RNA–Protein interactions for RNA: ENST00000468479.5

FDPS-207, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 938 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-207ENST00000468479 CAMKK2Q96RR4 588 aa17.64■□□□□ 0.41
FDPS-207ENST00000468479 RTL1A6NKG5 1358 aa17.64■□□□□ 0.41
FDPS-207ENST00000468479 BCL9O00512 1426 aa17.64■□□□□ 0.41
FDPS-207ENST00000468479 ERICH6BQ5W0A0 696 aa17.63■□□□□ 0.41
FDPS-207ENST00000468479 BCL11BQ9C0K0 894 aaPredicted RBP17.63■□□□□ 0.41
FDPS-207ENST00000468479 MAP3K19Q56UN5 1328 aa17.63■□□□□ 0.41
FDPS-207ENST00000468479 TNNT2P45379 298 aaPredicted RBP17.62■□□□□ 0.41
FDPS-207ENST00000468479 MARCH10Q8NA82 808 aaPredicted RBP17.62■□□□□ 0.41
FDPS-207ENST00000468479 TNS2Q63HR2 1409 aa17.62■□□□□ 0.41
FDPS-207ENST00000468479 HOXC9P31274 260 aa17.61■□□□□ 0.41
FDPS-207ENST00000468479 PPP1R1BQ9UD71 204 aaPredicted RBP17.61■□□□□ 0.41
FDPS-207ENST00000468479 LRRC37A3O60309 1634 aa17.61■□□□□ 0.41
FDPS-207ENST00000468479 DCAF8L1A6NGE4 600 aa17.6■□□□□ 0.41
FDPS-207ENST00000468479 LTV1Q96GA3 475 aaPredicted RBP17.6■□□□□ 0.41
FDPS-207ENST00000468479 KIF24Q5T7B8 1368 aa17.6■□□□□ 0.41
FDPS-207ENST00000468479 PLSCR1O15162 318 aa17.59■□□□□ 0.41
FDPS-207ENST00000468479 PNNQ9H307 717 aaKnown RBP17.59■□□□□ 0.41
FDPS-207ENST00000468479 SUPT16HQ9Y5B9 1047 aaKnown RBP17.59■□□□□ 0.41
FDPS-207ENST00000468479 RUNDC1Q96C34 613 aa17.58■□□□□ 0.4
FDPS-207ENST00000468479 CHD4Q14839 1912 aa17.57■□□□□ 0.4
FDPS-207ENST00000468479 RRS1Q15050 365 aaKnown RBP17.57■□□□□ 0.4
FDPS-207ENST00000468479 COL3A1P02461 1466 aaPredicted RBP17.56■□□□□ 0.4
FDPS-207ENST00000468479 RGPD3A6NKT7 1758 aaPredicted RBP17.56■□□□□ 0.4
FDPS-207ENST00000468479 RGPD4Q7Z3J3 1758 aa17.56■□□□□ 0.4
FDPS-207ENST00000468479 ZNF521Q96K83 1311 aa17.56■□□□□ 0.4
FDPS-207ENST00000468479 LTN1O94822 1766 aa17.56■□□□□ 0.4
FDPS-207ENST00000468479 FLT4P35916 1363 aa17.55■□□□□ 0.4
FDPS-207ENST00000468479 RNF123Q5XPI4 1314 aa17.55■□□□□ 0.4
FDPS-207ENST00000468479 FKBP8Q14318 412 aa17.55■□□□□ 0.4
FDPS-207ENST00000468479 SBF2Q86WG5 1849 aa17.55■□□□□ 0.4
FDPS-207ENST00000468479 CASZ1Q86V15 1759 aa17.54■□□□□ 0.4
FDPS-207ENST00000468479 DIAPH1O60610 1272 aaKnown RBP17.54■□□□□ 0.4
FDPS-207ENST00000468479 SPON1Q9HCB6 807 aa17.54■□□□□ 0.4
FDPS-207ENST00000468479 POLKQ9UBT6 870 aa17.54■□□□□ 0.4
FDPS-207ENST00000468479 PEAK1Q9H792 1746 aa17.54■□□□□ 0.4
FDPS-207ENST00000468479 APAF1O14727 1248 aa17.53■□□□□ 0.4
FDPS-207ENST00000468479 GOLGA2Q08379 1002 aa17.53■□□□□ 0.4
FDPS-207ENST00000468479 RAPGEF4Q8WZA2 1011 aa17.53■□□□□ 0.4
FDPS-207ENST00000468479 WNK3Q9BYP7 1800 aa17.53■□□□□ 0.4
FDPS-207ENST00000468479 FAM208AQ9UK61 1670 aaKnown RBP17.52■□□□□ 0.4
FDPS-207ENST00000468479 U2AF1L5P0DN76 240 aaPredicted RBP17.52■□□□□ 0.4
FDPS-207ENST00000468479 FBLN1P23142 703 aa17.52■□□□□ 0.4
FDPS-207ENST00000468479 U2AF1Q01081 240 aaKnown RBP eCLIP17.52■□□□□ 0.4
FDPS-207ENST00000468479 CCDC27Q2M243 656 aa17.52■□□□□ 0.4
FDPS-207ENST00000468479 RGPD5Q99666 1765 aa17.52■□□□□ 0.4
FDPS-207ENST00000468479 DDX54Q8TDD1 881 aaKnown RBP17.51■□□□□ 0.39
FDPS-207ENST00000468479 KCNQ2O43526 872 aa17.5■□□□□ 0.39
FDPS-207ENST00000468479 CCDC146Q8IYE0 955 aa17.5■□□□□ 0.39
FDPS-207ENST00000468479 ZCRB1Q8TBF4 217 aaKnown RBP17.5■□□□□ 0.39
FDPS-207ENST00000468479 PPM1GO15355 546 aaPredicted RBP17.49■□□□□ 0.39
FDPS-207ENST00000468479 FCHSD2O94868 740 aa17.49■□□□□ 0.39
FDPS-207ENST00000468479 HSP90AB2PQ58FF8 381 aa17.49■□□□□ 0.39
FDPS-207ENST00000468479 SALL2Q9Y467 1007 aaPredicted RBP17.49■□□□□ 0.39
FDPS-207ENST00000468479 E9PSI1 815 aa17.48■□□□□ 0.39
FDPS-207ENST00000468479 TATP17735 454 aaPredicted RBP17.48■□□□□ 0.39
FDPS-207ENST00000468479 NBPF6Q5VWK0 638 aa17.48■□□□□ 0.39
FDPS-207ENST00000468479 TRMT2AQ8IZ69 625 aaKnown RBP17.48■□□□□ 0.39
FDPS-207ENST00000468479 ACSBG1Q96GR2 724 aa17.48■□□□□ 0.39
FDPS-207ENST00000468479 NBPF4Q96M43 638 aa17.48■□□□□ 0.39
FDPS-207ENST00000468479 SLFN5Q08AF3 891 aa17.47■□□□□ 0.39
FDPS-207ENST00000468479 TXNRD1Q16881 649 aa17.47■□□□□ 0.39
FDPS-207ENST00000468479 WDR63Q8IWG1 891 aa17.47■□□□□ 0.39
FDPS-207ENST00000468479 STK32BQ9NY57 414 aa17.47■□□□□ 0.39
FDPS-207ENST00000468479 RCAN3Q9UKA8 241 aa17.47■□□□□ 0.39
FDPS-207ENST00000468479 EMILIN1Q9Y6C2 1016 aa17.47■□□□□ 0.39
FDPS-207ENST00000468479 U2SURPO15042 1029 aaKnown RBP17.46■□□□□ 0.39
FDPS-207ENST00000468479 PTF1AQ7RTS3 328 aa17.46■□□□□ 0.39
FDPS-207ENST00000468479 PELP1Q8IZL8 1130 aaKnown RBP17.46■□□□□ 0.39
FDPS-207ENST00000468479 CDCA7LQ96GN5 454 aa17.45■□□□□ 0.38
FDPS-207ENST00000468479 PLEKHF1Q96S99 279 aa17.45■□□□□ 0.38
FDPS-207ENST00000468479 PCDH11XQ9BZA7 1347 aa17.45■□□□□ 0.38
FDPS-207ENST00000468479 PCDH11YQ9BZA8 1340 aa17.45■□□□□ 0.38
FDPS-207ENST00000468479 MAP2P11137 1827 aaKnown RBP17.44■□□□□ 0.38
FDPS-207ENST00000468479 SENP3-EIF4A1A0A087X0R7 540 aa17.44■□□□□ 0.38
FDPS-207ENST00000468479 NEFMP07197 916 aa17.44■□□□□ 0.38
FDPS-207ENST00000468479 HMGB2P26583 209 aaKnown RBP17.44■□□□□ 0.38
FDPS-207ENST00000468479 DUSP27Q5VZP5 1158 aa17.44■□□□□ 0.38
FDPS-207ENST00000468479 WWC1Q8IX03 1113 aa17.44■□□□□ 0.38
FDPS-207ENST00000468479 USHBP1Q8N6Y0 703 aa17.44■□□□□ 0.38
FDPS-207ENST00000468479 SYTL4Q96C24 671 aaPredicted RBP17.44■□□□□ 0.38
FDPS-207ENST00000468479 MAPK8IP3Q9UPT6 1336 aa17.44■□□□□ 0.38
FDPS-207ENST00000468479 IL13P35225 146 aa17.43■□□□□ 0.38
FDPS-207ENST00000468479 ZNF784Q8NCA9 323 aaPredicted RBP17.43■□□□□ 0.38
FDPS-207ENST00000468479 MEGF6O75095 1541 aa17.42■□□□□ 0.38
FDPS-207ENST00000468479 SLC27A3Q5K4L6 730 aa17.42■□□□□ 0.38
FDPS-207ENST00000468479 PROM2Q8N271 834 aa17.42■□□□□ 0.38
FDPS-207ENST00000468479 NHSQ6T4R5 1651 aa17.42■□□□□ 0.38
FDPS-207ENST00000468479 PRIM1P49642 420 aaKnown RBP17.4■□□□□ 0.38
FDPS-207ENST00000468479 SLC15A2Q16348 729 aa17.4■□□□□ 0.38
FDPS-207ENST00000468479 PPP4R2Q9NY27 417 aa17.4■□□□□ 0.38
FDPS-207ENST00000468479 SPG7Q9UQ90 795 aa17.4■□□□□ 0.38
FDPS-207ENST00000468479 IL16Q14005 1332 aa17.4■□□□□ 0.38
FDPS-207ENST00000468479 TMPOP42166 694 aaKnown RBP17.39■□□□□ 0.37
FDPS-207ENST00000468479 RRP1P56182 461 aaKnown RBP17.39■□□□□ 0.37
FDPS-207ENST00000468479 RSPH6AQ9H0K4 717 aa17.39■□□□□ 0.37
FDPS-207ENST00000468479 ANO8Q9HCE9 1232 aaPredicted RBP17.39■□□□□ 0.37
FDPS-207ENST00000468479 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.38■□□□□ 0.376e-9■□□□□ 10.6
FDPS-207ENST00000468479 PLEKHG2Q9H7P9 1386 aa17.38■□□□□ 0.37
FDPS-207ENST00000468479 MYH16Q9H6N6 1097 aa17.37■□□□□ 0.37
FDPS-207ENST00000468479 CALD1Q05682 793 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms