RNA–Protein interactions for RNA: ENST00000467849.1

CCNL1-210, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-210ENST00000467849 CNTNAP3Q9BZ76 1288 aa9.34□□□□□ -0.91
CCNL1-210ENST00000467849 CDC14CA4D256 554 aa9.33□□□□□ -0.92
CCNL1-210ENST00000467849 KRT76Q01546 638 aa9.33□□□□□ -0.92
CCNL1-210ENST00000467849 CYP2U1Q7Z449 544 aa9.33□□□□□ -0.92
CCNL1-210ENST00000467849 PRM3Q9NNZ6 103 aa9.33□□□□□ -0.92
CCNL1-210ENST00000467849 SENP3-EIF4A1A0A087X0R7 540 aa9.32□□□□□ -0.92
CCNL1-210ENST00000467849 VWA5B2Q8N398 1253 aa9.32□□□□□ -0.92
CCNL1-210ENST00000467849 MTMR14Q8NCE2 650 aa9.32□□□□□ -0.92
CCNL1-210ENST00000467849 ESF1Q9H501 851 aaKnown RBP9.32□□□□□ -0.92
CCNL1-210ENST00000467849 RNF225M0QZC1 329 aaPredicted RBP9.31□□□□□ -0.92
CCNL1-210ENST00000467849 SLURP2P0DP57 97 aa9.3□□□□□ -0.92
CCNL1-210ENST00000467849 NLRP3Q96P20 1036 aa9.3□□□□□ -0.92
CCNL1-210ENST00000467849 KCNMA1Q12791 1236 aa9.29□□□□□ -0.92
CCNL1-210ENST00000467849 A0A1W2PRU2 124 aa9.28□□□□□ -0.92
CCNL1-210ENST00000467849 MEN1O00255 615 aa9.28□□□□□ -0.92
CCNL1-210ENST00000467849 FOXR1Q6PIV2 292 aa9.28□□□□□ -0.92
CCNL1-210ENST00000467849 PRICKLE2Q7Z3G6 844 aa9.28□□□□□ -0.92
CCNL1-210ENST00000467849 PCDHB11Q9Y5F2 797 aa9.28□□□□□ -0.92
CCNL1-210ENST00000467849 CLN3Q13286 438 aa9.27□□□□□ -0.93
CCNL1-210ENST00000467849 WDR44Q5JSH3 913 aa9.27□□□□□ -0.93
CCNL1-210ENST00000467849 RNFT1Q5M7Z0 435 aa9.27□□□□□ -0.93
CCNL1-210ENST00000467849 SVOPQ8N4V2 548 aa9.27□□□□□ -0.93
CCNL1-210ENST00000467849 DYRK1BQ9Y463 629 aa9.27□□□□□ -0.93
CCNL1-210ENST00000467849 H7C1W4 665 aa9.26□□□□□ -0.93
CCNL1-210ENST00000467849 TRAK2O60296 914 aa9.26□□□□□ -0.93
CCNL1-210ENST00000467849 GPR37L1O60883 481 aa9.26□□□□□ -0.93
CCNL1-210ENST00000467849 SLC27A3Q5K4L6 730 aa9.26□□□□□ -0.93
CCNL1-210ENST00000467849 TRIM22Q8IYM9 498 aa9.26□□□□□ -0.93
CCNL1-210ENST00000467849 SNRKQ9NRH2 765 aa9.26□□□□□ -0.93
CCNL1-210ENST00000467849 MYCP01106 439 aaPredicted RBP9.25□□□□□ -0.93
CCNL1-210ENST00000467849 GNRH1P01148 92 aa9.25□□□□□ -0.93
CCNL1-210ENST00000467849 SRSF11Q05519 484 aaKnown RBP9.25□□□□□ -0.93
CCNL1-210ENST00000467849 TPRNQ4KMQ1 711 aa9.25□□□□□ -0.93
CCNL1-210ENST00000467849 ADAMTS8Q9UP79 889 aa9.25□□□□□ -0.93
CCNL1-210ENST00000467849 EIF4G2P78344 907 aaKnown RBP eCLIP9.24□□□□□ -0.93
CCNL1-210ENST00000467849 ZNF385CQ66K41 422 aaPredicted RBP9.24□□□□□ -0.93
CCNL1-210ENST00000467849 GRIP2Q9C0E4 1043 aa9.24□□□□□ -0.93
CCNL1-210ENST00000467849 SPATA31C2B4DYI2 1134 aa9.23□□□□□ -0.93
CCNL1-210ENST00000467849 RHOQP17081 205 aa9.23□□□□□ -0.93
CCNL1-210ENST00000467849 SCTRP47872 440 aa9.23□□□□□ -0.93
CCNL1-210ENST00000467849 OSBPL3Q9H4L5 887 aa9.23□□□□□ -0.93
CCNL1-210ENST00000467849 CEP126Q9P2H0 1117 aa9.23□□□□□ -0.93
CCNL1-210ENST00000467849 ZNF837Q96EG3 531 aaPredicted RBP9.22□□□□□ -0.93
CCNL1-210ENST00000467849 ADAMTS2O95450 1211 aa9.21□□□□□ -0.94
CCNL1-210ENST00000467849 MAP3K10Q02779 954 aa9.21□□□□□ -0.94
CCNL1-210ENST00000467849 NBPF10Q6P3W6 841 aaKnown RBP9.21□□□□□ -0.94
CCNL1-210ENST00000467849 NBPF15Q8N660 670 aa9.21□□□□□ -0.94
CCNL1-210ENST00000467849 TRERF1Q96PN7 1200 aa9.21□□□□□ -0.94
CCNL1-210ENST00000467849 ARHGEF10LQ9HCE6 1279 aa9.21□□□□□ -0.94
CCNL1-210ENST00000467849 MBIPQ9NS73 344 aa9.21□□□□□ -0.94
CCNL1-210ENST00000467849 CUEDC1Q9NWM3 386 aaPredicted RBP9.21□□□□□ -0.94
CCNL1-210ENST00000467849 POU4F2Q12837 409 aa9.2□□□□□ -0.94
CCNL1-210ENST00000467849 RIPOR1Q6ZS17 1223 aa9.2□□□□□ -0.94
CCNL1-210ENST00000467849 TAS1R3Q7RTX0 852 aa9.2□□□□□ -0.94
CCNL1-210ENST00000467849 ESYT1Q9BSJ8 1104 aa9.2□□□□□ -0.94
CCNL1-210ENST00000467849 ENAMQ9NRM1 1142 aa9.2□□□□□ -0.94
CCNL1-210ENST00000467849 WASLO00401 505 aaPredicted RBP9.19□□□□□ -0.94
CCNL1-210ENST00000467849 ARHGEF15O94989 841 aa9.19□□□□□ -0.94
CCNL1-210ENST00000467849 GTF2E1P29083 439 aaPredicted RBP9.19□□□□□ -0.94
CCNL1-210ENST00000467849 ESCO1Q5FWF5 840 aa9.19□□□□□ -0.94
CCNL1-210ENST00000467849 TMEM151AQ8N4L1 468 aa9.19□□□□□ -0.94
CCNL1-210ENST00000467849 SIRT1Q96EB6 747 aa9.19□□□□□ -0.94
CCNL1-210ENST00000467849 MARSP56192 900 aaKnown RBP9.18□□□□□ -0.94
CCNL1-210ENST00000467849 USP4Q13107 963 aa9.18□□□□□ -0.94
CCNL1-210ENST00000467849 GAS6Q14393 721 aa9.18□□□□□ -0.94
CCNL1-210ENST00000467849 CNKSR1Q969H4 720 aa9.18□□□□□ -0.94
CCNL1-210ENST00000467849 SCARF2Q96GP6 870 aaPredicted RBP9.18□□□□□ -0.94
CCNL1-210ENST00000467849 TIMMDC1Q9NPL8 285 aa9.18□□□□□ -0.94
CCNL1-210ENST00000467849 NSFL1CQ9UNZ2 370 aaKnown RBP9.18□□□□□ -0.94
CCNL1-210ENST00000467849 TBC1D2BQ9UPU7 963 aa9.18□□□□□ -0.94
CCNL1-210ENST00000467849 F11P03951 625 aa9.17□□□□□ -0.94
CCNL1-210ENST00000467849 RASSF7Q02833 373 aa9.17□□□□□ -0.94
CCNL1-210ENST00000467849 DBN1Q16643 649 aa9.17□□□□□ -0.94
CCNL1-210ENST00000467849 SLFNL1Q499Z3 407 aa9.17□□□□□ -0.94
CCNL1-210ENST00000467849 GAS2L1Q99501 681 aaPredicted RBP9.17□□□□□ -0.94
CCNL1-210ENST00000467849 GDF11O95390 407 aa9.16□□□□□ -0.94
CCNL1-210ENST00000467849 GSK3AP49840 483 aa9.16□□□□□ -0.94
CCNL1-210ENST00000467849 KANK3Q6NY19 840 aa9.16□□□□□ -0.94
CCNL1-210ENST00000467849 WHAMMQ8TF30 809 aa9.16□□□□□ -0.94
CCNL1-210ENST00000467849 CCDC85AQ96PX6 553 aaPredicted RBP9.16□□□□□ -0.94
CCNL1-210ENST00000467849 DOLKQ9UPQ8 538 aa9.16□□□□□ -0.94
CCNL1-210ENST00000467849 CENPCQ03188 943 aa9.15□□□□□ -0.94
CCNL1-210ENST00000467849 LBRQ14739 615 aaKnown RBP9.15□□□□□ -0.94
CCNL1-210ENST00000467849 WASHC4Q2M389 1173 aa9.15□□□□□ -0.94
CCNL1-210ENST00000467849 GNASQ5JWF2 1037 aa9.15□□□□□ -0.94
CCNL1-210ENST00000467849 XAGE2Q96GT9 111 aa9.15□□□□□ -0.94
CCNL1-210ENST00000467849 ZSCAN10Q96SZ4 725 aaPredicted RBP9.15□□□□□ -0.94
CCNL1-210ENST00000467849 NUCKS1Q9H1E3 243 aaKnown RBP9.15□□□□□ -0.94
CCNL1-210ENST00000467849 LRRC4BQ9NT99 713 aa9.15□□□□□ -0.94
CCNL1-210ENST00000467849 A0A1B0GTH6 734 aa9.14□□□□□ -0.95
CCNL1-210ENST00000467849 IL2RAP01589 272 aa9.14□□□□□ -0.95
CCNL1-210ENST00000467849 CELA2BP08218 269 aaPredicted RBP9.14□□□□□ -0.95
CCNL1-210ENST00000467849 LYPD4Q6UWN0 246 aa9.14□□□□□ -0.95
CCNL1-210ENST00000467849 RNF135Q8IUD6 432 aa9.14□□□□□ -0.95
CCNL1-210ENST00000467849 GTPBP3Q969Y2 492 aaKnown RBP9.14□□□□□ -0.95
CCNL1-210ENST00000467849 RAB6BQ9NRW1 208 aa9.14□□□□□ -0.95
CCNL1-210ENST00000467849 IGF1RP08069 1367 aa9.13□□□□□ -0.95
CCNL1-210ENST00000467849 SOX11P35716 441 aa9.13□□□□□ -0.95
CCNL1-210ENST00000467849 IRF5Q13568 498 aa9.13□□□□□ -0.95
CCNL1-210ENST00000467849 PHTF2Q8N3S3 785 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms