RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 PKD1L3Q7Z443 1732 aa11.5□□□□□ -0.57
SSBP1-208ENST00000469123 PPP2R1AP30153 589 aa11.5□□□□□ -0.57
SSBP1-208ENST00000469123 IL13P35225 146 aa11.5□□□□□ -0.57
SSBP1-208ENST00000469123 ZCRB1Q8TBF4 217 aaKnown RBP11.5□□□□□ -0.57
SSBP1-208ENST00000469123 KDRP35968 1356 aa11.5□□□□□ -0.57
SSBP1-208ENST00000469123 SBF2Q86WG5 1849 aa11.49□□□□□ -0.57
SSBP1-208ENST00000469123 AMOTQ4VCS5 1084 aa11.49□□□□□ -0.57
SSBP1-208ENST00000469123 SPG7Q9UQ90 795 aa11.49□□□□□ -0.57
SSBP1-208ENST00000469123 COL3A1P02461 1466 aaPredicted RBP11.49□□□□□ -0.57
SSBP1-208ENST00000469123 USHBP1Q8N6Y0 703 aa11.48□□□□□ -0.57
SSBP1-208ENST00000469123 MARCH10Q8NA82 808 aaPredicted RBP11.48□□□□□ -0.57
SSBP1-208ENST00000469123 MYBBP1AQ9BQG0 1328 aaKnown RBP11.48□□□□□ -0.57
SSBP1-208ENST00000469123 EP400Q96L91 3159 aa11.48□□□□□ -0.57
SSBP1-208ENST00000469123 RGPD3A6NKT7 1758 aaPredicted RBP11.47□□□□□ -0.57
SSBP1-208ENST00000469123 RGPD4Q7Z3J3 1758 aa11.47□□□□□ -0.57
SSBP1-208ENST00000469123 SHANK3Q9BYB0 1731 aa11.47□□□□□ -0.57
SSBP1-208ENST00000469123 BAG6P46379 1132 aa11.47□□□□□ -0.57
SSBP1-208ENST00000469123 CNGB1Q14028 1251 aaPredicted RBP11.47□□□□□ -0.57
SSBP1-208ENST00000469123 TNS1Q9HBL0 1735 aaKnown RBP11.46□□□□□ -0.57
SSBP1-208ENST00000469123 HSP90AB1P08238 724 aaKnown RBP11.46□□□□□ -0.57
SSBP1-208ENST00000469123 PLEKHO1Q53GL0 409 aaPredicted RBP11.46□□□□□ -0.57
SSBP1-208ENST00000469123 SULT6B1Q6IMI4 303 aa11.46□□□□□ -0.57
SSBP1-208ENST00000469123 BCL11BQ9C0K0 894 aaPredicted RBP11.46□□□□□ -0.57
SSBP1-208ENST00000469123 NHSQ6T4R5 1651 aa11.46□□□□□ -0.58
SSBP1-208ENST00000469123 HMGB2P26583 209 aaKnown RBP11.45□□□□□ -0.58
SSBP1-208ENST00000469123 IFNL2Q8IZJ0 200 aa11.45□□□□□ -0.58
SSBP1-208ENST00000469123 DDX54Q8TDD1 881 aaKnown RBP11.45□□□□□ -0.58
SSBP1-208ENST00000469123 PRKRIP1Q9H875 184 aaPredicted RBP11.45□□□□□ -0.58
SSBP1-208ENST00000469123 TRIM37O94972 964 aa11.44□□□□□ -0.58
SSBP1-208ENST00000469123 NKX1-1Q15270 411 aaPredicted RBP11.44□□□□□ -0.58
SSBP1-208ENST00000469123 PNNQ9H307 717 aaKnown RBP11.44□□□□□ -0.58
SSBP1-208ENST00000469123 U2SURPO15042 1029 aaKnown RBP11.43□□□□□ -0.58
SSBP1-208ENST00000469123 C1orf141Q5JVX7 400 aa11.43□□□□□ -0.58
SSBP1-208ENST00000469123 FAM182BQ5T319 152 aa11.43□□□□□ -0.58
SSBP1-208ENST00000469123 PLSCR1O15162 318 aa11.42□□□□□ -0.58
SSBP1-208ENST00000469123 ANP32CO43423 234 aa11.42□□□□□ -0.58
SSBP1-208ENST00000469123 FCHSD2O94868 740 aa11.42□□□□□ -0.58
SSBP1-208ENST00000469123 NEFMP07197 916 aa11.42□□□□□ -0.58
SSBP1-208ENST00000469123 DOT1LQ8TEK3 1739 aa11.41□□□□□ -0.58
SSBP1-208ENST00000469123 CYP27B1O15528 508 aa11.41□□□□□ -0.58
SSBP1-208ENST00000469123 APBA3O96018 575 aa11.41□□□□□ -0.58
SSBP1-208ENST00000469123 U2AF1L5P0DN76 240 aaPredicted RBP11.41□□□□□ -0.58
SSBP1-208ENST00000469123 PHKG2P15735 406 aa11.41□□□□□ -0.58
SSBP1-208ENST00000469123 U2AF1Q01081 240 aaKnown RBP eCLIP11.41□□□□□ -0.581e-7■■■■■ 28.2
SSBP1-208ENST00000469123 ZNF530Q6P9A1 599 aaPredicted RBP11.41□□□□□ -0.58
SSBP1-208ENST00000469123 AEBP1Q8IUX7 1158 aa11.41□□□□□ -0.58
SSBP1-208ENST00000469123 GAS2L2Q8NHY3 880 aa11.41□□□□□ -0.58
SSBP1-208ENST00000469123 BTAF1O14981 1849 aa11.4□□□□□ -0.58
SSBP1-208ENST00000469123 AKAP4Q5JQC9 854 aa11.4□□□□□ -0.58
SSBP1-208ENST00000469123 DCAF5Q96JK2 942 aa11.4□□□□□ -0.58
SSBP1-208ENST00000469123 ERVV-2B6SEH9 535 aa11.39□□□□□ -0.59
SSBP1-208ENST00000469123 HMOX1P09601 288 aa11.39□□□□□ -0.59
SSBP1-208ENST00000469123 ITGB4P16144 1822 aa11.38□□□□□ -0.59
SSBP1-208ENST00000469123 SMARCC1Q92922 1105 aaPredicted RBP11.38□□□□□ -0.59
SSBP1-208ENST00000469123 ACSBG1Q96GR2 724 aa11.38□□□□□ -0.59
SSBP1-208ENST00000469123 CAMKK2Q96RR4 588 aa11.38□□□□□ -0.59
SSBP1-208ENST00000469123 RSPH6AQ9H0K4 717 aa11.38□□□□□ -0.59
SSBP1-208ENST00000469123 RREB1Q92766 1687 aa11.38□□□□□ -0.59
SSBP1-208ENST00000469123 SCN11AQ9UI33 1791 aa11.37□□□□□ -0.59
SSBP1-208ENST00000469123 PRKAR2BP31323 418 aa11.37□□□□□ -0.59
SSBP1-208ENST00000469123 PRIM1P49642 420 aaKnown RBP11.37□□□□□ -0.59
SSBP1-208ENST00000469123 WDR43Q15061 677 aaKnown RBP eCLIP11.37□□□□□ -0.59
SSBP1-208ENST00000469123 SLC27A3Q5K4L6 730 aa11.37□□□□□ -0.59
SSBP1-208ENST00000469123 DEFB132Q7Z7B7 95 aa11.37□□□□□ -0.59
SSBP1-208ENST00000469123 SYTL4Q96C24 671 aaPredicted RBP11.37□□□□□ -0.59
SSBP1-208ENST00000469123 TOGARAM1Q9Y4F4 1720 aa11.36□□□□□ -0.59
SSBP1-208ENST00000469123 EN1Q05925 392 aaPredicted RBP11.36□□□□□ -0.59
SSBP1-208ENST00000469123 TMOD3Q9NYL9 352 aa11.36□□□□□ -0.59
SSBP1-208ENST00000469123 MAP3K5Q99683 1374 aa11.36□□□□□ -0.59
SSBP1-208ENST00000469123 VIRMAQ69YN4 1812 aaKnown RBP11.35□□□□□ -0.59
SSBP1-208ENST00000469123 KCNQ2O43526 872 aa11.35□□□□□ -0.59
SSBP1-208ENST00000469123 HTATSF1O43719 755 aaKnown RBP11.35□□□□□ -0.59
SSBP1-208ENST00000469123 MTHFSDQ2M296 383 aaKnown RBP11.35□□□□□ -0.59
SSBP1-208ENST00000469123 NBPF14Q5TI25 921 aa11.35□□□□□ -0.59
SSBP1-208ENST00000469123 ADAMTS7Q9UKP4 1686 aa11.35□□□□□ -0.59
SSBP1-208ENST00000469123 LY75O60449 1722 aa11.35□□□□□ -0.59
SSBP1-208ENST00000469123 MAPK8IP3Q9UPT6 1336 aa11.35□□□□□ -0.59
SSBP1-208ENST00000469123 MRC1P22897 1456 aa11.34□□□□□ -0.59
SSBP1-208ENST00000469123 GNAT3A8MTJ3 354 aa11.34□□□□□ -0.59
SSBP1-208ENST00000469123 EZH2Q15910 746 aaKnown RBP11.34□□□□□ -0.59
SSBP1-208ENST00000469123 NUP188Q5SRE5 1749 aa11.34□□□□□ -0.59
SSBP1-208ENST00000469123 KDM6AO15550 1401 aaPredicted RBP11.34□□□□□ -0.59
SSBP1-208ENST00000469123 CABP4P57796 275 aa11.33□□□□□ -0.6
SSBP1-208ENST00000469123 MPRIPQ6WCQ1 1025 aa11.33□□□□□ -0.6
SSBP1-208ENST00000469123 PIGBQ92521 554 aa11.33□□□□□ -0.6
SSBP1-208ENST00000469123 RTF1Q92541 710 aaKnown RBP11.33□□□□□ -0.6
SSBP1-208ENST00000469123 ZNF831Q5JPB2 1677 aa11.33□□□□□ -0.6
SSBP1-208ENST00000469123 PALLDQ8WX93 1383 aa11.32□□□□□ -0.6
SSBP1-208ENST00000469123 RNMTO43148 476 aaKnown RBP11.32□□□□□ -0.6
SSBP1-208ENST00000469123 LMOD3Q0VAK6 560 aa11.32□□□□□ -0.6
SSBP1-208ENST00000469123 TXNRD1Q16881 649 aa11.32□□□□□ -0.6
SSBP1-208ENST00000469123 PLEKHF1Q96S99 279 aa11.32□□□□□ -0.6
SSBP1-208ENST00000469123 SLC52A2Q9HAB3 445 aa11.32□□□□□ -0.6
SSBP1-208ENST00000469123 CEMIPQ8WUJ3 1361 aa11.31□□□□□ -0.6
SSBP1-208ENST00000469123 PTF1AQ7RTS3 328 aa11.31□□□□□ -0.6
SSBP1-208ENST00000469123 RUNDC1Q96C34 613 aa11.31□□□□□ -0.6
SSBP1-208ENST00000469123 PHACTR3Q96KR7 559 aa11.31□□□□□ -0.6
SSBP1-208ENST00000469123 TEFQ10587 303 aa11.3□□□□□ -0.6
SSBP1-208ENST00000469123 NFE2L2Q16236 605 aa11.3□□□□□ -0.6
SSBP1-208ENST00000469123 DLG5Q8TDM6 1919 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms