RNA–Protein interactions for RNA: ENST00000470263.5

LINC02008-201, Transcript of long intergenic non-protein coding RNA 2008, humanhuman

TSL 1 (best) BASIC

Gene LINC02008, Length 1,951 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02008-201ENST00000470263 USHBP1Q8N6Y0 703 aa8.66□□□□□ -1.02
LINC02008-201ENST00000470263 RNF39Q9H2S5 420 aa8.66□□□□□ -1.02
LINC02008-201ENST00000470263 KAT6BQ8WYB5 2073 aa8.65□□□□□ -1.02
LINC02008-201ENST00000470263 AMER1Q5JTC6 1135 aaPredicted RBP8.65□□□□□ -1.02
LINC02008-201ENST00000470263 ZNF316A6NFI3 1004 aaPredicted RBP8.64□□□□□ -1.03
LINC02008-201ENST00000470263 EZH2Q15910 746 aaKnown RBP8.64□□□□□ -1.03
LINC02008-201ENST00000470263 SBF2Q86WG5 1849 aa8.64□□□□□ -1.03
LINC02008-201ENST00000470263 BCL9O00512 1426 aa8.64□□□□□ -1.03
LINC02008-201ENST00000470263 PER1O15534 1290 aaPredicted RBP8.64□□□□□ -1.03
LINC02008-201ENST00000470263 PTF1AQ7RTS3 328 aa8.64□□□□□ -1.03
LINC02008-201ENST00000470263 DDX54Q8TDD1 881 aaKnown RBP8.64□□□□□ -1.03
LINC02008-201ENST00000470263 RAPGEF4Q8WZA2 1011 aa8.64□□□□□ -1.03
LINC02008-201ENST00000470263 CAMKK2Q96RR4 588 aa8.64□□□□□ -1.03
LINC02008-201ENST00000470263 BCL11BQ9C0K0 894 aaPredicted RBP8.64□□□□□ -1.03
LINC02008-201ENST00000470263 MEGF6O75095 1541 aa8.64□□□□□ -1.03
LINC02008-201ENST00000470263 CC2D1BQ5T0F9 858 aaKnown RBP8.62□□□□□ -1.03
LINC02008-201ENST00000470263 ZCRB1Q8TBF4 217 aaKnown RBP8.62□□□□□ -1.03
LINC02008-201ENST00000470263 ACSBG1Q96GR2 724 aa8.62□□□□□ -1.03
LINC02008-201ENST00000470263 PARD3Q8TEW0 1356 aa8.62□□□□□ -1.03
LINC02008-201ENST00000470263 KCNQ2O43526 872 aa8.62□□□□□ -1.03
LINC02008-201ENST00000470263 TATP17735 454 aaPredicted RBP8.62□□□□□ -1.03
LINC02008-201ENST00000470263 CNGB1Q14028 1251 aaPredicted RBP8.62□□□□□ -1.03
LINC02008-201ENST00000470263 EIF4A2Q14240 407 aaKnown RBP8.62□□□□□ -1.03
LINC02008-201ENST00000470263 EYA1Q99502 592 aa8.62□□□□□ -1.03
LINC02008-201ENST00000470263 GTF3C3Q9Y5Q9 886 aa8.61□□□□□ -1.03
LINC02008-201ENST00000470263 PLSCR1O15162 318 aa8.61□□□□□ -1.03
LINC02008-201ENST00000470263 PSDA5PKW4 1024 aaPredicted RBP8.6□□□□□ -1.03
LINC02008-201ENST00000470263 SHANK3Q9BYB0 1731 aa8.6□□□□□ -1.03
LINC02008-201ENST00000470263 NCAPD2Q15021 1401 aa8.59□□□□□ -1.03
LINC02008-201ENST00000470263 NHSQ6T4R5 1651 aa8.59□□□□□ -1.03
LINC02008-201ENST00000470263 SYTL4Q96C24 671 aaPredicted RBP8.59□□□□□ -1.03
LINC02008-201ENST00000470263 PCDH11XQ9BZA7 1347 aa8.59□□□□□ -1.03
LINC02008-201ENST00000470263 PCDH11YQ9BZA8 1340 aa8.59□□□□□ -1.03
LINC02008-201ENST00000470263 NPC1L1Q9UHC9 1359 aa8.59□□□□□ -1.03
LINC02008-201ENST00000470263 RREB1Q92766 1687 aa8.59□□□□□ -1.03
LINC02008-201ENST00000470263 MTHFSP49914 203 aa8.59□□□□□ -1.03
LINC02008-201ENST00000470263 CACNB1Q02641 598 aaPredicted RBP8.59□□□□□ -1.03
LINC02008-201ENST00000470263 R3HDM1Q15032 1099 aaKnown RBP8.59□□□□□ -1.03
LINC02008-201ENST00000470263 IGSF1Q8N6C5 1336 aa8.59□□□□□ -1.04
LINC02008-201ENST00000470263 RGPD3A6NKT7 1758 aaPredicted RBP8.58□□□□□ -1.04
LINC02008-201ENST00000470263 RGPD4Q7Z3J3 1758 aa8.58□□□□□ -1.04
LINC02008-201ENST00000470263 PRIM1P49642 420 aaKnown RBP8.58□□□□□ -1.04
LINC02008-201ENST00000470263 NBPF14Q5TI25 921 aa8.58□□□□□ -1.04
LINC02008-201ENST00000470263 PROM2Q8N271 834 aa8.58□□□□□ -1.04
LINC02008-201ENST00000470263 NUP188Q5SRE5 1749 aa8.58□□□□□ -1.04
LINC02008-201ENST00000470263 BTAF1O14981 1849 aa8.57□□□□□ -1.04
LINC02008-201ENST00000470263 CYP27B1O15528 508 aa8.57□□□□□ -1.04
LINC02008-201ENST00000470263 TXNRD1Q16881 649 aa8.57□□□□□ -1.04
LINC02008-201ENST00000470263 SPG7Q9UQ90 795 aa8.57□□□□□ -1.04
LINC02008-201ENST00000470263 DOT1LQ8TEK3 1739 aa8.57□□□□□ -1.04
LINC02008-201ENST00000470263 IL13P35225 146 aa8.57□□□□□ -1.04
LINC02008-201ENST00000470263 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.57□□□□□ -1.04
LINC02008-201ENST00000470263 PKD1L3Q7Z443 1732 aa8.57□□□□□ -1.04
LINC02008-201ENST00000470263 AEBP1Q8IUX7 1158 aa8.56□□□□□ -1.04
LINC02008-201ENST00000470263 SLC4A2P04920 1241 aa8.55□□□□□ -1.04
LINC02008-201ENST00000470263 SULT6B1Q6IMI4 303 aa8.55□□□□□ -1.04
LINC02008-201ENST00000470263 DIAPH1O60610 1272 aaKnown RBP8.55□□□□□ -1.04
LINC02008-201ENST00000470263 MPRIPQ6WCQ1 1025 aa8.55□□□□□ -1.04
LINC02008-201ENST00000470263 IFNL2Q8IZJ0 200 aa8.55□□□□□ -1.04
LINC02008-201ENST00000470263 ANO8Q9HCE9 1232 aaPredicted RBP8.55□□□□□ -1.04
LINC02008-201ENST00000470263 PLEKHG2Q9H7P9 1386 aa8.54□□□□□ -1.04
LINC02008-201ENST00000470263 PHKG2P15735 406 aa8.54□□□□□ -1.04
LINC02008-201ENST00000470263 NKX1-1Q15270 411 aaPredicted RBP8.54□□□□□ -1.04
LINC02008-201ENST00000470263 KDRP35968 1356 aa8.54□□□□□ -1.04
LINC02008-201ENST00000470263 C1QBPQ07021 282 aaKnown RBP8.53□□□□□ -1.04
LINC02008-201ENST00000470263 PLEKHO1Q53GL0 409 aaPredicted RBP8.53□□□□□ -1.04
LINC02008-201ENST00000470263 HMOX1P09601 288 aa8.53□□□□□ -1.04
LINC02008-201ENST00000470263 AMOTQ4VCS5 1084 aa8.53□□□□□ -1.04
LINC02008-201ENST00000470263 SLC27A3Q5K4L6 730 aa8.53□□□□□ -1.04
LINC02008-201ENST00000470263 LRRC4BQ9NT99 713 aa8.53□□□□□ -1.04
LINC02008-201ENST00000470263 STK32BQ9NY57 414 aa8.53□□□□□ -1.04
LINC02008-201ENST00000470263 TOGARAM1Q9Y4F4 1720 aa8.53□□□□□ -1.04
LINC02008-201ENST00000470263 KCNQ4P56696 695 aa8.52□□□□□ -1.05
LINC02008-201ENST00000470263 SLC15A2Q16348 729 aa8.52□□□□□ -1.05
LINC02008-201ENST00000470263 ZNF530Q6P9A1 599 aaPredicted RBP8.52□□□□□ -1.05
LINC02008-201ENST00000470263 ITGB4P16144 1822 aa8.52□□□□□ -1.05
LINC02008-201ENST00000470263 COL3A1P02461 1466 aaPredicted RBP8.52□□□□□ -1.05
LINC02008-201ENST00000470263 U2SURPO15042 1029 aaKnown RBP8.52□□□□□ -1.05
LINC02008-201ENST00000470263 HSP90AB1P08238 724 aaKnown RBP8.52□□□□□ -1.05
LINC02008-201ENST00000470263 PPP2R1AP30153 589 aa8.52□□□□□ -1.05
LINC02008-201ENST00000470263 DDX10Q13206 875 aaKnown RBP8.52□□□□□ -1.05
LINC02008-201ENST00000470263 C1orf141Q5JVX7 400 aa8.52□□□□□ -1.05
LINC02008-201ENST00000470263 PIGBQ92521 554 aa8.52□□□□□ -1.05
LINC02008-201ENST00000470263 CFAP53Q96M91 514 aa8.52□□□□□ -1.05
LINC02008-201ENST00000470263 TMOD3Q9NYL9 352 aa8.52□□□□□ -1.05
LINC02008-201ENST00000470263 CCNL1Q9UK58 526 aaPredicted RBP8.52□□□□□ -1.05
LINC02008-201ENST00000470263 LY75O60449 1722 aa8.51□□□□□ -1.05
LINC02008-201ENST00000470263 PALLDQ8WX93 1383 aa8.51□□□□□ -1.05
LINC02008-201ENST00000470263 DCAF5Q96JK2 942 aa8.5□□□□□ -1.05
LINC02008-201ENST00000470263 YTHDC1Q96MU7 727 aaKnown RBP8.5□□□□□ -1.05
LINC02008-201ENST00000470263 PDGFDQ9GZP0 370 aaPredicted RBP8.5□□□□□ -1.05
LINC02008-201ENST00000470263 U3KPZ7 1027 aaPredicted RBP8.5□□□□□ -1.05
LINC02008-201ENST00000470263 LRP5O75197 1615 aa8.5□□□□□ -1.05
LINC02008-201ENST00000470263 PAPPAQ13219 1627 aa8.5□□□□□ -1.05
LINC02008-201ENST00000470263 ZNF827Q17R98 1081 aa8.5□□□□□ -1.05
LINC02008-201ENST00000470263 SMARCC1Q92922 1105 aaPredicted RBP8.5□□□□□ -1.05
LINC02008-201ENST00000470263 UTRNP46939 3433 aa8.49□□□□□ -1.05
LINC02008-201ENST00000470263 KDM6AO15550 1401 aaPredicted RBP8.49□□□□□ -1.05
LINC02008-201ENST00000470263 ERVV-2B6SEH9 535 aa8.49□□□□□ -1.05
LINC02008-201ENST00000470263 NUDCQ9Y266 331 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms