RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 PDE3BQ13370 1112 aa30.54■■■□□ 2.48
SREBF1-208ENST00000469356 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.53■■■□□ 2.48
SREBF1-208ENST00000469356 SPG7Q9UQ90 795 aa30.53■■■□□ 2.48
SREBF1-208ENST00000469356 THSD7AQ9UPZ6 1657 aa30.53■■■□□ 2.48
SREBF1-208ENST00000469356 AMOTQ4VCS5 1084 aa30.52■■■□□ 2.48
SREBF1-208ENST00000469356 PLEKHO1Q53GL0 409 aaPredicted RBP30.52■■■□□ 2.48
SREBF1-208ENST00000469356 ZCRB1Q8TBF4 217 aaKnown RBP30.52■■■□□ 2.48
SREBF1-208ENST00000469356 AEBP1Q8IUX7 1158 aa30.51■■■□□ 2.48
SREBF1-208ENST00000469356 OVOS2A0A0G2JMS6 1433 aa30.5■■■□□ 2.47
SREBF1-208ENST00000469356 MEGF6O75095 1541 aa30.49■■■□□ 2.47
SREBF1-208ENST00000469356 RGS12O14924 1447 aa30.49■■■□□ 2.47
SREBF1-208ENST00000469356 MIER1Q8N108 512 aa30.48■■■□□ 2.47
SREBF1-208ENST00000469356 KRT27Q7Z3Y8 459 aa30.47■■■□□ 2.47
SREBF1-208ENST00000469356 TNS2Q63HR2 1409 aa30.47■■■□□ 2.47
SREBF1-208ENST00000469356 PRKAR2BP31323 418 aa30.47■■■□□ 2.47
SREBF1-208ENST00000469356 CCDC184Q52MB2 194 aa30.47■■■□□ 2.47
SREBF1-208ENST00000469356 RSPH6AQ9H0K4 717 aa30.47■■■□□ 2.47
SREBF1-208ENST00000469356 PCDH11XQ9BZA7 1347 aa30.45■■■□□ 2.46
SREBF1-208ENST00000469356 PCDH11YQ9BZA8 1340 aa30.45■■■□□ 2.46
SREBF1-208ENST00000469356 LRRC37A3O60309 1634 aa30.44■■■□□ 2.46
SREBF1-208ENST00000469356 PNISRQ8TF01 805 aaKnown RBP30.44■■■□□ 2.46
SREBF1-208ENST00000469356 ADAMTS8Q9UP79 889 aa30.43■■■□□ 2.46
SREBF1-208ENST00000469356 MAPK8IP3Q9UPT6 1336 aa30.43■■■□□ 2.46
SREBF1-208ENST00000469356 BRWD3Q6RI45 1802 aa30.42■■■□□ 2.46
SREBF1-208ENST00000469356 GAS2L2Q8NHY3 880 aa30.42■■■□□ 2.46
SREBF1-208ENST00000469356 DDX54Q8TDD1 881 aaKnown RBP30.42■■■□□ 2.46
SREBF1-208ENST00000469356 PKD1L3Q7Z443 1732 aa30.41■■■□□ 2.46
SREBF1-208ENST00000469356 C1orf141Q5JVX7 400 aa30.4■■■□□ 2.46
SREBF1-208ENST00000469356 IFNL2Q8IZJ0 200 aa30.4■■■□□ 2.46
SREBF1-208ENST00000469356 HSP90AB1P08238 724 aaKnown RBP30.38■■■□□ 2.45
SREBF1-208ENST00000469356 ZNF530Q6P9A1 599 aaPredicted RBP30.38■■■□□ 2.45
SREBF1-208ENST00000469356 RUNDC1Q96C34 613 aa30.37■■■□□ 2.45
SREBF1-208ENST00000469356 FAM196AQ6ZSG2 479 aa30.36■■■□□ 2.45
SREBF1-208ENST00000469356 FAM9BQ8IZU0 186 aa30.36■■■□□ 2.45
SREBF1-208ENST00000469356 MARCH10Q8NA82 808 aaPredicted RBP30.35■■■□□ 2.45
SREBF1-208ENST00000469356 AKAP4Q5JQC9 854 aa30.34■■■□□ 2.45
SREBF1-208ENST00000469356 PLEKHF1Q96S99 279 aa30.34■■■□□ 2.45
SREBF1-208ENST00000469356 PHKG2P15735 406 aa30.33■■■□□ 2.45
SREBF1-208ENST00000469356 MTHFSDQ2M296 383 aaKnown RBP30.33■■■□□ 2.45
SREBF1-208ENST00000469356 PHACTR3Q96KR7 559 aa30.32■■■□□ 2.44
SREBF1-208ENST00000469356 KAT6BQ8WYB5 2073 aa30.32■■■□□ 2.44
SREBF1-208ENST00000469356 CYP27B1O15528 508 aa30.31■■■□□ 2.44
SREBF1-208ENST00000469356 SHANK3Q9BYB0 1731 aa30.31■■■□□ 2.44
SREBF1-208ENST00000469356 CCDC146Q8IYE0 955 aa30.29■■■□□ 2.44
SREBF1-208ENST00000469356 BCL9O00512 1426 aa30.29■■■□□ 2.44
SREBF1-208ENST00000469356 NKX1-1Q15270 411 aaPredicted RBP30.28■■■□□ 2.44
SREBF1-208ENST00000469356 GNAT3A8MTJ3 354 aa30.27■■■□□ 2.44
SREBF1-208ENST00000469356 NFE2L2Q16236 605 aa30.27■■■□□ 2.44
SREBF1-208ENST00000469356 RTF1Q92541 710 aaKnown RBP30.27■■■□□ 2.44
SREBF1-208ENST00000469356 DCAF5Q96JK2 942 aa30.27■■■□□ 2.44
SREBF1-208ENST00000469356 HTATSF1O43719 755 aaKnown RBP30.25■■■□□ 2.43
SREBF1-208ENST00000469356 MAP3K5Q99683 1374 aa30.25■■■□□ 2.43
SREBF1-208ENST00000469356 LMOD3Q0VAK6 560 aa30.24■■■□□ 2.43
SREBF1-208ENST00000469356 FAM182BQ5T319 152 aa30.24■■■□□ 2.43
SREBF1-208ENST00000469356 TMPOP42166 694 aaKnown RBP30.22■■■□□ 2.43
SREBF1-208ENST00000469356 ERVV-2B6SEH9 535 aa30.21■■■□□ 2.43
SREBF1-208ENST00000469356 RIPK4P57078 832 aa30.21■■■□□ 2.43
SREBF1-208ENST00000469356 ILDR2Q71H61 639 aa30.21■■■□□ 2.43
SREBF1-208ENST00000469356 MPRIPQ6WCQ1 1025 aa30.2■■■□□ 2.42
SREBF1-208ENST00000469356 APAF1O14727 1248 aa30.19■■■□□ 2.42
SREBF1-208ENST00000469356 NGEFQ8N5V2 710 aa30.18■■■□□ 2.42
SREBF1-208ENST00000469356 RNMTO43148 476 aaKnown RBP30.17■■■□□ 2.42
SREBF1-208ENST00000469356 SF3B2Q13435 895 aaKnown RBP30.17■■■□□ 2.42
SREBF1-208ENST00000469356 CCDC125Q86Z20 511 aa30.17■■■□□ 2.42
SREBF1-208ENST00000469356 SYTL4Q96C24 671 aaPredicted RBP30.17■■■□□ 2.42
SREBF1-208ENST00000469356 ACSBG1Q96GR2 724 aa30.17■■■□□ 2.42
SREBF1-208ENST00000469356 DLG5Q8TDM6 1919 aa30.17■■■□□ 2.42
SREBF1-208ENST00000469356 SBF2Q86WG5 1849 aa30.16■■■□□ 2.42
SREBF1-208ENST00000469356 CABP4P57796 275 aa30.16■■■□□ 2.42
SREBF1-208ENST00000469356 NEUROD2Q15784 382 aa30.16■■■□□ 2.42
SREBF1-208ENST00000469356 NCBP3Q53F19 620 aaKnown RBP30.16■■■□□ 2.42
SREBF1-208ENST00000469356 BCL11BQ9C0K0 894 aaPredicted RBP30.16■■■□□ 2.42
SREBF1-208ENST00000469356 SCN11AQ9UI33 1791 aa30.15■■■□□ 2.42
SREBF1-208ENST00000469356 PRIM1P49642 420 aaKnown RBP30.15■■■□□ 2.42
SREBF1-208ENST00000469356 TEFQ10587 303 aa30.15■■■□□ 2.42
SREBF1-208ENST00000469356 TRIM37O94972 964 aa30.14■■■□□ 2.42
SREBF1-208ENST00000469356 TMOD3Q9NYL9 352 aa30.14■■■□□ 2.42
SREBF1-208ENST00000469356 VIRMAQ69YN4 1812 aaKnown RBP30.14■■■□□ 2.42
SREBF1-208ENST00000469356 DOT1LQ8TEK3 1739 aa30.14■■■□□ 2.41
SREBF1-208ENST00000469356 RRP7AQ9Y3A4 280 aaKnown RBP30.13■■■□□ 2.41
SREBF1-208ENST00000469356 LGR6Q9HBX8 967 aa30.12■■■□□ 2.41
SREBF1-208ENST00000469356 KDM6AO15550 1401 aaPredicted RBP30.12■■■□□ 2.41
SREBF1-208ENST00000469356 NHSQ6T4R5 1651 aa30.11■■■□□ 2.41
SREBF1-208ENST00000469356 IL17REQ8NFR9 667 aa30.11■■■□□ 2.41
SREBF1-208ENST00000469356 ITGB4P16144 1822 aa30.1■■■□□ 2.41
SREBF1-208ENST00000469356 CALD1Q05682 793 aaKnown RBP30.09■■■□□ 2.41
SREBF1-208ENST00000469356 SLC52A2Q9HAB3 445 aa30.09■■■□□ 2.41
SREBF1-208ENST00000469356 ADAMTS7Q9UKP4 1686 aa30.08■■■□□ 2.41
SREBF1-208ENST00000469356 MCM10Q7L590 875 aa30.08■■■□□ 2.41
SREBF1-208ENST00000469356 CEMIPQ8WUJ3 1361 aa30.08■■■□□ 2.41
SREBF1-208ENST00000469356 KCNQ2O43526 872 aa30.07■■■□□ 2.4
SREBF1-208ENST00000469356 CCDC27Q2M243 656 aa30.07■■■□□ 2.4
SREBF1-208ENST00000469356 TOGARAM1Q9Y4F4 1720 aa30.06■■■□□ 2.4
SREBF1-208ENST00000469356 NFATC2IPQ8NCF5 419 aa30.06■■■□□ 2.4
SREBF1-208ENST00000469356 SMARCC1Q92922 1105 aaPredicted RBP30.05■■■□□ 2.4
SREBF1-208ENST00000469356 APBA3O96018 575 aa30.04■■■□□ 2.4
SREBF1-208ENST00000469356 DCTN1Q14203 1278 aa30.04■■■□□ 2.4
SREBF1-208ENST00000469356 PIGBQ92521 554 aa30.04■■■□□ 2.4
SREBF1-208ENST00000469356 BAG6P46379 1132 aa30.03■■■□□ 2.4
SREBF1-208ENST00000469356 TRIM35Q9UPQ4 493 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms