RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-216ENST00000467134 SCN11AQ9UI33 1791 aa14.3□□□□□ -0.12
MUC1-216ENST00000467134 MTHFSDQ2M296 383 aaKnown RBP14.3□□□□□ -0.12
MUC1-216ENST00000467134 LTV1Q96GA3 475 aaPredicted RBP14.3□□□□□ -0.12
MUC1-216ENST00000467134 CRB1P82279 1406 aa14.3□□□□□ -0.12
MUC1-216ENST00000467134 KDM3BQ7LBC6 1761 aa14.29□□□□□ -0.12
MUC1-216ENST00000467134 RRP1P56182 461 aaKnown RBP14.29□□□□□ -0.12
MUC1-216ENST00000467134 PLEKHO1Q53GL0 409 aaPredicted RBP14.29□□□□□ -0.12
MUC1-216ENST00000467134 CERKQ8TCT0 537 aa14.29□□□□□ -0.12
MUC1-216ENST00000467134 CFAP44Q96MT7 982 aa14.29□□□□□ -0.12
MUC1-216ENST00000467134 GNAT3A8MTJ3 354 aa14.28□□□□□ -0.12
MUC1-216ENST00000467134 HAP1P54257 671 aaPredicted RBP14.28□□□□□ -0.12
MUC1-216ENST00000467134 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.28□□□□□ -0.12
MUC1-216ENST00000467134 CEMIPQ8WUJ3 1361 aa14.28□□□□□ -0.12
MUC1-216ENST00000467134 SOS1Q07889 1333 aaPredicted RBP14.27□□□□□ -0.12
MUC1-216ENST00000467134 ZBTB7CA1YPR0 619 aa14.27□□□□□ -0.13
MUC1-216ENST00000467134 UBAP1LF5GYI3 381 aa14.27□□□□□ -0.13
MUC1-216ENST00000467134 RTF1Q92541 710 aaKnown RBP14.27□□□□□ -0.13
MUC1-216ENST00000467134 CACNA1FO60840 1977 aa14.27□□□□□ -0.13
MUC1-216ENST00000467134 SHANK3Q9BYB0 1731 aa14.27□□□□□ -0.13
MUC1-216ENST00000467134 CARD10Q9BWT7 1032 aa14.26□□□□□ -0.13
MUC1-216ENST00000467134 MEGF6O75095 1541 aa14.25□□□□□ -0.13
MUC1-216ENST00000467134 MRC1P22897 1456 aa14.25□□□□□ -0.13
MUC1-216ENST00000467134 JCADQ9P266 1359 aa14.25□□□□□ -0.13
MUC1-216ENST00000467134 CHL1O00533 1208 aa14.25□□□□□ -0.13
MUC1-216ENST00000467134 BRPF1P55201 1214 aaPredicted RBP14.25□□□□□ -0.13
MUC1-216ENST00000467134 FKBP8Q14318 412 aa14.25□□□□□ -0.13
MUC1-216ENST00000467134 CHRNA2Q15822 529 aa14.25□□□□□ -0.13
MUC1-216ENST00000467134 AKAP4Q5JQC9 854 aa14.25□□□□□ -0.13
MUC1-216ENST00000467134 RAPGEF4Q8WZA2 1011 aa14.25□□□□□ -0.13
MUC1-216ENST00000467134 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.24□□□□□ -0.13
MUC1-216ENST00000467134 USHBP1Q8N6Y0 703 aa14.24□□□□□ -0.13
MUC1-216ENST00000467134 NLRP2Q9NX02 1062 aa14.24□□□□□ -0.13
MUC1-216ENST00000467134 CSB-PGBD3P0DP91 1061 aa14.23□□□□□ -0.13
MUC1-216ENST00000467134 TATP17735 454 aaPredicted RBP14.23□□□□□ -0.13
MUC1-216ENST00000467134 RARSP54136 660 aaKnown RBP14.23□□□□□ -0.13
MUC1-216ENST00000467134 ALDH1L2Q3SY69 923 aa14.23□□□□□ -0.13
MUC1-216ENST00000467134 SPG7Q9UQ90 795 aa14.23□□□□□ -0.13
MUC1-216ENST00000467134 FAM83GA6ND36 823 aa14.22□□□□□ -0.13
MUC1-216ENST00000467134 EXOSC9Q06265 439 aaKnown RBP14.22□□□□□ -0.13
MUC1-216ENST00000467134 ZNF530Q6P9A1 599 aaPredicted RBP14.22□□□□□ -0.13
MUC1-216ENST00000467134 MBIPQ9NS73 344 aa14.22□□□□□ -0.13
MUC1-216ENST00000467134 SLIT2O94813 1529 aa14.21□□□□□ -0.13
MUC1-216ENST00000467134 C1orf141Q5JVX7 400 aa14.21□□□□□ -0.13
MUC1-216ENST00000467134 TSR2Q969E8 191 aaKnown RBP14.21□□□□□ -0.13
MUC1-216ENST00000467134 THUMPD2Q9BTF0 503 aaKnown RBP14.21□□□□□ -0.13
MUC1-216ENST00000467134 DISP2A7MBM2 1401 aa14.21□□□□□ -0.13
MUC1-216ENST00000467134 SPATA31A6Q5VVP1 1343 aa14.2□□□□□ -0.14
MUC1-216ENST00000467134 LRP6O75581 1613 aa14.2□□□□□ -0.14
MUC1-216ENST00000467134 PLEKHG5O94827 1062 aa14.2□□□□□ -0.14
MUC1-216ENST00000467134 HSP90AB1P08238 724 aaKnown RBP14.2□□□□□ -0.14
MUC1-216ENST00000467134 PDE3AQ14432 1141 aa14.2□□□□□ -0.14
MUC1-216ENST00000467134 MS4A1P11836 297 aa14.19□□□□□ -0.14
MUC1-216ENST00000467134 PIP4K2BP78356 416 aa14.19□□□□□ -0.14
MUC1-216ENST00000467134 MCM10Q7L590 875 aa14.19□□□□□ -0.14
MUC1-216ENST00000467134 IL17REQ8NFR9 667 aa14.19□□□□□ -0.14
MUC1-216ENST00000467134 KIF16BQ96L93 1317 aa14.18□□□□□ -0.14
MUC1-216ENST00000467134 DCTN1Q14203 1278 aa14.18□□□□□ -0.14
MUC1-216ENST00000467134 TAF7Q15545 349 aaPredicted RBP14.18□□□□□ -0.14
MUC1-216ENST00000467134 TOM1L2Q6ZVM7 507 aa14.18□□□□□ -0.14
MUC1-216ENST00000467134 CHMP4AQ9BY43 222 aa14.18□□□□□ -0.14
MUC1-216ENST00000467134 PPP4R2Q9NY27 417 aa14.18□□□□□ -0.14
MUC1-216ENST00000467134 PCDH11XQ9BZA7 1347 aa14.17□□□□□ -0.14
MUC1-216ENST00000467134 PCDH11YQ9BZA8 1340 aa14.17□□□□□ -0.14
MUC1-216ENST00000467134 N4BP2Q86UW6 1770 aaPredicted RBP14.17□□□□□ -0.14
MUC1-216ENST00000467134 PAPPAQ13219 1627 aa14.17□□□□□ -0.14
MUC1-216ENST00000467134 RNMTO43148 476 aaKnown RBP14.17□□□□□ -0.14
MUC1-216ENST00000467134 EVA1CP58658 441 aa14.17□□□□□ -0.14
MUC1-216ENST00000467134 AAMPQ13685 434 aa14.17□□□□□ -0.14
MUC1-216ENST00000467134 IFNL2Q8IZJ0 200 aa14.17□□□□□ -0.14
MUC1-216ENST00000467134 KDM6AO15550 1401 aaPredicted RBP14.16□□□□□ -0.14
MUC1-216ENST00000467134 VAMP4O75379 141 aa14.16□□□□□ -0.14
MUC1-216ENST00000467134 HOXB7P09629 217 aa14.16□□□□□ -0.14
MUC1-216ENST00000467134 IL2RBP14784 551 aa14.16□□□□□ -0.14
MUC1-216ENST00000467134 PHKG2P15735 406 aa14.16□□□□□ -0.14
MUC1-216ENST00000467134 CDCA7Q9BWT1 371 aaPredicted RBP14.16□□□□□ -0.14
MUC1-216ENST00000467134 BTG4Q9NY30 223 aa14.16□□□□□ -0.14
MUC1-216ENST00000467134 THRAP3Q9Y2W1 955 aaKnown RBP14.16□□□□□ -0.14
MUC1-216ENST00000467134 UBR2Q8IWV8 1755 aa14.15□□□□□ -0.14
MUC1-216ENST00000467134 NKX1-1Q15270 411 aaPredicted RBP14.15□□□□□ -0.14
MUC1-216ENST00000467134 TWISTNBQ3B726 338 aaPredicted RBP14.15□□□□□ -0.14
MUC1-216ENST00000467134 LARP1Q6PKG0 1096 aaKnown RBP14.15□□□□□ -0.14
MUC1-216ENST00000467134 ARHGAP45Q92619 1136 aa14.15□□□□□ -0.14
MUC1-216ENST00000467134 DCAF5Q96JK2 942 aa14.15□□□□□ -0.14
MUC1-216ENST00000467134 TSPYL4Q9UJ04 414 aa14.15□□□□□ -0.14
MUC1-216ENST00000467134 LAS1LQ9Y4W2 734 aaKnown RBP14.15□□□□□ -0.14
MUC1-216ENST00000467134 BCAR3O75815 825 aa14.14□□□□□ -0.15
MUC1-216ENST00000467134 TEFQ10587 303 aa14.14□□□□□ -0.15
MUC1-216ENST00000467134 ZCRB1Q8TBF4 217 aaKnown RBP14.14□□□□□ -0.15
MUC1-216ENST00000467134 SSH1Q8WYL5 1049 aa14.14□□□□□ -0.15
MUC1-216ENST00000467134 SMC4Q9NTJ3 1288 aa14.14□□□□□ -0.15
MUC1-216ENST00000467134 TNS2Q63HR2 1409 aa14.14□□□□□ -0.15
MUC1-216ENST00000467134 LAMB4A4D0S4 1761 aa14.14□□□□□ -0.15
MUC1-216ENST00000467134 TOGARAM1Q9Y4F4 1720 aa14.13□□□□□ -0.15
MUC1-216ENST00000467134 IPO8O15397 1037 aaKnown RBP14.13□□□□□ -0.15
MUC1-216ENST00000467134 C8orf58Q8NAV2 365 aa14.13□□□□□ -0.15
MUC1-216ENST00000467134 HEG1Q9ULI3 1381 aa14.12□□□□□ -0.15
MUC1-216ENST00000467134 CYP27B1O15528 508 aa14.12□□□□□ -0.15
MUC1-216ENST00000467134 ZKSCAN2Q63HK3 967 aa14.12□□□□□ -0.15
MUC1-216ENST00000467134 STRN4Q9NRL3 753 aa14.12□□□□□ -0.15
MUC1-216ENST00000467134 LGR6Q9HBX8 967 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms