RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 LYSMD3Q7Z3D4 306 aa10.82□□□□□ -0.68
ATG3-204ENST00000467275 CEP126Q9P2H0 1117 aa10.82□□□□□ -0.68
ATG3-204ENST00000467275 SCTRP47872 440 aa10.81□□□□□ -0.68
ATG3-204ENST00000467275 PRICKLE2Q7Z3G6 844 aa10.81□□□□□ -0.68
ATG3-204ENST00000467275 CYP2U1Q7Z449 544 aa10.81□□□□□ -0.68
ATG3-204ENST00000467275 A0A1W2PRU2 124 aa10.8□□□□□ -0.68
ATG3-204ENST00000467275 ITGA6P23229 1130 aa10.8□□□□□ -0.68
ATG3-204ENST00000467275 RNF144AP50876 292 aaPredicted RBP10.8□□□□□ -0.68
ATG3-204ENST00000467275 NLRP3Q96P20 1036 aa10.8□□□□□ -0.68
ATG3-204ENST00000467275 GDPD2Q9HCC8 539 aa10.8□□□□□ -0.68
ATG3-204ENST00000467275 CDC14CA4D256 554 aa10.79□□□□□ -0.68
ATG3-204ENST00000467275 ABL2P42684 1182 aa10.79□□□□□ -0.68
ATG3-204ENST00000467275 IRF5Q13568 498 aa10.79□□□□□ -0.68
ATG3-204ENST00000467275 LORP23490 312 aaPredicted RBP10.78□□□□□ -0.68
ATG3-204ENST00000467275 GPR161Q8N6U8 529 aaKnown RBP10.78□□□□□ -0.68
ATG3-204ENST00000467275 NANOS1Q8WY41 292 aaKnown RBP10.78□□□□□ -0.68
ATG3-204ENST00000467275 SENP3-EIF4A1A0A087X0R7 540 aa10.77□□□□□ -0.69
ATG3-204ENST00000467275 MYCP01106 439 aaPredicted RBP10.77□□□□□ -0.69
ATG3-204ENST00000467275 GPC1P35052 558 aa10.77□□□□□ -0.69
ATG3-204ENST00000467275 VWA5B2Q8N398 1253 aa10.77□□□□□ -0.69
ATG3-204ENST00000467275 OSBPL3Q9H4L5 887 aa10.77□□□□□ -0.69
ATG3-204ENST00000467275 RHOQP17081 205 aa10.76□□□□□ -0.69
ATG3-204ENST00000467275 VAC14Q08AM6 782 aa10.76□□□□□ -0.69
ATG3-204ENST00000467275 SLC27A3Q5K4L6 730 aa10.76□□□□□ -0.69
ATG3-204ENST00000467275 SV2AQ7L0J3 742 aa10.76□□□□□ -0.69
ATG3-204ENST00000467275 CCDC85AQ96PX6 553 aaPredicted RBP10.76□□□□□ -0.69
ATG3-204ENST00000467275 ARHGEF10LQ9HCE6 1279 aa10.76□□□□□ -0.69
ATG3-204ENST00000467275 TRAK2O60296 914 aa10.75□□□□□ -0.69
ATG3-204ENST00000467275 MCM6Q14566 821 aa10.75□□□□□ -0.69
ATG3-204ENST00000467275 SLFNL1Q499Z3 407 aa10.75□□□□□ -0.69
ATG3-204ENST00000467275 CNTNAP3BQ96NU0 1288 aa10.75□□□□□ -0.69
ATG3-204ENST00000467275 CDCA7Q9BWT1 371 aaPredicted RBP10.75□□□□□ -0.69
ATG3-204ENST00000467275 CNTNAP3Q9BZ76 1288 aa10.75□□□□□ -0.69
ATG3-204ENST00000467275 CLN3Q13286 438 aa10.74□□□□□ -0.69
ATG3-204ENST00000467275 COL25A1Q9BXS0 654 aaPredicted RBP10.74□□□□□ -0.69
ATG3-204ENST00000467275 WASHC4Q2M389 1173 aa10.73□□□□□ -0.69
ATG3-204ENST00000467275 GNRH1P01148 92 aa10.72□□□□□ -0.69
ATG3-204ENST00000467275 KRT76Q01546 638 aa10.72□□□□□ -0.69
ATG3-204ENST00000467275 RNF135Q8IUD6 432 aa10.72□□□□□ -0.69
ATG3-204ENST00000467275 RAB6BQ9NRW1 208 aa10.72□□□□□ -0.69
ATG3-204ENST00000467275 DOLKQ9UPQ8 538 aa10.72□□□□□ -0.69
ATG3-204ENST00000467275 POU4F2Q12837 409 aa10.7□□□□□ -0.7
ATG3-204ENST00000467275 USP4Q13107 963 aa10.7□□□□□ -0.7
ATG3-204ENST00000467275 TSGA10IPQ3SY00 556 aa10.7□□□□□ -0.7
ATG3-204ENST00000467275 PHTF2Q8N3S3 785 aa10.7□□□□□ -0.7
ATG3-204ENST00000467275 GRIP2Q9C0E4 1043 aa10.7□□□□□ -0.7
ATG3-204ENST00000467275 SEMA3FQ13275 785 aa10.69□□□□□ -0.7
ATG3-204ENST00000467275 RIPOR1Q6ZS17 1223 aa10.69□□□□□ -0.7
ATG3-204ENST00000467275 CNKSR1Q969H4 720 aa10.69□□□□□ -0.7
ATG3-204ENST00000467275 OXLD1Q5BKU9 147 aa10.68□□□□□ -0.7
ATG3-204ENST00000467275 RNFT1Q5M7Z0 435 aa10.68□□□□□ -0.7
ATG3-204ENST00000467275 ESYT1Q9BSJ8 1104 aa10.68□□□□□ -0.7
ATG3-204ENST00000467275 CUEDC1Q9NWM3 386 aaPredicted RBP10.68□□□□□ -0.7
ATG3-204ENST00000467275 NBPF10Q6P3W6 841 aaKnown RBP10.67□□□□□ -0.7
ATG3-204ENST00000467275 NBPF15Q8N660 670 aa10.67□□□□□ -0.7
ATG3-204ENST00000467275 GAS2L1Q99501 681 aaPredicted RBP10.67□□□□□ -0.7
ATG3-204ENST00000467275 COG6Q9Y2V7 657 aa10.67□□□□□ -0.7
ATG3-204ENST00000467275 DYRK1BQ9Y463 629 aa10.67□□□□□ -0.7
ATG3-204ENST00000467275 IL2RAP01589 272 aa10.66□□□□□ -0.7
ATG3-204ENST00000467275 SOX11P35716 441 aa10.66□□□□□ -0.7
ATG3-204ENST00000467275 CENPCQ03188 943 aa10.66□□□□□ -0.7
ATG3-204ENST00000467275 ESCO1Q5FWF5 840 aa10.66□□□□□ -0.7
ATG3-204ENST00000467275 TAS1R3Q7RTX0 852 aa10.66□□□□□ -0.7
ATG3-204ENST00000467275 SIRT1Q96EB6 747 aa10.66□□□□□ -0.7
ATG3-204ENST00000467275 SPATA31C2B4DYI2 1134 aa10.65□□□□□ -0.7
ATG3-204ENST00000467275 GTF2E1P29083 439 aaPredicted RBP10.65□□□□□ -0.7
ATG3-204ENST00000467275 WDR44Q5JSH3 913 aa10.65□□□□□ -0.7
ATG3-204ENST00000467275 WWC1Q8IX03 1113 aa10.65□□□□□ -0.7
ATG3-204ENST00000467275 TRIM22Q8IYM9 498 aa10.65□□□□□ -0.7
ATG3-204ENST00000467275 GMCL1Q96IK5 515 aa10.65□□□□□ -0.7
ATG3-204ENST00000467275 TIMMDC1Q9NPL8 285 aa10.65□□□□□ -0.7
ATG3-204ENST00000467275 WASLO00401 505 aaPredicted RBP10.64□□□□□ -0.71
ATG3-204ENST00000467275 FOXR1Q6PIV2 292 aa10.64□□□□□ -0.71
ATG3-204ENST00000467275 XAGE2Q96GT9 111 aa10.64□□□□□ -0.71
ATG3-204ENST00000467275 ZSCAN10Q96SZ4 725 aaPredicted RBP10.64□□□□□ -0.71
ATG3-204ENST00000467275 H7C1W4 665 aa10.63□□□□□ -0.71
ATG3-204ENST00000467275 ZNF837Q96EG3 531 aaPredicted RBP10.63□□□□□ -0.71
ATG3-204ENST00000467275 CHIC2Q9UKJ5 165 aa10.63□□□□□ -0.71
ATG3-204ENST00000467275 RAD21O60216 631 aa10.62□□□□□ -0.71
ATG3-204ENST00000467275 DBN1Q16643 649 aa10.62□□□□□ -0.71
ATG3-204ENST00000467275 MAP7D1Q3KQU3 841 aa10.62□□□□□ -0.71
ATG3-204ENST00000467275 TMEM214Q6NUQ4 689 aaKnown RBP10.62□□□□□ -0.71
ATG3-204ENST00000467275 PLPP7Q8NBV4 271 aa10.62□□□□□ -0.71
ATG3-204ENST00000467275 GNASQ5JWF2 1037 aa10.61□□□□□ -0.71
ATG3-204ENST00000467275 PHKA2P46019 1235 aa10.6□□□□□ -0.71
ATG3-204ENST00000467275 FLIIQ13045 1269 aa10.6□□□□□ -0.71
ATG3-204ENST00000467275 SVOPQ8N4V2 548 aa10.6□□□□□ -0.71
ATG3-204ENST00000467275 ETNK1Q9HBU6 452 aa10.6□□□□□ -0.71
ATG3-204ENST00000467275 HRH3Q9Y5N1 445 aa10.6□□□□□ -0.71
ATG3-204ENST00000467275 GPR25O00155 361 aa10.59□□□□□ -0.71
ATG3-204ENST00000467275 STAU1O95793 577 aaKnown RBP10.59□□□□□ -0.71
ATG3-204ENST00000467275 F11P03951 625 aa10.59□□□□□ -0.71
ATG3-204ENST00000467275 SLURP2P0DP57 97 aa10.59□□□□□ -0.71
ATG3-204ENST00000467275 GTPBP3Q969Y2 492 aaKnown RBP10.59□□□□□ -0.71
ATG3-204ENST00000467275 POM121Q96HA1 1249 aa10.59□□□□□ -0.71
ATG3-204ENST00000467275 FHDC1Q9C0D6 1143 aaPredicted RBP10.59□□□□□ -0.71
ATG3-204ENST00000467275 ADAMTS2O95450 1211 aa10.58□□□□□ -0.72
ATG3-204ENST00000467275 UBTFP17480 764 aaKnown RBP10.58□□□□□ -0.72
ATG3-204ENST00000467275 GAS6Q14393 721 aa10.58□□□□□ -0.72
ATG3-204ENST00000467275 ZNF385CQ66K41 422 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms