LAMA5, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-207ENST00000471042 NBPF4Q96M43 638 aa19.02■□□□□ 0.64
LAMA5-207ENST00000471042 SHANK3Q9BYB0 1731 aa19.01■□□□□ 0.63
LAMA5-207ENST00000471042 DIAPH1O60610 1272 aaKnown RBP19.01■□□□□ 0.63
LAMA5-207ENST00000471042 USHBP1Q8N6Y0 703 aa19.01■□□□□ 0.63
LAMA5-207ENST00000471042 NHSQ6T4R5 1651 aa19.01■□□□□ 0.63
LAMA5-207ENST00000471042 MARCH10Q8NA82 808 aaPredicted RBP18.99■□□□□ 0.63
LAMA5-207ENST00000471042 CAMKK2Q96RR4 588 aa18.99■□□□□ 0.63
LAMA5-207ENST00000471042 EYA1Q99502 592 aa18.99■□□□□ 0.63
LAMA5-207ENST00000471042 KAT6BQ8WYB5 2073 aa18.98■□□□□ 0.63
LAMA5-207ENST00000471042 APBA3O96018 575 aa18.98■□□□□ 0.63
LAMA5-207ENST00000471042 IL2RBP14784 551 aa18.98■□□□□ 0.63
LAMA5-207ENST00000471042 IL13P35225 146 aa18.98■□□□□ 0.63
LAMA5-207ENST00000471042 EZH2Q15910 746 aaKnown RBP18.98■□□□□ 0.63
LAMA5-207ENST00000471042 LRP5O75197 1615 aa18.97■□□□□ 0.63
LAMA5-207ENST00000471042 EXOC5O00471 708 aa18.97■□□□□ 0.63
LAMA5-207ENST00000471042 NUDCQ9Y266 331 aa18.97■□□□□ 0.63
LAMA5-207ENST00000471042 U2SURPO15042 1029 aaKnown RBP18.96■□□□□ 0.63
LAMA5-207ENST00000471042 RAPGEF4Q8WZA2 1011 aa18.96■□□□□ 0.63
LAMA5-207ENST00000471042 IGSF1Q8N6C5 1336 aa18.96■□□□□ 0.63
LAMA5-207ENST00000471042 BTAF1O14981 1849 aa18.95■□□□□ 0.62
LAMA5-207ENST00000471042 COL3A1P02461 1466 aaPredicted RBP18.95■□□□□ 0.62
LAMA5-207ENST00000471042 TATP17735 454 aaPredicted RBP18.94■□□□□ 0.62
LAMA5-207ENST00000471042 DIEXFQ68CQ4 756 aaKnown RBP18.93■□□□□ 0.62
LAMA5-207ENST00000471042 SULT6B1Q6IMI4 303 aa18.93■□□□□ 0.62
LAMA5-207ENST00000471042 DOT1LQ8TEK3 1739 aa18.92■□□□□ 0.62
LAMA5-207ENST00000471042 BCL11BQ9C0K0 894 aaPredicted RBP18.92■□□□□ 0.62
LAMA5-207ENST00000471042 HMOX1P09601 288 aa18.91■□□□□ 0.62
LAMA5-207ENST00000471042 NCAPD2Q15021 1401 aa18.91■□□□□ 0.62
LAMA5-207ENST00000471042 MEGF6O75095 1541 aa18.9■□□□□ 0.62
LAMA5-207ENST00000471042 PSDA5PKW4 1024 aaPredicted RBP18.9■□□□□ 0.62
LAMA5-207ENST00000471042 U2AF1L5P0DN76 240 aaPredicted RBP18.9■□□□□ 0.62
LAMA5-207ENST00000471042 U2AF1Q01081 240 aaKnown RBP eCLIP18.9■□□□□ 0.62
LAMA5-207ENST00000471042 PTF1AQ7RTS3 328 aa18.9■□□□□ 0.62
LAMA5-207ENST00000471042 AEBP1Q8IUX7 1158 aa18.9■□□□□ 0.62
LAMA5-207ENST00000471042 PLSCR1O15162 318 aa18.89■□□□□ 0.61
LAMA5-207ENST00000471042 PKD1L3Q7Z443 1732 aa18.88■□□□□ 0.61
LAMA5-207ENST00000471042 ZCRB1Q8TBF4 217 aaKnown RBP18.88■□□□□ 0.61
LAMA5-207ENST00000471042 KDRP35968 1356 aa18.86■□□□□ 0.61
LAMA5-207ENST00000471042 R3HDM1Q15032 1099 aaKnown RBP18.86■□□□□ 0.61
LAMA5-207ENST00000471042 DDX54Q8TDD1 881 aaKnown RBP18.86■□□□□ 0.61
LAMA5-207ENST00000471042 SPG7Q9UQ90 795 aa18.86■□□□□ 0.61
LAMA5-207ENST00000471042 WDR43Q15061 677 aaKnown RBP eCLIP18.85■□□□□ 0.611e-8■■□□□ 11.8
LAMA5-207ENST00000471042 PLEKHO1Q53GL0 409 aaPredicted RBP18.85■□□□□ 0.61
LAMA5-207ENST00000471042 CASZ1Q86V15 1759 aa18.84■□□□□ 0.61
LAMA5-207ENST00000471042 MRS2Q9HD23 443 aa18.84■□□□□ 0.61
LAMA5-207ENST00000471042 LY75O60449 1722 aa18.83■□□□□ 0.61
LAMA5-207ENST00000471042 PCDH11XQ9BZA7 1347 aa18.83■□□□□ 0.61
LAMA5-207ENST00000471042 PCDH11YQ9BZA8 1340 aa18.83■□□□□ 0.61
LAMA5-207ENST00000471042 KCNQ2O43526 872 aa18.83■□□□□ 0.6
LAMA5-207ENST00000471042 FCHSD2O94868 740 aa18.83■□□□□ 0.6
LAMA5-207ENST00000471042 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.83■□□□□ 0.6
LAMA5-207ENST00000471042 PLEKHG2Q9H7P9 1386 aa18.82■□□□□ 0.6
LAMA5-207ENST00000471042 PAPPAQ13219 1627 aa18.82■□□□□ 0.6
LAMA5-207ENST00000471042 ITGB4P16144 1822 aa18.82■□□□□ 0.6
LAMA5-207ENST00000471042 NEFMP07197 916 aa18.82■□□□□ 0.6
LAMA5-207ENST00000471042 PRKAR2BP31323 418 aa18.82■□□□□ 0.6
LAMA5-207ENST00000471042 AMOTQ4VCS5 1084 aa18.82■□□□□ 0.6
LAMA5-207ENST00000471042 CCDC184Q52MB2 194 aa18.82■□□□□ 0.6
LAMA5-207ENST00000471042 NBPF14Q5TI25 921 aa18.82■□□□□ 0.6
LAMA5-207ENST00000471042 ACSBG1Q96GR2 724 aa18.82■□□□□ 0.6
LAMA5-207ENST00000471042 SRCAPQ6ZRS2 3230 aa18.81■□□□□ 0.6
LAMA5-207ENST00000471042 RSPH6AQ9H0K4 717 aa18.81■□□□□ 0.6
LAMA5-207ENST00000471042 PNNQ9H307 717 aaKnown RBP18.81■□□□□ 0.6
LAMA5-207ENST00000471042 TOGARAM1Q9Y4F4 1720 aa18.8■□□□□ 0.6
LAMA5-207ENST00000471042 ZNF530Q6P9A1 599 aaPredicted RBP18.8■□□□□ 0.6
LAMA5-207ENST00000471042 PROM2Q8N271 834 aa18.8■□□□□ 0.6
LAMA5-207ENST00000471042 QSER1Q2KHR3 1735 aa18.79■□□□□ 0.6
LAMA5-207ENST00000471042 CYP27B1O15528 508 aa18.78■□□□□ 0.6
LAMA5-207ENST00000471042 C1orf141Q5JVX7 400 aa18.78■□□□□ 0.6
LAMA5-207ENST00000471042 IFNL2Q8IZJ0 200 aa18.78■□□□□ 0.6
LAMA5-207ENST00000471042 TXNRD1Q16881 649 aa18.77■□□□□ 0.6
LAMA5-207ENST00000471042 ADAMTS8Q9UP79 889 aa18.77■□□□□ 0.6
LAMA5-207ENST00000471042 TUBGCP6Q96RT7 1819 aa18.77■□□□□ 0.59
LAMA5-207ENST00000471042 MAPK8IP3Q9UPT6 1336 aa18.76■□□□□ 0.59
LAMA5-207ENST00000471042 PHKG2P15735 406 aa18.76■□□□□ 0.59
LAMA5-207ENST00000471042 ANO8Q9HCE9 1232 aaPredicted RBP18.76■□□□□ 0.59
LAMA5-207ENST00000471042 MTHFSDQ2M296 383 aaKnown RBP18.75■□□□□ 0.59
LAMA5-207ENST00000471042 GAS2L2Q8NHY3 880 aa18.75■□□□□ 0.59
LAMA5-207ENST00000471042 PHACTR3Q96KR7 559 aa18.75■□□□□ 0.59
LAMA5-207ENST00000471042 HSP90AB1P08238 724 aaKnown RBP18.74■□□□□ 0.59
LAMA5-207ENST00000471042 MIER1Q8N108 512 aa18.74■□□□□ 0.59
LAMA5-207ENST00000471042 TAF1LQ8IZX4 1826 aa18.73■□□□□ 0.59
LAMA5-207ENST00000471042 CCER2I3L3R5 266 aa18.73■□□□□ 0.59
LAMA5-207ENST00000471042 AKAP4Q5JQC9 854 aa18.73■□□□□ 0.59
LAMA5-207ENST00000471042 CCDC146Q8IYE0 955 aa18.73■□□□□ 0.59
LAMA5-207ENST00000471042 PNISRQ8TF01 805 aaKnown RBP18.73■□□□□ 0.59
LAMA5-207ENST00000471042 NKX1-1Q15270 411 aaPredicted RBP18.72■□□□□ 0.59
LAMA5-207ENST00000471042 SYTL4Q96C24 671 aaPredicted RBP18.72■□□□□ 0.59
LAMA5-207ENST00000471042 PLEKHF1Q96S99 279 aa18.72■□□□□ 0.59
LAMA5-207ENST00000471042 C5P01031 1676 aa18.71■□□□□ 0.59
LAMA5-207ENST00000471042 PRIM1P49642 420 aaKnown RBP18.71■□□□□ 0.59
LAMA5-207ENST00000471042 FAM9BQ8IZU0 186 aa18.71■□□□□ 0.59
LAMA5-207ENST00000471042 RUNDC1Q96C34 613 aa18.71■□□□□ 0.59
LAMA5-207ENST00000471042 DCAF5Q96JK2 942 aa18.71■□□□□ 0.59
LAMA5-207ENST00000471042 VIRMAQ69YN4 1812 aaKnown RBP18.7■□□□□ 0.58
LAMA5-207ENST00000471042 MPRIPQ6WCQ1 1025 aa18.7■□□□□ 0.58
LAMA5-207ENST00000471042 GNAT3A8MTJ3 354 aa18.69■□□□□ 0.58
LAMA5-207ENST00000471042 STK32BQ9NY57 414 aa18.69■□□□□ 0.58
LAMA5-207ENST00000471042 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
LAMA5-207ENST00000471042 SLC15A2Q16348 729 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 1085.7 ms