RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 GGNBP2Q9H3C7 697 aa26.41■■□□□ 1.82
SRSF4-202ENST00000466448 PNPLA7Q6ZV29 1317 aa26.4■■□□□ 1.82
SRSF4-202ENST00000466448 DOT1LQ8TEK3 1739 aa26.4■■□□□ 1.82
SRSF4-202ENST00000466448 NBPF6Q5VWK0 638 aa26.4■■□□□ 1.82
SRSF4-202ENST00000466448 NBPF4Q96M43 638 aa26.4■■□□□ 1.82
SRSF4-202ENST00000466448 USP47Q96K76 1375 aa26.39■■□□□ 1.82
SRSF4-202ENST00000466448 TMF1P82094 1093 aa26.39■■□□□ 1.82
SRSF4-202ENST00000466448 SLC16A10Q8TF71 515 aa26.39■■□□□ 1.82
SRSF4-202ENST00000466448 SHANK3Q9BYB0 1731 aa26.39■■□□□ 1.81
SRSF4-202ENST00000466448 USHBP1Q8N6Y0 703 aa26.38■■□□□ 1.81
SRSF4-202ENST00000466448 ZNF784Q8NCA9 323 aaPredicted RBP26.38■■□□□ 1.81
SRSF4-202ENST00000466448 TFCP2L1Q9NZI6 479 aa26.38■■□□□ 1.81
SRSF4-202ENST00000466448 RGPD2P0DJD1 1756 aa26.37■■□□□ 1.81
SRSF4-202ENST00000466448 QSER1Q2KHR3 1735 aa26.35■■□□□ 1.81
SRSF4-202ENST00000466448 SMG6Q86US8 1419 aaKnown RBP26.35■■□□□ 1.81
SRSF4-202ENST00000466448 CGNL1Q0VF96 1302 aa26.35■■□□□ 1.81
SRSF4-202ENST00000466448 POLD1P28340 1107 aa26.34■■□□□ 1.81
SRSF4-202ENST00000466448 RAPGEF4Q8WZA2 1011 aa26.33■■□□□ 1.81
SRSF4-202ENST00000466448 CCNL1Q9UK58 526 aaPredicted RBP26.33■■□□□ 1.81
SRSF4-202ENST00000466448 LY75O60449 1722 aa26.33■■□□□ 1.81
SRSF4-202ENST00000466448 HSP90AB2PQ58FF8 381 aa26.32■■□□□ 1.8
SRSF4-202ENST00000466448 KLHL34Q8N239 644 aa26.32■■□□□ 1.8
SRSF4-202ENST00000466448 KAT6BQ8WYB5 2073 aa26.32■■□□□ 1.8
SRSF4-202ENST00000466448 INSRP06213 1382 aa26.32■■□□□ 1.8
SRSF4-202ENST00000466448 COL24A1Q17RW2 1714 aa26.3■■□□□ 1.8
SRSF4-202ENST00000466448 FLT4P35916 1363 aa26.3■■□□□ 1.8
SRSF4-202ENST00000466448 TATP17735 454 aaPredicted RBP26.29■■□□□ 1.8
SRSF4-202ENST00000466448 GPR162Q16538 588 aa26.29■■□□□ 1.8
SRSF4-202ENST00000466448 TUBGCP6Q96RT7 1819 aa26.29■■□□□ 1.8
SRSF4-202ENST00000466448 CDCA8Q53HL2 280 aa26.28■■□□□ 1.8
SRSF4-202ENST00000466448 PCDH11XQ9BZA7 1347 aa26.27■■□□□ 1.8
SRSF4-202ENST00000466448 PCDH11YQ9BZA8 1340 aa26.27■■□□□ 1.8
SRSF4-202ENST00000466448 KIF24Q5T7B8 1368 aa26.27■■□□□ 1.8
SRSF4-202ENST00000466448 CARD14Q9BXL6 1004 aa26.26■■□□□ 1.79
SRSF4-202ENST00000466448 COL23A1Q86Y22 540 aaPredicted RBP26.25■■□□□ 1.79
SRSF4-202ENST00000466448 KIF20BQ96Q89 1820 aa26.25■■□□□ 1.79
SRSF4-202ENST00000466448 NLGN2Q8NFZ4 835 aa26.24■■□□□ 1.79
SRSF4-202ENST00000466448 MSH5O43196 834 aa26.23■■□□□ 1.79
SRSF4-202ENST00000466448 TRIM26Q12899 539 aaPredicted RBP26.23■■□□□ 1.79
SRSF4-202ENST00000466448 EMILIN1Q9Y6C2 1016 aa26.23■■□□□ 1.79
SRSF4-202ENST00000466448 NSD3Q9BZ95 1437 aa26.22■■□□□ 1.79
SRSF4-202ENST00000466448 GOLGB1Q14789 3259 aaKnown RBP26.22■■□□□ 1.79
SRSF4-202ENST00000466448 CYP27B1O15528 508 aa26.22■■□□□ 1.79
SRSF4-202ENST00000466448 PELP1Q8IZL8 1130 aaKnown RBP26.22■■□□□ 1.79
SRSF4-202ENST00000466448 PALLDQ8WX93 1383 aa26.21■■□□□ 1.79
SRSF4-202ENST00000466448 MPRIPQ6WCQ1 1025 aa26.2■■□□□ 1.78
SRSF4-202ENST00000466448 CHD4Q14839 1912 aa26.18■■□□□ 1.78
SRSF4-202ENST00000466448 MSL1Q68DK7 614 aa26.18■■□□□ 1.78
SRSF4-202ENST00000466448 C5P01031 1676 aa26.18■■□□□ 1.78
SRSF4-202ENST00000466448 NCAPD2Q15021 1401 aa26.17■■□□□ 1.78
SRSF4-202ENST00000466448 PPM1GO15355 546 aaPredicted RBP26.16■■□□□ 1.78
SRSF4-202ENST00000466448 TOGARAM1Q9Y4F4 1720 aa26.15■■□□□ 1.78
SRSF4-202ENST00000466448 PKD1L3Q7Z443 1732 aa26.14■■□□□ 1.77
SRSF4-202ENST00000466448 YBX3P16989 372 aaKnown RBP eCLIP26.13■■□□□ 1.77
SRSF4-202ENST00000466448 WASHC2AQ641Q2 1341 aa26.13■■□□□ 1.77
SRSF4-202ENST00000466448 HMGB2P26583 209 aaKnown RBP26.12■■□□□ 1.77
SRSF4-202ENST00000466448 C1QTNF8P60827 252 aa26.12■■□□□ 1.77
SRSF4-202ENST00000466448 FLAD1Q8NFF5 587 aa26.12■■□□□ 1.77
SRSF4-202ENST00000466448 PIGBQ92521 554 aa26.12■■□□□ 1.77
SRSF4-202ENST00000466448 SMARCC1Q92922 1105 aaPredicted RBP26.12■■□□□ 1.77
SRSF4-202ENST00000466448 ANKRD26Q9UPS8 1709 aa26.11■■□□□ 1.77
SRSF4-202ENST00000466448 NKX1-1Q15270 411 aaPredicted RBP26.11■■□□□ 1.77
SRSF4-202ENST00000466448 AMIGO3Q86WK7 504 aa26.1■■□□□ 1.77
SRSF4-202ENST00000466448 EYA1Q99502 592 aa26.1■■□□□ 1.77
SRSF4-202ENST00000466448 SPG7Q9UQ90 795 aa26.1■■□□□ 1.77
SRSF4-202ENST00000466448 C4BP0C0L5 1744 aa26.09■■□□□ 1.77
SRSF4-202ENST00000466448 TIMELESSQ9UNS1 1208 aa26.09■■□□□ 1.77
SRSF4-202ENST00000466448 GRIN3BO60391 1043 aa26.08■■□□□ 1.77
SRSF4-202ENST00000466448 AK7Q96M32 723 aa26.08■■□□□ 1.77
SRSF4-202ENST00000466448 TAF1LQ8IZX4 1826 aa26.07■■□□□ 1.76
SRSF4-202ENST00000466448 SENP3-EIF4A1A0A087X0R7 540 aa26.07■■□□□ 1.76
SRSF4-202ENST00000466448 POLKQ9UBT6 870 aa26.07■■□□□ 1.76
SRSF4-202ENST00000466448 CD2APQ9Y5K6 639 aa26.07■■□□□ 1.76
SRSF4-202ENST00000466448 ITGB4P16144 1822 aa26.05■■□□□ 1.76
SRSF4-202ENST00000466448 PHF14O94880 888 aa26.05■■□□□ 1.76
SRSF4-202ENST00000466448 SMIM5Q71RC9 77 aa26.05■■□□□ 1.76
SRSF4-202ENST00000466448 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.05■■□□□ 1.767e-7■■□□□ 12.2
SRSF4-202ENST00000466448 GIGYF1O75420 1035 aaPredicted RBP26.04■■□□□ 1.76
SRSF4-202ENST00000466448 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.03■■□□□ 1.76
SRSF4-202ENST00000466448 LOC102724428A0A0B4J2F2 783 aa26.03■■□□□ 1.76
SRSF4-202ENST00000466448 SIK1P57059 783 aa26.03■■□□□ 1.76
SRSF4-202ENST00000466448 LINC00116Q8NCU8 138 aa26.03■■□□□ 1.76
SRSF4-202ENST00000466448 TMOD3Q9NYL9 352 aa26.03■■□□□ 1.76
SRSF4-202ENST00000466448 PHKG2P15735 406 aa26.02■■□□□ 1.76
SRSF4-202ENST00000466448 TNNT2P45379 298 aaPredicted RBP26.01■■□□□ 1.75
SRSF4-202ENST00000466448 IFNL2Q8IZJ0 200 aa26.01■■□□□ 1.75
SRSF4-202ENST00000466448 POLR3GLQ9BT43 218 aa26.01■■□□□ 1.75
SRSF4-202ENST00000466448 ASAP1Q9ULH1 1129 aa26.01■■□□□ 1.75
SRSF4-202ENST00000466448 EIF4A2Q14240 407 aaKnown RBP26■■□□□ 1.75
SRSF4-202ENST00000466448 SSFA2P28290 1259 aa25.99■■□□□ 1.75
SRSF4-202ENST00000466448 ITPK1Q13572 414 aa25.99■■□□□ 1.75
SRSF4-202ENST00000466448 MAP2P11137 1827 aaKnown RBP25.99■■□□□ 1.75
SRSF4-202ENST00000466448 UBR3Q6ZT12 1888 aa25.98■■□□□ 1.75
SRSF4-202ENST00000466448 CLSPNQ9HAW4 1339 aa25.97■■□□□ 1.75
SRSF4-202ENST00000466448 GNPATO15228 680 aa25.96■■□□□ 1.75
SRSF4-202ENST00000466448 ATP6V1AP38606 617 aa25.96■■□□□ 1.75
SRSF4-202ENST00000466448 PLEKHG2Q9H7P9 1386 aa25.95■■□□□ 1.75
SRSF4-202ENST00000466448 ATG3Q9NT62 314 aa25.95■■□□□ 1.74
SRSF4-202ENST00000466448 ATP10DQ9P241 1426 aa25.95■■□□□ 1.74
SRSF4-202ENST00000466448 IGSF1Q8N6C5 1336 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms