RNA–Protein interactions for RNA: ENST00000465352.1

ABCA4-203, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 1,048 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-203ENST00000465352 SLC15A2Q16348 729 aa19.73■□□□□ 0.75
ABCA4-203ENST00000465352 RGPD2P0DJD1 1756 aa19.72■□□□□ 0.75
ABCA4-203ENST00000465352 PPM1GO15355 546 aaPredicted RBP19.71■□□□□ 0.75
ABCA4-203ENST00000465352 USHBP1Q8N6Y0 703 aa19.71■□□□□ 0.75
ABCA4-203ENST00000465352 SYTL4Q96C24 671 aaPredicted RBP19.71■□□□□ 0.75
ABCA4-203ENST00000465352 EMILIN1Q9Y6C2 1016 aa19.71■□□□□ 0.75
ABCA4-203ENST00000465352 BTAF1O14981 1849 aa19.7■□□□□ 0.74
ABCA4-203ENST00000465352 PRIM1P49642 420 aaKnown RBP19.69■□□□□ 0.74
ABCA4-203ENST00000465352 MEGF6O75095 1541 aa19.69■□□□□ 0.74
ABCA4-203ENST00000465352 SLC27A3Q5K4L6 730 aa19.68■□□□□ 0.74
ABCA4-203ENST00000465352 WASHC2AQ641Q2 1341 aa19.67■□□□□ 0.74
ABCA4-203ENST00000465352 PCDH11XQ9BZA7 1347 aa19.67■□□□□ 0.74
ABCA4-203ENST00000465352 PCDH11YQ9BZA8 1340 aa19.67■□□□□ 0.74
ABCA4-203ENST00000465352 PANK3Q9H999 370 aa19.66■□□□□ 0.74
ABCA4-203ENST00000465352 MAP2P11137 1827 aaKnown RBP19.66■□□□□ 0.74
ABCA4-203ENST00000465352 DCAF8L1A6NGE4 600 aa19.65■□□□□ 0.74
ABCA4-203ENST00000465352 ZBTB7AO95365 584 aa19.64■□□□□ 0.73
ABCA4-203ENST00000465352 POLKQ9UBT6 870 aa19.64■□□□□ 0.73
ABCA4-203ENST00000465352 CASZ1Q86V15 1759 aa19.63■□□□□ 0.73
ABCA4-203ENST00000465352 HMGB2P26583 209 aaKnown RBP19.63■□□□□ 0.73
ABCA4-203ENST00000465352 TNNT2P45379 298 aaPredicted RBP19.63■□□□□ 0.73
ABCA4-203ENST00000465352 NSD2O96028 1365 aa19.62■□□□□ 0.73
ABCA4-203ENST00000465352 PDGFDQ9GZP0 370 aaPredicted RBP19.62■□□□□ 0.73
ABCA4-203ENST00000465352 MTFR1LQ9H019 292 aa19.62■□□□□ 0.73
ABCA4-203ENST00000465352 LRRC4BQ9NT99 713 aa19.62■□□□□ 0.73
ABCA4-203ENST00000465352 SPG7Q9UQ90 795 aa19.62■□□□□ 0.73
ABCA4-203ENST00000465352 ATF5Q9Y2D1 282 aaPredicted RBP19.62■□□□□ 0.73
ABCA4-203ENST00000465352 DOT1LQ8TEK3 1739 aa19.62■□□□□ 0.73
ABCA4-203ENST00000465352 SHANK3Q9BYB0 1731 aa19.61■□□□□ 0.73
ABCA4-203ENST00000465352 ANKRD26Q9UPS8 1709 aa19.6■□□□□ 0.73
ABCA4-203ENST00000465352 EYA1Q99502 592 aa19.6■□□□□ 0.73
ABCA4-203ENST00000465352 KNSTRNQ9Y448 316 aa19.6■□□□□ 0.73
ABCA4-203ENST00000465352 MORC1Q86VD1 984 aa19.59■□□□□ 0.73
ABCA4-203ENST00000465352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.59■□□□□ 0.73
ABCA4-203ENST00000465352 CCNL1Q9UK58 526 aaPredicted RBP19.59■□□□□ 0.73
ABCA4-203ENST00000465352 PAPPAQ13219 1627 aa19.58■□□□□ 0.73
ABCA4-203ENST00000465352 CYP27B1O15528 508 aa19.58■□□□□ 0.72
ABCA4-203ENST00000465352 ZNF827Q17R98 1081 aa19.58■□□□□ 0.72
ABCA4-203ENST00000465352 TFCP2L1Q9NZI6 479 aa19.58■□□□□ 0.72
ABCA4-203ENST00000465352 NCAPD2Q15021 1401 aa19.58■□□□□ 0.72
ABCA4-203ENST00000465352 PTGER2P43116 358 aa19.57■□□□□ 0.72
ABCA4-203ENST00000465352 SLC16A10Q8TF71 515 aa19.57■□□□□ 0.72
ABCA4-203ENST00000465352 AKT1S1Q96B36 256 aa19.57■□□□□ 0.72
ABCA4-203ENST00000465352 EIF4A2Q14240 407 aaKnown RBP19.56■□□□□ 0.72
ABCA4-203ENST00000465352 MPRIPQ6WCQ1 1025 aa19.56■□□□□ 0.72
ABCA4-203ENST00000465352 SMARCC1Q92922 1105 aaPredicted RBP19.56■□□□□ 0.72
ABCA4-203ENST00000465352 KCNQ4P56696 695 aa19.54■□□□□ 0.72
ABCA4-203ENST00000465352 NKX1-1Q15270 411 aaPredicted RBP19.54■□□□□ 0.72
ABCA4-203ENST00000465352 LY75O60449 1722 aa19.54■□□□□ 0.72
ABCA4-203ENST00000465352 IFNL2Q8IZJ0 200 aa19.53■□□□□ 0.72
ABCA4-203ENST00000465352 PKD1L3Q7Z443 1732 aa19.53■□□□□ 0.72
ABCA4-203ENST00000465352 ARXQ96QS3 562 aa19.52■□□□□ 0.72
ABCA4-203ENST00000465352 PLEKHG2Q9H7P9 1386 aa19.52■□□□□ 0.72
ABCA4-203ENST00000465352 POLD1P28340 1107 aa19.51■□□□□ 0.71
ABCA4-203ENST00000465352 PALLDQ8WX93 1383 aa19.51■□□□□ 0.71
ABCA4-203ENST00000465352 QSER1Q2KHR3 1735 aa19.51■□□□□ 0.71
ABCA4-203ENST00000465352 KIF7Q2M1P5 1343 aa19.51■□□□□ 0.71
ABCA4-203ENST00000465352 PNPLA7Q6ZV29 1317 aa19.51■□□□□ 0.71
ABCA4-203ENST00000465352 IGSF1Q8N6C5 1336 aa19.51■□□□□ 0.71
ABCA4-203ENST00000465352 SGIP1Q9BQI5 828 aa19.5■□□□□ 0.71
ABCA4-203ENST00000465352 MSH5O43196 834 aa19.49■□□□□ 0.71
ABCA4-203ENST00000465352 PHKG2P15735 406 aa19.49■□□□□ 0.71
ABCA4-203ENST00000465352 PLEKHO1Q53GL0 409 aaPredicted RBP19.49■□□□□ 0.71
ABCA4-203ENST00000465352 SYT17Q9BSW7 474 aa19.49■□□□□ 0.71
ABCA4-203ENST00000465352 FHDC1Q9C0D6 1143 aaPredicted RBP19.49■□□□□ 0.71
ABCA4-203ENST00000465352 TMOD3Q9NYL9 352 aa19.49■□□□□ 0.71
ABCA4-203ENST00000465352 ITGB4P16144 1822 aa19.48■□□□□ 0.71
ABCA4-203ENST00000465352 HSP90AB1P08238 724 aaKnown RBP19.48■□□□□ 0.71
ABCA4-203ENST00000465352 FLAD1Q8NFF5 587 aa19.48■□□□□ 0.71
ABCA4-203ENST00000465352 PIGBQ92521 554 aa19.48■□□□□ 0.71
ABCA4-203ENST00000465352 AMOTQ4VCS5 1084 aa19.46■□□□□ 0.71
ABCA4-203ENST00000465352 AMER1Q5JTC6 1135 aaPredicted RBP19.46■□□□□ 0.71
ABCA4-203ENST00000465352 YY1P25490 414 aa19.44■□□□□ 0.7
ABCA4-203ENST00000465352 AK7Q96M32 723 aa19.44■□□□□ 0.7
ABCA4-203ENST00000465352 TOGARAM1Q9Y4F4 1720 aa19.44■□□□□ 0.7
ABCA4-203ENST00000465352 MAP3K5Q99683 1374 aa19.44■□□□□ 0.7
ABCA4-203ENST00000465352 ERVV-2B6SEH9 535 aa19.43■□□□□ 0.7
ABCA4-203ENST00000465352 ZNF530Q6P9A1 599 aaPredicted RBP19.43■□□□□ 0.7
ABCA4-203ENST00000465352 DCAF5Q96JK2 942 aa19.43■□□□□ 0.7
ABCA4-203ENST00000465352 TUBGCP6Q96RT7 1819 aa19.43■□□□□ 0.7
ABCA4-203ENST00000465352 LOC102724428A0A0B4J2F2 783 aa19.42■□□□□ 0.7
ABCA4-203ENST00000465352 SIK1P57059 783 aa19.42■□□□□ 0.7
ABCA4-203ENST00000465352 C1orf141Q5JVX7 400 aa19.42■□□□□ 0.7
ABCA4-203ENST00000465352 COL23A1Q86Y22 540 aaPredicted RBP19.42■□□□□ 0.7
ABCA4-203ENST00000465352 KLHL34Q8N239 644 aa19.42■□□□□ 0.7
ABCA4-203ENST00000465352 C5P01031 1676 aa19.42■□□□□ 0.7
ABCA4-203ENST00000465352 SULT6B1Q6IMI4 303 aa19.41■□□□□ 0.7
ABCA4-203ENST00000465352 TAF1LQ8IZX4 1826 aa19.41■□□□□ 0.7
ABCA4-203ENST00000465352 PER1O15534 1290 aaPredicted RBP19.4■□□□□ 0.7
ABCA4-203ENST00000465352 IL13P35225 146 aa19.4■□□□□ 0.7
ABCA4-203ENST00000465352 ASAP1Q9ULH1 1129 aa19.4■□□□□ 0.7
ABCA4-203ENST00000465352 MTHFSP49914 203 aa19.39■□□□□ 0.69
ABCA4-203ENST00000465352 ATP6V1AP38606 617 aa19.38■□□□□ 0.69
ABCA4-203ENST00000465352 CABP4P57796 275 aa19.38■□□□□ 0.69
ABCA4-203ENST00000465352 CC2D1BQ5T0F9 858 aaKnown RBP19.38■□□□□ 0.69
ABCA4-203ENST00000465352 AEBP1Q8IUX7 1158 aa19.38■□□□□ 0.69
ABCA4-203ENST00000465352 COL24A1Q17RW2 1714 aa19.37■□□□□ 0.69
ABCA4-203ENST00000465352 ATG3Q9NT62 314 aa19.37■□□□□ 0.69
ABCA4-203ENST00000465352 C4BP0C0L5 1744 aa19.37■□□□□ 0.69
ABCA4-203ENST00000465352 KDRP35968 1356 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms