RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 RGPD3A6NKT7 1758 aaPredicted RBP25.41■■□□□ 1.66
YBX1-204ENST00000467957 RGPD4Q7Z3J3 1758 aa25.41■■□□□ 1.66
YBX1-204ENST00000467957 NHSQ6T4R5 1651 aa25.4■■□□□ 1.66
YBX1-204ENST00000467957 DDX54Q8TDD1 881 aaKnown RBP25.4■■□□□ 1.66
YBX1-204ENST00000467957 PLSCR1O15162 318 aa25.39■■□□□ 1.66
YBX1-204ENST00000467957 CC2D1BQ5T0F9 858 aaKnown RBP25.39■■□□□ 1.66
YBX1-204ENST00000467957 PTF1AQ7RTS3 328 aa25.39■■□□□ 1.66
YBX1-204ENST00000467957 RREB1Q92766 1687 aa25.39■■□□□ 1.65
YBX1-204ENST00000467957 IGSF1Q8N6C5 1336 aa25.36■■□□□ 1.65
YBX1-204ENST00000467957 PKD1L3Q7Z443 1732 aa25.35■■□□□ 1.65
YBX1-204ENST00000467957 KCNQ2O43526 872 aa25.35■■□□□ 1.65
YBX1-204ENST00000467957 PLEKHG2Q9H7P9 1386 aa25.34■■□□□ 1.65
YBX1-204ENST00000467957 ACSBG1Q96GR2 724 aa25.34■■□□□ 1.65
YBX1-204ENST00000467957 MTHFSP49914 203 aa25.33■■□□□ 1.65
YBX1-204ENST00000467957 PCDH11XQ9BZA7 1347 aa25.33■■□□□ 1.64
YBX1-204ENST00000467957 PCDH11YQ9BZA8 1340 aa25.33■■□□□ 1.64
YBX1-204ENST00000467957 NUP188Q5SRE5 1749 aa25.32■■□□□ 1.64
YBX1-204ENST00000467957 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.32■■□□□ 1.641e-13■■□□□ 11.9
YBX1-204ENST00000467957 ZEB1P37275 1124 aaPredicted RBP25.31■■□□□ 1.64
YBX1-204ENST00000467957 DOT1LQ8TEK3 1739 aa25.29■■□□□ 1.64
YBX1-204ENST00000467957 BTAF1O14981 1849 aa25.29■■□□□ 1.64
YBX1-204ENST00000467957 IL13P35225 146 aa25.29■■□□□ 1.64
YBX1-204ENST00000467957 SPG7Q9UQ90 795 aa25.29■■□□□ 1.64
YBX1-204ENST00000467957 CYP27B1O15528 508 aa25.28■■□□□ 1.64
YBX1-204ENST00000467957 PROM2Q8N271 834 aa25.27■■□□□ 1.64
YBX1-204ENST00000467957 KAT6BQ8WYB5 2073 aa25.26■■□□□ 1.63
YBX1-204ENST00000467957 PRIM1P49642 420 aaKnown RBP25.25■■□□□ 1.63
YBX1-204ENST00000467957 KDRP35968 1356 aa25.25■■□□□ 1.63
YBX1-204ENST00000467957 CNGB1Q14028 1251 aaPredicted RBP25.24■■□□□ 1.63
YBX1-204ENST00000467957 NKX1-1Q15270 411 aaPredicted RBP25.24■■□□□ 1.63
YBX1-204ENST00000467957 NBPF14Q5TI25 921 aa25.24■■□□□ 1.63
YBX1-204ENST00000467957 TXNRD1Q16881 649 aa25.23■■□□□ 1.63
YBX1-204ENST00000467957 PSDA5PKW4 1024 aaPredicted RBP25.21■■□□□ 1.63
YBX1-204ENST00000467957 DIAPH1O60610 1272 aaKnown RBP25.21■■□□□ 1.63
YBX1-204ENST00000467957 R3HDM1Q15032 1099 aaKnown RBP25.21■■□□□ 1.63
YBX1-204ENST00000467957 SULT6B1Q6IMI4 303 aa25.21■■□□□ 1.63
YBX1-204ENST00000467957 AEBP1Q8IUX7 1158 aa25.21■■□□□ 1.63
YBX1-204ENST00000467957 SYTL4Q96C24 671 aaPredicted RBP25.21■■□□□ 1.63
YBX1-204ENST00000467957 COL3A1P02461 1466 aaPredicted RBP25.21■■□□□ 1.63
YBX1-204ENST00000467957 IFNL2Q8IZJ0 200 aa25.2■■□□□ 1.62
YBX1-204ENST00000467957 PHKG2P15735 406 aa25.19■■□□□ 1.62
YBX1-204ENST00000467957 AMOTQ4VCS5 1084 aa25.19■■□□□ 1.62
YBX1-204ENST00000467957 PLEKHO1Q53GL0 409 aaPredicted RBP25.19■■□□□ 1.62
YBX1-204ENST00000467957 TOGARAM1Q9Y4F4 1720 aa25.19■■□□□ 1.62
YBX1-204ENST00000467957 PPP2R1AP30153 589 aa25.16■■□□□ 1.62
YBX1-204ENST00000467957 LY75O60449 1722 aa25.15■■□□□ 1.62
YBX1-204ENST00000467957 ITGB4P16144 1822 aa25.15■■□□□ 1.62
YBX1-204ENST00000467957 SLC27A3Q5K4L6 730 aa25.14■■□□□ 1.62
YBX1-204ENST00000467957 ANO8Q9HCE9 1232 aaPredicted RBP25.14■■□□□ 1.62
YBX1-204ENST00000467957 PAPPAQ13219 1627 aa25.13■■□□□ 1.61
YBX1-204ENST00000467957 CFAP53Q96M91 514 aa25.13■■□□□ 1.61
YBX1-204ENST00000467957 HSP90AB1P08238 724 aaKnown RBP25.12■■□□□ 1.61
YBX1-204ENST00000467957 MPRIPQ6WCQ1 1025 aa25.12■■□□□ 1.61
YBX1-204ENST00000467957 DDX10Q13206 875 aaKnown RBP25.11■■□□□ 1.61
YBX1-204ENST00000467957 ZNF530Q6P9A1 599 aaPredicted RBP25.11■■□□□ 1.61
YBX1-204ENST00000467957 LRRC4BQ9NT99 713 aa25.11■■□□□ 1.61
YBX1-204ENST00000467957 HMOX1P09601 288 aa25.1■■□□□ 1.61
YBX1-204ENST00000467957 LRP5O75197 1615 aa25.1■■□□□ 1.61
YBX1-204ENST00000467957 DCAF5Q96JK2 942 aa25.09■■□□□ 1.61
YBX1-204ENST00000467957 STK32BQ9NY57 414 aa25.09■■□□□ 1.61
YBX1-204ENST00000467957 SLC15A2Q16348 729 aa25.08■■□□□ 1.61
YBX1-204ENST00000467957 PIGBQ92521 554 aa25.08■■□□□ 1.61
YBX1-204ENST00000467957 ERVV-2B6SEH9 535 aa25.07■■□□□ 1.6
YBX1-204ENST00000467957 C1orf141Q5JVX7 400 aa25.07■■□□□ 1.6
YBX1-204ENST00000467957 SMARCC1Q92922 1105 aaPredicted RBP25.07■■□□□ 1.6
YBX1-204ENST00000467957 TMOD3Q9NYL9 352 aa25.07■■□□□ 1.6
YBX1-204ENST00000467957 U2SURPO15042 1029 aaKnown RBP25.06■■□□□ 1.6
YBX1-204ENST00000467957 KDM6AO15550 1401 aaPredicted RBP25.05■■□□□ 1.6
YBX1-204ENST00000467957 NUDCQ9Y266 331 aa25.05■■□□□ 1.6
YBX1-204ENST00000467957 PALLDQ8WX93 1383 aa25.05■■□□□ 1.6
YBX1-204ENST00000467957 CASZ1Q86V15 1759 aa25.04■■□□□ 1.6
YBX1-204ENST00000467957 AKAP4Q5JQC9 854 aa25.04■■□□□ 1.6
YBX1-204ENST00000467957 CCNL1Q9UK58 526 aaPredicted RBP25.04■■□□□ 1.6
YBX1-204ENST00000467957 RALBP1Q15311 655 aa25.03■■□□□ 1.6
YBX1-204ENST00000467957 HMGB2P26583 209 aaKnown RBP25.02■■□□□ 1.6
YBX1-204ENST00000467957 AKT1S1Q96B36 256 aa25.02■■□□□ 1.6
YBX1-204ENST00000467957 ZNF827Q17R98 1081 aa25.01■■□□□ 1.59
YBX1-204ENST00000467957 SRCAPQ6ZRS2 3230 aa25.01■■□□□ 1.59
YBX1-204ENST00000467957 SCN11AQ9UI33 1791 aa25■■□□□ 1.59
YBX1-204ENST00000467957 KCNQ4P56696 695 aa25■■□□□ 1.59
YBX1-204ENST00000467957 MTHFSDQ2M296 383 aaKnown RBP25■■□□□ 1.59
YBX1-204ENST00000467957 QSER1Q2KHR3 1735 aa25■■□□□ 1.59
YBX1-204ENST00000467957 ATG3Q9NT62 314 aa24.99■■□□□ 1.59
YBX1-204ENST00000467957 ASAP1Q9ULH1 1129 aa24.99■■□□□ 1.59
YBX1-204ENST00000467957 RSPH6AQ9H0K4 717 aa24.98■■□□□ 1.59
YBX1-204ENST00000467957 C5P01031 1676 aa24.97■■□□□ 1.59
YBX1-204ENST00000467957 CABP4P57796 275 aa24.97■■□□□ 1.59
YBX1-204ENST00000467957 PDGFDQ9GZP0 370 aaPredicted RBP24.97■■□□□ 1.59
YBX1-204ENST00000467957 TAF1LQ8IZX4 1826 aa24.97■■□□□ 1.59
YBX1-204ENST00000467957 ADAMTS7Q9UKP4 1686 aa24.97■■□□□ 1.59
YBX1-204ENST00000467957 U2AF1L5P0DN76 240 aaPredicted RBP24.96■■□□□ 1.59
YBX1-204ENST00000467957 U2AF1Q01081 240 aaKnown RBP eCLIP24.96■■□□□ 1.59
YBX1-204ENST00000467957 LOC102724428A0A0B4J2F2 783 aa24.95■■□□□ 1.58
YBX1-204ENST00000467957 FCHSD2O94868 740 aa24.95■■□□□ 1.58
YBX1-204ENST00000467957 SIK1P57059 783 aa24.95■■□□□ 1.58
YBX1-204ENST00000467957 GAS2L2Q8NHY3 880 aa24.95■■□□□ 1.58
YBX1-204ENST00000467957 SPON1Q9HCB6 807 aa24.95■■□□□ 1.58
YBX1-204ENST00000467957 PRKAR2BP31323 418 aa24.94■■□□□ 1.58
YBX1-204ENST00000467957 ZNF831Q5JPB2 1677 aa24.94■■□□□ 1.58
YBX1-204ENST00000467957 RNMTO43148 476 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 176.2 ms