RNA–Protein interactions for RNA: ENST00000467331.5

APTX-214, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-214ENST00000467331 C1orf115Q9H7X2 142 aa12.01□□□□□ -0.49
APTX-214ENST00000467331 PTPRCP08575 1304 aa12.01□□□□□ -0.49
APTX-214ENST00000467331 WASLO00401 505 aaPredicted RBP12.01□□□□□ -0.49
APTX-214ENST00000467331 BAG4O95429 457 aaKnown RBP12.01□□□□□ -0.49
APTX-214ENST00000467331 HMOX1P09601 288 aa12.01□□□□□ -0.49
APTX-214ENST00000467331 OSCARQ8IYS5 282 aa12.01□□□□□ -0.49
APTX-214ENST00000467331 THUMPD2Q9BTF0 503 aaKnown RBP12.01□□□□□ -0.49
APTX-214ENST00000467331 USP26Q9BXU7 913 aa12.01□□□□□ -0.49
APTX-214ENST00000467331 EMILIN1Q9Y6C2 1016 aa12.01□□□□□ -0.49
APTX-214ENST00000467331 TOPAZ1Q8N9V7 1692 aa12□□□□□ -0.49
APTX-214ENST00000467331 SSFA2P28290 1259 aa12□□□□□ -0.49
APTX-214ENST00000467331 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12□□□□□ -0.49
APTX-214ENST00000467331 TRIM44Q96DX7 344 aaPredicted RBP12□□□□□ -0.49
APTX-214ENST00000467331 TUBGCP6Q96RT7 1819 aa11.99□□□□□ -0.49
APTX-214ENST00000467331 HS1BP3Q53T59 392 aa11.99□□□□□ -0.49
APTX-214ENST00000467331 COG3Q96JB2 828 aa11.99□□□□□ -0.49
APTX-214ENST00000467331 ERBB4Q15303 1308 aa11.99□□□□□ -0.49
APTX-214ENST00000467331 RTL1A6NKG5 1358 aa11.98□□□□□ -0.49
APTX-214ENST00000467331 CHL1O00533 1208 aa11.98□□□□□ -0.49
APTX-214ENST00000467331 CASC1Q6TDU7 716 aa11.98□□□□□ -0.49
APTX-214ENST00000467331 ARXQ96QS3 562 aa11.98□□□□□ -0.49
APTX-214ENST00000467331 RBM42Q9BTD8 480 aaKnown RBP11.98□□□□□ -0.49
APTX-214ENST00000467331 N4BP2Q86UW6 1770 aaPredicted RBP11.98□□□□□ -0.49
APTX-214ENST00000467331 FBXO31Q5XUX0 539 aaPredicted RBP11.98□□□□□ -0.49
APTX-214ENST00000467331 CEP85Q6P2H3 762 aa11.98□□□□□ -0.49
APTX-214ENST00000467331 NME9Q86XW9 330 aa11.98□□□□□ -0.49
APTX-214ENST00000467331 NAP1L5Q96NT1 182 aaPredicted RBP11.98□□□□□ -0.49
APTX-214ENST00000467331 OSBPL3Q9H4L5 887 aa11.98□□□□□ -0.49
APTX-214ENST00000467331 RRP9O43818 475 aaKnown RBP11.97□□□□□ -0.49
APTX-214ENST00000467331 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.97□□□□□ -0.49
APTX-214ENST00000467331 ARHGEF10O15013 1369 aa11.97□□□□□ -0.49
APTX-214ENST00000467331 OVOS2A0A0J9YW53 1432 aa11.97□□□□□ -0.49
APTX-214ENST00000467331 OVOS2Q6IE36 1432 aa11.97□□□□□ -0.49
APTX-214ENST00000467331 REC8O95072 547 aa11.96□□□□□ -0.49
APTX-214ENST00000467331 TPM2P07951 284 aa11.96□□□□□ -0.49
APTX-214ENST00000467331 NASPP49321 788 aaPredicted RBP11.96□□□□□ -0.49
APTX-214ENST00000467331 WAPLQ7Z5K2 1190 aa11.96□□□□□ -0.49
APTX-214ENST00000467331 CCDC61Q9Y6R9 512 aa11.96□□□□□ -0.49
APTX-214ENST00000467331 ST18O60284 1047 aa11.96□□□□□ -0.5
APTX-214ENST00000467331 STAG3Q9UJ98 1225 aa11.96□□□□□ -0.5
APTX-214ENST00000467331 DDX49Q9Y6V7 483 aaKnown RBP11.96□□□□□ -0.5
APTX-214ENST00000467331 TRHP20396 242 aaPredicted RBP11.95□□□□□ -0.5
APTX-214ENST00000467331 TERF1P54274 439 aa11.95□□□□□ -0.5
APTX-214ENST00000467331 ANP32BQ92688 251 aaKnown RBP11.95□□□□□ -0.5
APTX-214ENST00000467331 IL17RAQ96F46 866 aa11.95□□□□□ -0.5
APTX-214ENST00000467331 LMBRD1Q9NUN5 540 aa11.95□□□□□ -0.5
APTX-214ENST00000467331 MSH6P52701 1360 aa11.95□□□□□ -0.5
APTX-214ENST00000467331 CRB1P82279 1406 aa11.95□□□□□ -0.5
APTX-214ENST00000467331 SDSP20132 328 aa11.95□□□□□ -0.5
APTX-214ENST00000467331 FBLN1P23142 703 aa11.95□□□□□ -0.5
APTX-214ENST00000467331 ZSCAN30Q86W11 494 aa11.95□□□□□ -0.5
APTX-214ENST00000467331 NUDT16Q96DE0 195 aaKnown RBP11.95□□□□□ -0.5
APTX-214ENST00000467331 ELL2O00472 640 aaPredicted RBP11.94□□□□□ -0.5
APTX-214ENST00000467331 HMMRO75330 724 aa11.94□□□□□ -0.5
APTX-214ENST00000467331 USP31Q70CQ4 1352 aa11.94□□□□□ -0.5
APTX-214ENST00000467331 LRRC37A3O60309 1634 aa11.94□□□□□ -0.5
APTX-214ENST00000467331 PEAK1Q9H792 1746 aa11.94□□□□□ -0.5
APTX-214ENST00000467331 FMN2Q9NZ56 1722 aa11.94□□□□□ -0.5
APTX-214ENST00000467331 METP08581 1390 aa11.93□□□□□ -0.5
APTX-214ENST00000467331 MCM2P49736 904 aa11.93□□□□□ -0.5
APTX-214ENST00000467331 SSH2Q76I76 1423 aa11.93□□□□□ -0.5
APTX-214ENST00000467331 PDLIM2Q96JY6 352 aa11.93□□□□□ -0.5
APTX-214ENST00000467331 TTC21BQ7Z4L5 1316 aa11.93□□□□□ -0.5
APTX-214ENST00000467331 ERC2O15083 957 aa11.93□□□□□ -0.5
APTX-214ENST00000467331 EPB41L2O43491 1005 aaKnown RBP11.93□□□□□ -0.5
APTX-214ENST00000467331 FOXD4L1Q9NU39 408 aa11.93□□□□□ -0.5
APTX-214ENST00000467331 FAM83GA6ND36 823 aa11.92□□□□□ -0.5
APTX-214ENST00000467331 EIF4A2Q14240 407 aaKnown RBP11.92□□□□□ -0.5
APTX-214ENST00000467331 DIP2BQ9P265 1576 aa11.92□□□□□ -0.5
APTX-214ENST00000467331 CACNA1FO60840 1977 aa11.92□□□□□ -0.5
APTX-214ENST00000467331 AK9Q5TCS8 1911 aa11.92□□□□□ -0.5
APTX-214ENST00000467331 GLIPR1L2Q4G1C9 344 aa11.92□□□□□ -0.5
APTX-214ENST00000467331 FAM208AQ9UK61 1670 aaKnown RBP11.91□□□□□ -0.5
APTX-214ENST00000467331 SALL3Q9BXA9 1300 aa11.91□□□□□ -0.5
APTX-214ENST00000467331 CCT4P50991 539 aaKnown RBP11.91□□□□□ -0.5
APTX-214ENST00000467331 ZSCAN23Q3MJ62 389 aa11.91□□□□□ -0.5
APTX-214ENST00000467331 ILDR2Q71H61 639 aa11.91□□□□□ -0.5
APTX-214ENST00000467331 ZRANB1Q9UGI0 708 aa11.91□□□□□ -0.5
APTX-214ENST00000467331 SOS1Q07889 1333 aaPredicted RBP11.91□□□□□ -0.5
APTX-214ENST00000467331 OFD1O75665 1012 aa11.9□□□□□ -0.5
APTX-214ENST00000467331 ANAPC15P60006 121 aa11.9□□□□□ -0.5
APTX-214ENST00000467331 RRS1Q15050 365 aaKnown RBP11.9□□□□□ -0.5
APTX-214ENST00000467331 MCTP1Q6DN14 999 aa11.9□□□□□ -0.5
APTX-214ENST00000467331 C16orf71Q8IYS4 520 aaPredicted RBP11.9□□□□□ -0.5
APTX-214ENST00000467331 XRN1Q8IZH2 1706 aaKnown RBP11.9□□□□□ -0.5
APTX-214ENST00000467331 HDGFP51858 240 aaKnown RBP11.9□□□□□ -0.5
APTX-214ENST00000467331 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.9□□□□□ -0.5
APTX-214ENST00000467331 OTUD7AQ8TE49 926 aaPredicted RBP11.9□□□□□ -0.5
APTX-214ENST00000467331 ZDHHC9Q9Y397 364 aa11.9□□□□□ -0.5
APTX-214ENST00000467331 PXDNLA1KZ92 1463 aa11.9□□□□□ -0.5
APTX-214ENST00000467331 PRR36Q9H6K5 1346 aa11.89□□□□□ -0.51
APTX-214ENST00000467331 PLEKHG3A1L390 1219 aa11.89□□□□□ -0.51
APTX-214ENST00000467331 MBD3O95983 291 aa11.89□□□□□ -0.51
APTX-214ENST00000467331 MCM5P33992 734 aa11.89□□□□□ -0.51
APTX-214ENST00000467331 CUL4AQ13619 759 aa11.89□□□□□ -0.51
APTX-214ENST00000467331 DCTN1Q14203 1278 aa11.89□□□□□ -0.51
APTX-214ENST00000467331 MEIS3Q99687 375 aa11.89□□□□□ -0.51
APTX-214ENST00000467331 USP6P35125 1406 aa11.89□□□□□ -0.51
APTX-214ENST00000467331 KDRP35968 1356 aa11.89□□□□□ -0.51
APTX-214ENST00000467331 AOX1Q06278 1338 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms