RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 SOS2Q07890 1332 aaPredicted RBP7.73□□□□□ -1.17
HDAC8-216ENST00000470998 GOLGA8CPA6NN73 597 aa7.72□□□□□ -1.17
HDAC8-216ENST00000470998 RGL3Q3MIN7 710 aa7.72□□□□□ -1.17
HDAC8-216ENST00000470998 SLC4A5Q9BY07 1137 aa7.72□□□□□ -1.17
HDAC8-216ENST00000470998 PLSCR2Q9NRY7 297 aa7.72□□□□□ -1.17
HDAC8-216ENST00000470998 VPS9D1Q9Y2B5 631 aa7.72□□□□□ -1.17
HDAC8-216ENST00000470998 MYOM2P54296 1465 aa7.72□□□□□ -1.17
HDAC8-216ENST00000470998 SHPRHQ149N8 1683 aa7.72□□□□□ -1.17
HDAC8-216ENST00000470998 EIF3AQ14152 1382 aaKnown RBP7.71□□□□□ -1.17
HDAC8-216ENST00000470998 PNPLA6Q8IY17 1366 aa7.71□□□□□ -1.17
HDAC8-216ENST00000470998 LRP6O75581 1613 aa7.71□□□□□ -1.17
HDAC8-216ENST00000470998 PIK3C2GO75747 1445 aa7.71□□□□□ -1.17
HDAC8-216ENST00000470998 PRIM1P49642 420 aaKnown RBP7.71□□□□□ -1.18
HDAC8-216ENST00000470998 PROX2Q3B8N5 592 aa7.71□□□□□ -1.18
HDAC8-216ENST00000470998 RBM26Q5T8P6 1007 aaKnown RBP7.71□□□□□ -1.18
HDAC8-216ENST00000470998 GPIHBP1Q8IV16 184 aa7.71□□□□□ -1.18
HDAC8-216ENST00000470998 DCAF11Q8TEB1 546 aa7.71□□□□□ -1.18
HDAC8-216ENST00000470998 PRKRIP1Q9H875 184 aaPredicted RBP7.71□□□□□ -1.18
HDAC8-216ENST00000470998 C14orf93Q9H972 538 aaKnown RBP7.71□□□□□ -1.18
HDAC8-216ENST00000470998 NPHP3Q7Z494 1330 aa7.71□□□□□ -1.18
HDAC8-216ENST00000470998 PPLO60437 1756 aa7.71□□□□□ -1.18
HDAC8-216ENST00000470998 TRPM1Q7Z4N2 1603 aa7.7□□□□□ -1.18
HDAC8-216ENST00000470998 SETD1AO15047 1707 aaKnown RBP7.7□□□□□ -1.18
HDAC8-216ENST00000470998 FCHSD2O94868 740 aa7.7□□□□□ -1.18
HDAC8-216ENST00000470998 RXRBP28702 533 aa7.7□□□□□ -1.18
HDAC8-216ENST00000470998 CDCA8Q53HL2 280 aa7.7□□□□□ -1.18
HDAC8-216ENST00000470998 PACS2Q86VP3 889 aa7.7□□□□□ -1.18
HDAC8-216ENST00000470998 SPNS2Q8IVW8 549 aa7.7□□□□□ -1.18
HDAC8-216ENST00000470998 MRPL50Q8N5N7 158 aaKnown RBP7.7□□□□□ -1.18
HDAC8-216ENST00000470998 ORAI2Q96SN7 254 aa7.7□□□□□ -1.18
HDAC8-216ENST00000470998 HIRIP3Q9BW71 556 aaPredicted RBP7.7□□□□□ -1.18
HDAC8-216ENST00000470998 CDC42BPGQ6DT37 1551 aa7.7□□□□□ -1.18
HDAC8-216ENST00000470998 NHSL1Q5SYE7 1610 aa7.7□□□□□ -1.18
HDAC8-216ENST00000470998 CDK12Q9NYV4 1490 aaPredicted RBP7.69□□□□□ -1.18
HDAC8-216ENST00000470998 NRXN1Q9ULB1 1477 aa7.69□□□□□ -1.18
HDAC8-216ENST00000470998 NUTM2BA6NNL0 878 aaPredicted RBP7.69□□□□□ -1.18
HDAC8-216ENST00000470998 NUTM2EB1AL46 878 aaPredicted RBP7.69□□□□□ -1.18
HDAC8-216ENST00000470998 TRIM6-TRIM34B2RNG4 842 aa7.69□□□□□ -1.18
HDAC8-216ENST00000470998 ESCO1Q5FWF5 840 aa7.69□□□□□ -1.18
HDAC8-216ENST00000470998 NUTM2AQ8IVF1 878 aaPredicted RBP7.69□□□□□ -1.18
HDAC8-216ENST00000470998 CDCA7LQ96GN5 454 aa7.69□□□□□ -1.18
HDAC8-216ENST00000470998 RABGEF1Q9UJ41 708 aa7.69□□□□□ -1.18
HDAC8-216ENST00000470998 INSRP06213 1382 aa7.69□□□□□ -1.18
HDAC8-216ENST00000470998 NALCNQ8IZF0 1738 aa7.69□□□□□ -1.18
HDAC8-216ENST00000470998 YTHDC2Q9H6S0 1430 aaKnown RBP7.69□□□□□ -1.18
HDAC8-216ENST00000470998 NBPF26B4DH59 902 aa7.68□□□□□ -1.18
HDAC8-216ENST00000470998 PRSS12P56730 875 aa7.68□□□□□ -1.18
HDAC8-216ENST00000470998 RALBP1Q15311 655 aa7.68□□□□□ -1.18
HDAC8-216ENST00000470998 WAPLQ7Z5K2 1190 aa7.68□□□□□ -1.18
HDAC8-216ENST00000470998 DDX17Q92841 729 aaKnown RBP7.68□□□□□ -1.18
HDAC8-216ENST00000470998 STK26Q9P289 416 aa7.68□□□□□ -1.18
HDAC8-216ENST00000470998 RBM27Q9P2N5 1060 aaKnown RBP7.68□□□□□ -1.18
HDAC8-216ENST00000470998 AFF2P51816 1311 aa7.68□□□□□ -1.18
HDAC8-216ENST00000470998 ONECUT3O60422 494 aaPredicted RBP7.67□□□□□ -1.18
HDAC8-216ENST00000470998 RBM6P78332 1123 aaKnown RBP7.67□□□□□ -1.18
HDAC8-216ENST00000470998 PTGDRQ13258 359 aa7.67□□□□□ -1.18
HDAC8-216ENST00000470998 TMEM132EQ6IEE7 984 aa7.67□□□□□ -1.18
HDAC8-216ENST00000470998 NGLY1Q96IV0 654 aa7.67□□□□□ -1.18
HDAC8-216ENST00000470998 KIAA1468Q9P260 1216 aa7.67□□□□□ -1.18
HDAC8-216ENST00000470998 SBNO2Q9Y2G9 1366 aa7.67□□□□□ -1.18
HDAC8-216ENST00000470998 KNDC1Q76NI1 1749 aa7.66□□□□□ -1.18
HDAC8-216ENST00000470998 KIAA1210Q9ULL0 1709 aa7.66□□□□□ -1.18
HDAC8-216ENST00000470998 FOXO3O43524 673 aa7.66□□□□□ -1.18
HDAC8-216ENST00000470998 NEFLP07196 543 aa7.66□□□□□ -1.18
HDAC8-216ENST00000470998 TMF1P82094 1093 aa7.66□□□□□ -1.18
HDAC8-216ENST00000470998 CFAP70Q5T0N1 1121 aa7.66□□□□□ -1.18
HDAC8-216ENST00000470998 ERICH6BQ5W0A0 696 aa7.66□□□□□ -1.18
HDAC8-216ENST00000470998 LMOD2Q6P5Q4 547 aa7.66□□□□□ -1.18
HDAC8-216ENST00000470998 PADI6Q6TGC4 694 aa7.66□□□□□ -1.18
HDAC8-216ENST00000470998 FNBP4Q8N3X1 1017 aaPredicted RBP7.66□□□□□ -1.18
HDAC8-216ENST00000470998 RNF166Q96A37 237 aaPredicted RBP7.66□□□□□ -1.18
HDAC8-216ENST00000470998 C8orf37Q96NL8 207 aa7.66□□□□□ -1.18
HDAC8-216ENST00000470998 QTRT2Q9H974 415 aaKnown RBP7.66□□□□□ -1.18
HDAC8-216ENST00000470998 TRPC5Q9UL62 973 aaPredicted RBP7.66□□□□□ -1.18
HDAC8-216ENST00000470998 BRD4O60885 1362 aaPredicted RBP7.66□□□□□ -1.18
HDAC8-216ENST00000470998 DLC1Q96QB1 1528 aa7.66□□□□□ -1.18
HDAC8-216ENST00000470998 IFT172Q9UG01 1749 aa7.66□□□□□ -1.18
HDAC8-216ENST00000470998 ST20-MTHFSA0A0A6YYL1 179 aa7.65□□□□□ -1.18
HDAC8-216ENST00000470998 C11orf95C9JLR9 678 aaPredicted RBP7.65□□□□□ -1.18
HDAC8-216ENST00000470998 HRO43593 1189 aa7.65□□□□□ -1.18
HDAC8-216ENST00000470998 PSME1Q06323 249 aa7.65□□□□□ -1.18
HDAC8-216ENST00000470998 HIC1Q14526 733 aa7.65□□□□□ -1.18
HDAC8-216ENST00000470998 ZBED9Q6R2W3 1325 aa7.65□□□□□ -1.18
HDAC8-216ENST00000470998 PLEKHH1Q9ULM0 1364 aa7.65□□□□□ -1.18
HDAC8-216ENST00000470998 PXDNQ92626 1479 aa7.64□□□□□ -1.19
HDAC8-216ENST00000470998 ANKARQ7Z5J8 1434 aa7.64□□□□□ -1.19
HDAC8-216ENST00000470998 ADAMTS2O95450 1211 aa7.64□□□□□ -1.19
HDAC8-216ENST00000470998 PRAM1Q96QH2 718 aa7.64□□□□□ -1.19
HDAC8-216ENST00000470998 MRS2Q9HD23 443 aa7.64□□□□□ -1.19
HDAC8-216ENST00000470998 POGKQ9P215 609 aa7.64□□□□□ -1.19
HDAC8-216ENST00000470998 SEPT9Q9UHD8 586 aaPredicted RBP7.64□□□□□ -1.19
HDAC8-216ENST00000470998 TSKSQ9UJT2 592 aa7.64□□□□□ -1.19
HDAC8-216ENST00000470998 USP21Q9UK80 565 aa7.64□□□□□ -1.19
HDAC8-216ENST00000470998 PNMA3Q9UL41 463 aa7.64□□□□□ -1.19
HDAC8-216ENST00000470998 SBNO1A3KN83 1393 aa7.63□□□□□ -1.19
HDAC8-216ENST00000470998 NPC1L1Q9UHC9 1359 aa7.63□□□□□ -1.19
HDAC8-216ENST00000470998 SPATA31A3Q5VYP0 1347 aa7.63□□□□□ -1.19
HDAC8-216ENST00000470998 MYBBP1AQ9BQG0 1328 aaKnown RBP7.63□□□□□ -1.19
HDAC8-216ENST00000470998 MMRN1Q13201 1228 aa7.63□□□□□ -1.19
HDAC8-216ENST00000470998 KRT28Q7Z3Y7 464 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms