RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 PANK3Q9H999 370 aa14.67□□□□□ -0.06
TGFBR3-205ENST00000468996 ATF5Q9Y2D1 282 aaPredicted RBP14.67□□□□□ -0.06
TGFBR3-205ENST00000468996 INSRP06213 1382 aa14.66□□□□□ -0.06
TGFBR3-205ENST00000468996 FLT4P35916 1363 aa14.65□□□□□ -0.06
TGFBR3-205ENST00000468996 KCNQ4P56696 695 aa14.64□□□□□ -0.07
TGFBR3-205ENST00000468996 LRRC4BQ9NT99 713 aa14.64□□□□□ -0.07
TGFBR3-205ENST00000468996 MEGF6O75095 1541 aa14.63□□□□□ -0.07
TGFBR3-205ENST00000468996 POLKQ9UBT6 870 aa14.63□□□□□ -0.07
TGFBR3-205ENST00000468996 KIF24Q5T7B8 1368 aa14.62□□□□□ -0.07
TGFBR3-205ENST00000468996 WASHC2AQ641Q2 1341 aa14.62□□□□□ -0.07
TGFBR3-205ENST00000468996 RGPD2P0DJD1 1756 aa14.61□□□□□ -0.07
TGFBR3-205ENST00000468996 SLC27A3Q5K4L6 730 aa14.61□□□□□ -0.07
TGFBR3-205ENST00000468996 NHSQ6T4R5 1651 aa14.61□□□□□ -0.07
TGFBR3-205ENST00000468996 RGPD3A6NKT7 1758 aaPredicted RBP14.6□□□□□ -0.07
TGFBR3-205ENST00000468996 RGPD4Q7Z3J3 1758 aa14.6□□□□□ -0.07
TGFBR3-205ENST00000468996 DCAF8L1A6NGE4 600 aa14.6□□□□□ -0.07
TGFBR3-205ENST00000468996 ZNF827Q17R98 1081 aa14.6□□□□□ -0.07
TGFBR3-205ENST00000468996 MPRIPQ6WCQ1 1025 aa14.6□□□□□ -0.07
TGFBR3-205ENST00000468996 EYA1Q99502 592 aa14.6□□□□□ -0.07
TGFBR3-205ENST00000468996 FAM208AQ9UK61 1670 aaKnown RBP14.6□□□□□ -0.07
TGFBR3-205ENST00000468996 KIF20BQ96Q89 1820 aa14.59□□□□□ -0.07
TGFBR3-205ENST00000468996 MYOM1P52179 1685 aa14.59□□□□□ -0.07
TGFBR3-205ENST00000468996 MORC1Q86VD1 984 aa14.59□□□□□ -0.07
TGFBR3-205ENST00000468996 MTFR1LQ9H019 292 aa14.59□□□□□ -0.07
TGFBR3-205ENST00000468996 TFCP2L1Q9NZI6 479 aa14.59□□□□□ -0.07
TGFBR3-205ENST00000468996 SPG7Q9UQ90 795 aa14.59□□□□□ -0.07
TGFBR3-205ENST00000468996 PCDH11XQ9BZA7 1347 aa14.59□□□□□ -0.07
TGFBR3-205ENST00000468996 PCDH11YQ9BZA8 1340 aa14.59□□□□□ -0.07
TGFBR3-205ENST00000468996 CYP27B1O15528 508 aa14.58□□□□□ -0.08
TGFBR3-205ENST00000468996 PTGER2P43116 358 aa14.58□□□□□ -0.08
TGFBR3-205ENST00000468996 CCNL1Q9UK58 526 aaPredicted RBP14.58□□□□□ -0.08
TGFBR3-205ENST00000468996 KNSTRNQ9Y448 316 aa14.58□□□□□ -0.08
TGFBR3-205ENST00000468996 BTAF1O14981 1849 aa14.57□□□□□ -0.08
TGFBR3-205ENST00000468996 EIF4A2Q14240 407 aaKnown RBP14.57□□□□□ -0.08
TGFBR3-205ENST00000468996 AKT1S1Q96B36 256 aa14.57□□□□□ -0.08
TGFBR3-205ENST00000468996 MSH5O43196 834 aa14.56□□□□□ -0.08
TGFBR3-205ENST00000468996 NSD2O96028 1365 aa14.55□□□□□ -0.08
TGFBR3-205ENST00000468996 FHDC1Q9C0D6 1143 aaPredicted RBP14.54□□□□□ -0.08
TGFBR3-205ENST00000468996 ARXQ96QS3 562 aa14.53□□□□□ -0.08
TGFBR3-205ENST00000468996 MAP2P11137 1827 aaKnown RBP14.52□□□□□ -0.08
TGFBR3-205ENST00000468996 KIF7Q2M1P5 1343 aa14.52□□□□□ -0.08
TGFBR3-205ENST00000468996 PNPLA7Q6ZV29 1317 aa14.52□□□□□ -0.08
TGFBR3-205ENST00000468996 CNGB1Q14028 1251 aaPredicted RBP14.52□□□□□ -0.09
TGFBR3-205ENST00000468996 IFNL2Q8IZJ0 200 aa14.52□□□□□ -0.09
TGFBR3-205ENST00000468996 KLHL34Q8N239 644 aa14.52□□□□□ -0.09
TGFBR3-205ENST00000468996 SLC16A10Q8TF71 515 aa14.52□□□□□ -0.09
TGFBR3-205ENST00000468996 PIGBQ92521 554 aa14.52□□□□□ -0.09
TGFBR3-205ENST00000468996 SYT17Q9BSW7 474 aa14.52□□□□□ -0.09
TGFBR3-205ENST00000468996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.52□□□□□ -0.091e-7■■■■□ 19.9
TGFBR3-205ENST00000468996 CASZ1Q86V15 1759 aa14.52□□□□□ -0.09
TGFBR3-205ENST00000468996 NKX1-1Q15270 411 aaPredicted RBP14.51□□□□□ -0.09
TGFBR3-205ENST00000468996 SMARCC1Q92922 1105 aaPredicted RBP14.51□□□□□ -0.09
TGFBR3-205ENST00000468996 SGIP1Q9BQI5 828 aa14.51□□□□□ -0.09
TGFBR3-205ENST00000468996 TMOD3Q9NYL9 352 aa14.51□□□□□ -0.09
TGFBR3-205ENST00000468996 DOT1LQ8TEK3 1739 aa14.5□□□□□ -0.09
TGFBR3-205ENST00000468996 PHKG2P15735 406 aa14.5□□□□□ -0.09
TGFBR3-205ENST00000468996 POLD1P28340 1107 aa14.5□□□□□ -0.09
TGFBR3-205ENST00000468996 SHANK3Q9BYB0 1731 aa14.49□□□□□ -0.09
TGFBR3-205ENST00000468996 PALLDQ8WX93 1383 aa14.49□□□□□ -0.09
TGFBR3-205ENST00000468996 YY1P25490 414 aa14.49□□□□□ -0.09
TGFBR3-205ENST00000468996 PLEKHO1Q53GL0 409 aaPredicted RBP14.49□□□□□ -0.09
TGFBR3-205ENST00000468996 COL23A1Q86Y22 540 aaPredicted RBP14.49□□□□□ -0.09
TGFBR3-205ENST00000468996 HMGB2P26583 209 aaKnown RBP14.48□□□□□ -0.09
TGFBR3-205ENST00000468996 AMER1Q5JTC6 1135 aaPredicted RBP14.48□□□□□ -0.09
TGFBR3-205ENST00000468996 CC2D1BQ5T0F9 858 aaKnown RBP14.48□□□□□ -0.09
TGFBR3-205ENST00000468996 IGSF1Q8N6C5 1336 aa14.47□□□□□ -0.09
TGFBR3-205ENST00000468996 SULT6B1Q6IMI4 303 aa14.47□□□□□ -0.09
TGFBR3-205ENST00000468996 AEBP1Q8IUX7 1158 aa14.47□□□□□ -0.09
TGFBR3-205ENST00000468996 ASAP1Q9ULH1 1129 aa14.47□□□□□ -0.09
TGFBR3-205ENST00000468996 PAPPAQ13219 1627 aa14.47□□□□□ -0.09
TGFBR3-205ENST00000468996 MTHFSP49914 203 aa14.46□□□□□ -0.09
TGFBR3-205ENST00000468996 MSL1Q68DK7 614 aa14.46□□□□□ -0.09
TGFBR3-205ENST00000468996 ZNF530Q6P9A1 599 aaPredicted RBP14.46□□□□□ -0.09
TGFBR3-205ENST00000468996 AK7Q96M32 723 aa14.46□□□□□ -0.09
TGFBR3-205ENST00000468996 NCAPD2Q15021 1401 aa14.46□□□□□ -0.09
TGFBR3-205ENST00000468996 LOC102724428A0A0B4J2F2 783 aa14.45□□□□□ -0.1
TGFBR3-205ENST00000468996 HSP90AB1P08238 724 aaKnown RBP14.45□□□□□ -0.1
TGFBR3-205ENST00000468996 ATP6V1AP38606 617 aa14.45□□□□□ -0.1
TGFBR3-205ENST00000468996 SIK1P57059 783 aa14.45□□□□□ -0.1
TGFBR3-205ENST00000468996 AMOTQ4VCS5 1084 aa14.45□□□□□ -0.1
TGFBR3-205ENST00000468996 SMIM5Q71RC9 77 aa14.45□□□□□ -0.1
TGFBR3-205ENST00000468996 PER1O15534 1290 aaPredicted RBP14.44□□□□□ -0.1
TGFBR3-205ENST00000468996 PHF14O94880 888 aa14.44□□□□□ -0.1
TGFBR3-205ENST00000468996 IL13P35225 146 aa14.44□□□□□ -0.1
TGFBR3-205ENST00000468996 CABP4P57796 275 aa14.44□□□□□ -0.1
TGFBR3-205ENST00000468996 C1orf141Q5JVX7 400 aa14.44□□□□□ -0.1
TGFBR3-205ENST00000468996 PELP1Q8IZL8 1130 aaKnown RBP14.44□□□□□ -0.1
TGFBR3-205ENST00000468996 FLAD1Q8NFF5 587 aa14.44□□□□□ -0.1
TGFBR3-205ENST00000468996 DCAF5Q96JK2 942 aa14.44□□□□□ -0.1
TGFBR3-205ENST00000468996 ATG3Q9NT62 314 aa14.44□□□□□ -0.1
TGFBR3-205ENST00000468996 ANKRD26Q9UPS8 1709 aa14.44□□□□□ -0.1
TGFBR3-205ENST00000468996 ERVV-2B6SEH9 535 aa14.43□□□□□ -0.1
TGFBR3-205ENST00000468996 GPR162Q16538 588 aa14.43□□□□□ -0.1
TGFBR3-205ENST00000468996 RBM42Q9BTD8 480 aaKnown RBP14.43□□□□□ -0.1
TGFBR3-205ENST00000468996 LY75O60449 1722 aa14.43□□□□□ -0.1
TGFBR3-205ENST00000468996 LINC00116Q8NCU8 138 aa14.42□□□□□ -0.1
TGFBR3-205ENST00000468996 PKD1L3Q7Z443 1732 aa14.41□□□□□ -0.1
TGFBR3-205ENST00000468996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.41□□□□□ -0.1
TGFBR3-205ENST00000468996 HMOX1P09601 288 aa14.41□□□□□ -0.1
TGFBR3-205ENST00000468996 ITPK1Q13572 414 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms