RNA–Protein interactions for RNA: ENST00000468359.1

CDCA7-207, Transcript of cell division cycle associated 7, humanhuman

TSL 3

Gene CDCA7, Length 906 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-207ENST00000468359 KRT28Q7Z3Y7 464 aa11.92□□□□□ -0.5
CDCA7-207ENST00000468359 NBPF3Q9H094 633 aa11.92□□□□□ -0.5
CDCA7-207ENST00000468359 ATAD2Q6PL18 1390 aa11.92□□□□□ -0.5
CDCA7-207ENST00000468359 SLIT2O94813 1529 aa11.91□□□□□ -0.5
CDCA7-207ENST00000468359 GOLGA8CPA6NN73 597 aa11.91□□□□□ -0.5
CDCA7-207ENST00000468359 PRAM1Q96QH2 718 aa11.91□□□□□ -0.5
CDCA7-207ENST00000468359 PLA2G2EQ9NZK7 142 aa11.91□□□□□ -0.5
CDCA7-207ENST00000468359 PCDHGA10Q9Y5H3 936 aa11.91□□□□□ -0.5
CDCA7-207ENST00000468359 RGPD8O14715 1765 aaPredicted RBP11.91□□□□□ -0.5
CDCA7-207ENST00000468359 ANKARQ7Z5J8 1434 aa11.91□□□□□ -0.5
CDCA7-207ENST00000468359 ADGRB2O60241 1585 aa11.91□□□□□ -0.5
CDCA7-207ENST00000468359 SBNO1A3KN83 1393 aa11.91□□□□□ -0.5
CDCA7-207ENST00000468359 PPP1R3GB7ZBB8 358 aa11.9□□□□□ -0.5
CDCA7-207ENST00000468359 PSME1Q06323 249 aa11.9□□□□□ -0.5
CDCA7-207ENST00000468359 MRPL50Q8N5N7 158 aaKnown RBP11.9□□□□□ -0.5
CDCA7-207ENST00000468359 GJD4Q96KN9 370 aaPredicted RBP11.9□□□□□ -0.5
CDCA7-207ENST00000468359 TNS3Q68CZ2 1445 aa11.89□□□□□ -0.51
CDCA7-207ENST00000468359 USP32Q8NFA0 1604 aa11.89□□□□□ -0.51
CDCA7-207ENST00000468359 EP400Q96L91 3159 aa11.88□□□□□ -0.51
CDCA7-207ENST00000468359 BHMG1C9JSJ3 638 aaPredicted RBP11.88□□□□□ -0.51
CDCA7-207ENST00000468359 UNC5CLQ8IV45 518 aa11.88□□□□□ -0.51
CDCA7-207ENST00000468359 EPAS1Q99814 870 aa11.88□□□□□ -0.51
CDCA7-207ENST00000468359 DPYSL4O14531 572 aa11.87□□□□□ -0.51
CDCA7-207ENST00000468359 CCDC125Q86Z20 511 aa11.87□□□□□ -0.51
CDCA7-207ENST00000468359 POGKQ9P215 609 aa11.87□□□□□ -0.51
CDCA7-207ENST00000468359 ARHGEF10O15013 1369 aa11.87□□□□□ -0.51
CDCA7-207ENST00000468359 GLI3P10071 1580 aa11.87□□□□□ -0.51
CDCA7-207ENST00000468359 RALGAPBQ86X10 1494 aa11.86□□□□□ -0.51
CDCA7-207ENST00000468359 NWD2Q9ULI1 1742 aa11.86□□□□□ -0.51
CDCA7-207ENST00000468359 EIF3AQ14152 1382 aaKnown RBP11.85□□□□□ -0.51
CDCA7-207ENST00000468359 ONECUT3O60422 494 aaPredicted RBP11.85□□□□□ -0.51
CDCA7-207ENST00000468359 SAFB2Q14151 953 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDCA7-207ENST00000468359 DCAF11Q8TEB1 546 aa11.85□□□□□ -0.51
CDCA7-207ENST00000468359 RTN4Q9NQC3 1192 aaKnown RBP11.85□□□□□ -0.51
CDCA7-207ENST00000468359 TRAK1Q9UPV9 953 aa11.85□□□□□ -0.51
CDCA7-207ENST00000468359 ABCA3Q99758 1704 aa11.85□□□□□ -0.51
CDCA7-207ENST00000468359 TRPM3Q9HCF6 1732 aaPredicted RBP11.85□□□□□ -0.51
CDCA7-207ENST00000468359 TULP4Q9NRJ4 1543 aa11.85□□□□□ -0.51
CDCA7-207ENST00000468359 VPS72Q15906 364 aa11.84□□□□□ -0.51
CDCA7-207ENST00000468359 PRR36Q9H6K5 1346 aa11.84□□□□□ -0.51
CDCA7-207ENST00000468359 WASLO00401 505 aaPredicted RBP11.83□□□□□ -0.52
CDCA7-207ENST00000468359 PMFBP1Q8TBY8 1022 aa11.83□□□□□ -0.52
CDCA7-207ENST00000468359 CABLES1Q8TDN4 633 aa11.83□□□□□ -0.52
CDCA7-207ENST00000468359 WNT2BQ93097 391 aa11.83□□□□□ -0.52
CDCA7-207ENST00000468359 RABGEF1Q9UJ41 708 aa11.83□□□□□ -0.52
CDCA7-207ENST00000468359 KDM2AQ9Y2K7 1162 aa11.83□□□□□ -0.52
CDCA7-207ENST00000468359 ALS2Q96Q42 1657 aa11.83□□□□□ -0.52
CDCA7-207ENST00000468359 CLSPNQ9HAW4 1339 aa11.83□□□□□ -0.52
CDCA7-207ENST00000468359 PLCH1Q4KWH8 1693 aa11.82□□□□□ -0.52
CDCA7-207ENST00000468359 THSD4Q6ZMP0 1018 aa11.82□□□□□ -0.52
CDCA7-207ENST00000468359 ARHGEF28Q8N1W1 1705 aaKnown RBP11.81□□□□□ -0.52
CDCA7-207ENST00000468359 FAM83GA6ND36 823 aa11.81□□□□□ -0.52
CDCA7-207ENST00000468359 HAP1P54257 671 aaPredicted RBP11.81□□□□□ -0.52
CDCA7-207ENST00000468359 PTPN5P54829 565 aa11.81□□□□□ -0.52
CDCA7-207ENST00000468359 HIRIP3Q9BW71 556 aaPredicted RBP11.81□□□□□ -0.52
CDCA7-207ENST00000468359 MINK1Q8N4C8 1332 aaPredicted RBP11.81□□□□□ -0.52
CDCA7-207ENST00000468359 SRCAPQ6ZRS2 3230 aa11.81□□□□□ -0.52
CDCA7-207ENST00000468359 GPRASP1Q5JY77 1395 aa11.8□□□□□ -0.52
CDCA7-207ENST00000468359 BRWD3Q6RI45 1802 aa11.8□□□□□ -0.52
CDCA7-207ENST00000468359 KIAA1210Q9ULL0 1709 aa11.8□□□□□ -0.52
CDCA7-207ENST00000468359 BLMP54132 1417 aaPredicted RBP11.79□□□□□ -0.52
CDCA7-207ENST00000468359 ATP7BP35670 1465 aa11.79□□□□□ -0.52
CDCA7-207ENST00000468359 SPDYE16A6NNV3 312 aaPredicted RBP11.79□□□□□ -0.52
CDCA7-207ENST00000468359 LMOD2Q6P5Q4 547 aa11.79□□□□□ -0.52
CDCA7-207ENST00000468359 PAXIP1Q6ZW49 1069 aaPredicted RBP11.79□□□□□ -0.52
CDCA7-207ENST00000468359 SEPT12Q8IYM1 358 aa11.79□□□□□ -0.52
CDCA7-207ENST00000468359 CCER1Q8TC90 406 aaPredicted RBP11.79□□□□□ -0.52
CDCA7-207ENST00000468359 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
CDCA7-207ENST00000468359 WDR70Q9NW82 654 aa11.79□□□□□ -0.52
CDCA7-207ENST00000468359 NRAPQ86VF7 1730 aa11.79□□□□□ -0.52
CDCA7-207ENST00000468359 CRYBG1Q9Y4K1 1723 aa11.79□□□□□ -0.52
CDCA7-207ENST00000468359 ITSN1Q15811 1721 aa11.78□□□□□ -0.52
CDCA7-207ENST00000468359 COL14A1Q05707 1796 aaKnown RBP11.78□□□□□ -0.52
CDCA7-207ENST00000468359 COL9A1P20849 921 aa11.78□□□□□ -0.52
CDCA7-207ENST00000468359 C6orf132Q5T0Z8 1188 aa11.78□□□□□ -0.52
CDCA7-207ENST00000468359 PDIA6Q15084 440 aa11.77□□□□□ -0.53
CDCA7-207ENST00000468359 E2F4Q16254 413 aa11.77□□□□□ -0.53
CDCA7-207ENST00000468359 LAPTM4BQ86VI4 370 aa11.77□□□□□ -0.53
CDCA7-207ENST00000468359 NUDT16Q96DE0 195 aaKnown RBP11.77□□□□□ -0.53
CDCA7-207ENST00000468359 PROX2Q3B8N5 592 aa11.76□□□□□ -0.53
CDCA7-207ENST00000468359 NGDNQ8NEJ9 315 aaKnown RBP11.76□□□□□ -0.53
CDCA7-207ENST00000468359 ANKK1Q8NFD2 765 aa11.76□□□□□ -0.53
CDCA7-207ENST00000468359 BTG4Q9NY30 223 aa11.76□□□□□ -0.53
CDCA7-207ENST00000468359 POLR3AO14802 1390 aaPredicted RBP11.76□□□□□ -0.53
CDCA7-207ENST00000468359 TOPAZ1Q8N9V7 1692 aa11.75□□□□□ -0.53
CDCA7-207ENST00000468359 PLEKHG3A1L390 1219 aa11.75□□□□□ -0.53
CDCA7-207ENST00000468359 KRT27Q7Z3Y8 459 aa11.75□□□□□ -0.53
CDCA7-207ENST00000468359 DDX12PQ92771 950 aa11.75□□□□□ -0.53
CDCA7-207ENST00000468359 TRPM1Q7Z4N2 1603 aa11.75□□□□□ -0.53
CDCA7-207ENST00000468359 SIN3AQ96ST3 1273 aa11.74□□□□□ -0.53
CDCA7-207ENST00000468359 CDK19Q9BWU1 502 aa11.74□□□□□ -0.53
CDCA7-207ENST00000468359 CCDC9Q9Y3X0 531 aaKnown RBP11.74□□□□□ -0.53
CDCA7-207ENST00000468359 SPATA31A5Q5VU36 1347 aa11.73□□□□□ -0.53
CDCA7-207ENST00000468359 SPATA31A7Q8IWB4 1347 aa11.73□□□□□ -0.53
CDCA7-207ENST00000468359 TONSLQ96HA7 1378 aa11.72□□□□□ -0.53
CDCA7-207ENST00000468359 NBR1Q14596 966 aa11.72□□□□□ -0.53
CDCA7-207ENST00000468359 FAM98CQ17RN3 349 aaKnown RBP11.72□□□□□ -0.53
CDCA7-207ENST00000468359 NBPF1Q3BBV0 1214 aa11.72□□□□□ -0.53
CDCA7-207ENST00000468359 NBPF8Q3BBV2 869 aa11.72□□□□□ -0.53
CDCA7-207ENST00000468359 ARIH1Q9Y4X5 557 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms