RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 FOXJ1Q92949 421 aa6.15□□□□□ -1.42
TMEM39A-204ENST00000468545 OCSTAMPQ9BR26 566 aa6.15□□□□□ -1.42
TMEM39A-204ENST00000468545 MAP3K1Q13233 1512 aa6.15□□□□□ -1.43
TMEM39A-204ENST00000468545 ADCY10Q96PN6 1610 aa6.14□□□□□ -1.43
TMEM39A-204ENST00000468545 MAGEB6P1A0A0J9YX57 407 aa6.14□□□□□ -1.43
TMEM39A-204ENST00000468545 SOX11P35716 441 aa6.14□□□□□ -1.43
TMEM39A-204ENST00000468545 EIF4G2P78344 907 aaKnown RBP eCLIP6.14□□□□□ -1.43
TMEM39A-204ENST00000468545 SKOR1P84550 965 aa6.14□□□□□ -1.43
TMEM39A-204ENST00000468545 AGERQ15109 404 aa6.14□□□□□ -1.43
TMEM39A-204ENST00000468545 TRIM67Q6ZTA4 783 aa6.14□□□□□ -1.43
TMEM39A-204ENST00000468545 ZBTB33Q86T24 672 aa6.14□□□□□ -1.43
TMEM39A-204ENST00000468545 ADAM32Q8TC27 787 aa6.14□□□□□ -1.43
TMEM39A-204ENST00000468545 ZNF592Q92610 1267 aa6.14□□□□□ -1.43
TMEM39A-204ENST00000468545 TROQ12816 1431 aaPredicted RBP6.14□□□□□ -1.43
TMEM39A-204ENST00000468545 MAGI3Q5TCQ9 1506 aa6.14□□□□□ -1.43
TMEM39A-204ENST00000468545 POM121CA8CG34 1229 aa6.13□□□□□ -1.43
TMEM39A-204ENST00000468545 C4orf48Q5BLP8 95 aa6.13□□□□□ -1.43
TMEM39A-204ENST00000468545 ZNF697Q5TEC3 545 aa6.13□□□□□ -1.43
TMEM39A-204ENST00000468545 ZNF598Q86UK7 904 aaKnown RBP6.13□□□□□ -1.43
TMEM39A-204ENST00000468545 C1QTNF2Q9BXJ5 285 aa6.13□□□□□ -1.43
TMEM39A-204ENST00000468545 CARD14Q9BXL6 1004 aa6.13□□□□□ -1.43
TMEM39A-204ENST00000468545 CFDP1Q9UEE9 299 aaPredicted RBP6.13□□□□□ -1.43
TMEM39A-204ENST00000468545 PHLDB1Q86UU1 1377 aa6.13□□□□□ -1.43
TMEM39A-204ENST00000468545 CCNB3Q8WWL7 1395 aa6.13□□□□□ -1.43
TMEM39A-204ENST00000468545 NCOA2Q15596 1464 aa6.13□□□□□ -1.43
TMEM39A-204ENST00000468545 KDM5BQ9UGL1 1544 aa6.13□□□□□ -1.43
TMEM39A-204ENST00000468545 ZCCHC11Q5TAX3 1644 aaKnown RBP6.13□□□□□ -1.43
TMEM39A-204ENST00000468545 CFAP43Q8NDM7 1665 aa6.13□□□□□ -1.43
TMEM39A-204ENST00000468545 WNT7AO00755 349 aa6.12□□□□□ -1.43
TMEM39A-204ENST00000468545 VARSP26640 1264 aaKnown RBP6.12□□□□□ -1.43
TMEM39A-204ENST00000468545 FAM69CQ0P6D2 419 aa6.12□□□□□ -1.43
TMEM39A-204ENST00000468545 ERFEQ4G0M1 354 aa6.12□□□□□ -1.43
TMEM39A-204ENST00000468545 ASXL2Q76L83 1435 aa6.12□□□□□ -1.43
TMEM39A-204ENST00000468545 TRMT44Q8IYL2 757 aaKnown RBP6.12□□□□□ -1.43
TMEM39A-204ENST00000468545 EHBP1L1Q8N3D4 1523 aa6.12□□□□□ -1.43
TMEM39A-204ENST00000468545 EHBP1Q8NDI1 1231 aa6.12□□□□□ -1.43
TMEM39A-204ENST00000468545 ZNF644Q9H582 1327 aaPredicted RBP6.11□□□□□ -1.43
TMEM39A-204ENST00000468545 MCCD1P59942 119 aaPredicted RBP6.11□□□□□ -1.43
TMEM39A-204ENST00000468545 RC3H1Q5TC82 1133 aaKnown RBP6.11□□□□□ -1.43
TMEM39A-204ENST00000468545 FAM174AQ8TBP5 190 aa6.11□□□□□ -1.43
TMEM39A-204ENST00000468545 GLMNQ92990 594 aa6.11□□□□□ -1.43
TMEM39A-204ENST00000468545 SLC10A4Q96EP9 437 aa6.11□□□□□ -1.43
TMEM39A-204ENST00000468545 SUPT6HQ7KZ85 1726 aaKnown RBP6.11□□□□□ -1.43
TMEM39A-204ENST00000468545 TNFRSF10AO00220 468 aa6.1□□□□□ -1.43
TMEM39A-204ENST00000468545 SEMA3FQ13275 785 aa6.1□□□□□ -1.43
TMEM39A-204ENST00000468545 ADAMTS19Q8TE59 1207 aa6.1□□□□□ -1.43
TMEM39A-204ENST00000468545 ALG2Q9H553 416 aa6.1□□□□□ -1.43
TMEM39A-204ENST00000468545 CHIC2Q9UKJ5 165 aa6.1□□□□□ -1.43
TMEM39A-204ENST00000468545 CDV3Q9UKY7 258 aaKnown RBP6.1□□□□□ -1.43
TMEM39A-204ENST00000468545 PCDHB9Q9Y5E1 797 aa6.1□□□□□ -1.43
TMEM39A-204ENST00000468545 KIF14Q15058 1648 aa6.1□□□□□ -1.43
TMEM39A-204ENST00000468545 WDR7Q9Y4E6 1490 aa6.09□□□□□ -1.43
TMEM39A-204ENST00000468545 HNRNPMP52272 730 aaKnown RBP eCLIP6.09□□□□□ -1.43
TMEM39A-204ENST00000468545 PRR20EP86478 221 aa6.09□□□□□ -1.43
TMEM39A-204ENST00000468545 PRR20CP86479 221 aa6.09□□□□□ -1.43
TMEM39A-204ENST00000468545 PRR20DP86480 221 aa6.09□□□□□ -1.43
TMEM39A-204ENST00000468545 PRR20BP86481 221 aa6.09□□□□□ -1.43
TMEM39A-204ENST00000468545 PRR20AP86496 221 aa6.09□□□□□ -1.43
TMEM39A-204ENST00000468545 EFCAB2Q5VUJ9 269 aa6.09□□□□□ -1.43
TMEM39A-204ENST00000468545 DZIP3Q86Y13 1208 aaKnown RBP6.09□□□□□ -1.43
TMEM39A-204ENST00000468545 CALR3Q96L12 384 aaKnown RBP6.09□□□□□ -1.43
TMEM39A-204ENST00000468545 MRGPRX2Q96LB1 330 aa6.09□□□□□ -1.43
TMEM39A-204ENST00000468545 MAP4K5Q9Y4K4 846 aa6.09□□□□□ -1.43
TMEM39A-204ENST00000468545 MYOM3Q5VTT5 1437 aa6.08□□□□□ -1.44
TMEM39A-204ENST00000468545 GDF9O60383 454 aa6.08□□□□□ -1.44
TMEM39A-204ENST00000468545 FOXC1Q12948 553 aa6.08□□□□□ -1.44
TMEM39A-204ENST00000468545 NBPF20Q3BBV1 942 aa6.08□□□□□ -1.44
TMEM39A-204ENST00000468545 PKDCCQ504Y2 493 aa6.08□□□□□ -1.44
TMEM39A-204ENST00000468545 HDGFL1Q5TGJ6 251 aa6.08□□□□□ -1.44
TMEM39A-204ENST00000468545 MPNDQ8N594 471 aa6.08□□□□□ -1.44
TMEM39A-204ENST00000468545 C1orf115Q9H7X2 142 aa6.08□□□□□ -1.44
TMEM39A-204ENST00000468545 PKD2L1Q9P0L9 805 aa6.08□□□□□ -1.44
TMEM39A-204ENST00000468545 GPATCH8Q9UKJ3 1502 aaKnown RBP6.08□□□□□ -1.44
TMEM39A-204ENST00000468545 FGD6Q6ZV73 1430 aa6.08□□□□□ -1.44
TMEM39A-204ENST00000468545 SIAH2O43255 324 aa6.07□□□□□ -1.44
TMEM39A-204ENST00000468545 CDK15Q96Q40 435 aa6.07□□□□□ -1.44
TMEM39A-204ENST00000468545 TLL2Q9Y6L7 1015 aa6.07□□□□□ -1.44
TMEM39A-204ENST00000468545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.07□□□□□ -1.44
TMEM39A-204ENST00000468545 ABCC10Q5T3U5 1492 aa6.07□□□□□ -1.44
TMEM39A-204ENST00000468545 CD109Q6YHK3 1445 aa6.07□□□□□ -1.44
TMEM39A-204ENST00000468545 FAM187AA6NFU0 413 aa6.06□□□□□ -1.44
TMEM39A-204ENST00000468545 DGAT1O75907 488 aa6.06□□□□□ -1.44
TMEM39A-204ENST00000468545 TSPY4P0CV99 314 aa6.06□□□□□ -1.44
TMEM39A-204ENST00000468545 TSPY10P0CW01 314 aa6.06□□□□□ -1.44
TMEM39A-204ENST00000468545 RRP7BPQ9NSQ0 103 aa6.06□□□□□ -1.44
TMEM39A-204ENST00000468545 CEP126Q9P2H0 1117 aa6.06□□□□□ -1.44
TMEM39A-204ENST00000468545 RRBP1Q9P2E9 1410 aaKnown RBP6.06□□□□□ -1.44
TMEM39A-204ENST00000468545 ARHGAP5Q13017 1502 aa6.05□□□□□ -1.44
TMEM39A-204ENST00000468545 ESPNB1AK53 854 aa6.05□□□□□ -1.44
TMEM39A-204ENST00000468545 ADH1CP00326 375 aa6.05□□□□□ -1.44
TMEM39A-204ENST00000468545 VASH1Q7L8A9 365 aaPredicted RBP6.05□□□□□ -1.44
TMEM39A-204ENST00000468545 SEPT12Q8IYM1 358 aa6.05□□□□□ -1.44
TMEM39A-204ENST00000468545 CCDC97Q96F63 343 aaPredicted RBP6.05□□□□□ -1.44
TMEM39A-204ENST00000468545 UCN2Q96RP3 112 aa6.05□□□□□ -1.44
TMEM39A-204ENST00000468545 PLCH2O75038 1416 aa6.05□□□□□ -1.44
TMEM39A-204ENST00000468545 MIA2Q96PC5 1412 aa6.05□□□□□ -1.44
TMEM39A-204ENST00000468545 TTC37Q6PGP7 1564 aa6.05□□□□□ -1.44
TMEM39A-204ENST00000468545 PTPN23Q9H3S7 1636 aa6.04□□□□□ -1.44
TMEM39A-204ENST00000468545 FSHRP23945 695 aa6.04□□□□□ -1.44
TMEM39A-204ENST00000468545 MYT1Q01538 1121 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms