RNA–Protein interactions for RNA: ENST00000470180.2

C1orf43-207, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 5

Gene C1orf43, Length 1,861 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-207ENST00000470180 COG6Q9Y2V7 657 aa21.84■■□□□ 1.09
C1orf43-207ENST00000470180 HTATSF1O43719 755 aaKnown RBP21.83■■□□□ 1.08
C1orf43-207ENST00000470180 ZKSCAN2Q63HK3 967 aa21.83■■□□□ 1.08
C1orf43-207ENST00000470180 CABLES1Q8TDN4 633 aa21.83■■□□□ 1.08
C1orf43-207ENST00000470180 ANKRD24Q8TF21 1146 aa21.83■■□□□ 1.08
C1orf43-207ENST00000470180 CRYBG1Q9Y4K1 1723 aa21.82■■□□□ 1.08
C1orf43-207ENST00000470180 NCAPD2Q15021 1401 aa21.82■■□□□ 1.08
C1orf43-207ENST00000470180 BRPF1P55201 1214 aaPredicted RBP21.81■■□□□ 1.08
C1orf43-207ENST00000470180 RTF1Q92541 710 aaKnown RBP21.81■■□□□ 1.08
C1orf43-207ENST00000470180 GNAT3A8MTJ3 354 aa21.81■■□□□ 1.08
C1orf43-207ENST00000470180 ELL2O00472 640 aaPredicted RBP21.81■■□□□ 1.08
C1orf43-207ENST00000470180 CLUAP1Q96AJ1 413 aa21.81■■□□□ 1.08
C1orf43-207ENST00000470180 NOB1Q9ULX3 412 aaKnown RBP21.81■■□□□ 1.08
C1orf43-207ENST00000470180 SOS2Q07890 1332 aaPredicted RBP21.8■■□□□ 1.08
C1orf43-207ENST00000470180 TWISTNBQ3B726 338 aaPredicted RBP21.8■■□□□ 1.08
C1orf43-207ENST00000470180 COL18A1P39060 1754 aa21.8■■□□□ 1.08
C1orf43-207ENST00000470180 KDM2BQ8NHM5 1336 aa21.79■■□□□ 1.08
C1orf43-207ENST00000470180 TRIM27P14373 513 aa21.79■■□□□ 1.08
C1orf43-207ENST00000470180 CAMTA1Q9Y6Y1 1673 aa21.78■■□□□ 1.08
C1orf43-207ENST00000470180 ATF7IPQ6VMQ6 1270 aa21.78■■□□□ 1.08
C1orf43-207ENST00000470180 DZIP1LQ8IYY4 767 aaKnown RBP21.78■■□□□ 1.08
C1orf43-207ENST00000470180 IL17REQ8NFR9 667 aa21.78■■□□□ 1.08
C1orf43-207ENST00000470180 MRPL50Q8N5N7 158 aaKnown RBP21.77■■□□□ 1.08
C1orf43-207ENST00000470180 MAP3K5Q99683 1374 aa21.77■■□□□ 1.08
C1orf43-207ENST00000470180 LRRC37A3O60309 1634 aa21.77■■□□□ 1.08
C1orf43-207ENST00000470180 MIS18AQ9NYP9 233 aa21.77■■□□□ 1.08
C1orf43-207ENST00000470180 KRT24Q2M2I5 525 aa21.76■■□□□ 1.07
C1orf43-207ENST00000470180 ERBB3P21860 1342 aa21.76■■□□□ 1.07
C1orf43-207ENST00000470180 KIF16BQ96L93 1317 aa21.76■■□□□ 1.07
C1orf43-207ENST00000470180 KIAA0232Q92628 1395 aa21.75■■□□□ 1.07
C1orf43-207ENST00000470180 MS4A1P11836 297 aa21.75■■□□□ 1.07
C1orf43-207ENST00000470180 MVPQ14764 893 aaKnown RBP21.75■■□□□ 1.07
C1orf43-207ENST00000470180 LMO7Q8WWI1 1683 aa21.74■■□□□ 1.07
C1orf43-207ENST00000470180 IPO8O15397 1037 aaKnown RBP21.74■■□□□ 1.07
C1orf43-207ENST00000470180 TCERG1O14776 1098 aaKnown RBP21.73■■□□□ 1.07
C1orf43-207ENST00000470180 CPDO75976 1380 aa21.73■■□□□ 1.07
C1orf43-207ENST00000470180 CHRNA2Q15822 529 aa21.73■■□□□ 1.07
C1orf43-207ENST00000470180 CENPQQ7L2Z9 268 aaPredicted RBP21.73■■□□□ 1.07
C1orf43-207ENST00000470180 FTSJ3Q8IY81 847 aaKnown RBP21.73■■□□□ 1.07
C1orf43-207ENST00000470180 AAMPQ13685 434 aa21.72■■□□□ 1.07
C1orf43-207ENST00000470180 TSPYL4Q9UJ04 414 aa21.72■■□□□ 1.07
C1orf43-207ENST00000470180 PLEKHO1Q53GL0 409 aaPredicted RBP21.71■■□□□ 1.07
C1orf43-207ENST00000470180 NHSL1Q5SYE7 1610 aa21.71■■□□□ 1.07
C1orf43-207ENST00000470180 ARHGAP45Q92619 1136 aa21.71■■□□□ 1.07
C1orf43-207ENST00000470180 IGHDP01880 384 aa21.7■■□□□ 1.06
C1orf43-207ENST00000470180 AMOTQ4VCS5 1084 aa21.7■■□□□ 1.06
C1orf43-207ENST00000470180 CEMIPQ8WUJ3 1361 aa21.7■■□□□ 1.06
C1orf43-207ENST00000470180 ABCC6O95255 1503 aa21.69■■□□□ 1.06
C1orf43-207ENST00000470180 TMEM57Q8N5G2 664 aa21.69■■□□□ 1.06
C1orf43-207ENST00000470180 LGR6Q9HBX8 967 aa21.69■■□□□ 1.06
C1orf43-207ENST00000470180 TAF7Q15545 349 aaPredicted RBP21.69■■□□□ 1.06
C1orf43-207ENST00000470180 PCDHB15Q9Y5E8 787 aa21.69■■□□□ 1.06
C1orf43-207ENST00000470180 AKAP4Q5JQC9 854 aa21.68■■□□□ 1.06
C1orf43-207ENST00000470180 ZNF530Q6P9A1 599 aaPredicted RBP21.68■■□□□ 1.06
C1orf43-207ENST00000470180 FAM208AQ9UK61 1670 aaKnown RBP21.67■■□□□ 1.06
C1orf43-207ENST00000470180 BABAM1Q9NWV8 329 aa21.67■■□□□ 1.06
C1orf43-207ENST00000470180 NLRP2Q9NX02 1062 aa21.67■■□□□ 1.06
C1orf43-207ENST00000470180 SKAP1Q86WV1 359 aa21.66■■□□□ 1.06
C1orf43-207ENST00000470180 HAP1P54257 671 aaPredicted RBP21.66■■□□□ 1.06
C1orf43-207ENST00000470180 DDX19BQ9UMR2 479 aa21.66■■□□□ 1.06
C1orf43-207ENST00000470180 LTBP4Q8N2S1 1624 aa21.66■■□□□ 1.06
C1orf43-207ENST00000470180 ITPRIPQ8IWB1 547 aa21.65■■□□□ 1.06
C1orf43-207ENST00000470180 RBM19Q9Y4C8 960 aaKnown RBP21.65■■□□□ 1.06
C1orf43-207ENST00000470180 VIRMAQ69YN4 1812 aaKnown RBP21.64■■□□□ 1.05
C1orf43-207ENST00000470180 ABCA3Q99758 1704 aa21.64■■□□□ 1.05
C1orf43-207ENST00000470180 MPRIPQ6WCQ1 1025 aa21.63■■□□□ 1.05
C1orf43-207ENST00000470180 CSB-PGBD3P0DP91 1061 aa21.62■■□□□ 1.05
C1orf43-207ENST00000470180 RNMTO43148 476 aaKnown RBP21.62■■□□□ 1.05
C1orf43-207ENST00000470180 ZBTB40Q9NUA8 1239 aa21.62■■□□□ 1.05
C1orf43-207ENST00000470180 ABCC4O15439 1325 aa21.61■■□□□ 1.05
C1orf43-207ENST00000470180 C1orf141Q5JVX7 400 aa21.61■■□□□ 1.05
C1orf43-207ENST00000470180 PRDM11Q9NQV5 511 aa21.61■■□□□ 1.05
C1orf43-207ENST00000470180 RAPGEF4Q8WZA2 1011 aa21.6■■□□□ 1.05
C1orf43-207ENST00000470180 API5Q9BZZ5 524 aaKnown RBP21.6■■□□□ 1.05
C1orf43-207ENST00000470180 MEGF6O75095 1541 aa21.59■■□□□ 1.05
C1orf43-207ENST00000470180 ZBTB7BO15156 539 aaPredicted RBP21.58■■□□□ 1.05
C1orf43-207ENST00000470180 TATP17735 454 aaPredicted RBP21.58■■□□□ 1.05
C1orf43-207ENST00000470180 KDM3BQ7LBC6 1761 aa21.58■■□□□ 1.05
C1orf43-207ENST00000470180 ADAMTS7Q9UKP4 1686 aa21.58■■□□□ 1.05
C1orf43-207ENST00000470180 ROBO1Q9Y6N7 1651 aa21.58■■□□□ 1.05
C1orf43-207ENST00000470180 SLC4A2P04920 1241 aa21.58■■□□□ 1.04
C1orf43-207ENST00000470180 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.58■■□□□ 1.042e-6■■■■□ 24.3
C1orf43-207ENST00000470180 OVOS2A0A0G2JMS6 1433 aa21.57■■□□□ 1.04
C1orf43-207ENST00000470180 RGS12O14924 1447 aa21.57■■□□□ 1.04
C1orf43-207ENST00000470180 SOS1Q07889 1333 aaPredicted RBP21.57■■□□□ 1.04
C1orf43-207ENST00000470180 TEFQ10587 303 aa21.56■■□□□ 1.04
C1orf43-207ENST00000470180 KCNQ3O43525 872 aa21.56■■□□□ 1.04
C1orf43-207ENST00000470180 EIF4A1P60842 406 aaKnown RBP21.56■■□□□ 1.04
C1orf43-207ENST00000470180 WDR17Q8IZU2 1322 aa21.55■■□□□ 1.04
C1orf43-207ENST00000470180 G2E3Q7L622 706 aa21.55■■□□□ 1.04
C1orf43-207ENST00000470180 RWDD1Q9H446 243 aaPredicted RBP21.55■■□□□ 1.04
C1orf43-207ENST00000470180 PTPRCP08575 1304 aa21.55■■□□□ 1.04
C1orf43-207ENST00000470180 PLEKHG2Q9H7P9 1386 aa21.55■■□□□ 1.04
C1orf43-207ENST00000470180 SIPA1L3O60292 1781 aaPredicted RBP21.55■■□□□ 1.04
C1orf43-207ENST00000470180 COL5A2P05997 1499 aaPredicted RBP21.54■■□□□ 1.04
C1orf43-207ENST00000470180 SPG7Q9UQ90 795 aa21.54■■□□□ 1.04
C1orf43-207ENST00000470180 BTBD11A6QL63 1104 aa21.54■■□□□ 1.04
C1orf43-207ENST00000470180 PHKG2P15735 406 aa21.54■■□□□ 1.04
C1orf43-207ENST00000470180 INTS3Q68E01 1043 aaKnown RBP21.54■■□□□ 1.04
C1orf43-207ENST00000470180 CCDC30Q5VVM6 783 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms