RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 CGNL1Q0VF96 1302 aa20.63■□□□□ 0.89
MRPL55-225ENST00000465268 PPM1GO15355 546 aaPredicted RBP20.63■□□□□ 0.89
MRPL55-225ENST00000465268 ZBTB7AO95365 584 aa20.63■□□□□ 0.89
MRPL55-225ENST00000465268 PANK3Q9H999 370 aa20.63■□□□□ 0.89
MRPL55-225ENST00000465268 STK32BQ9NY57 414 aa20.63■□□□□ 0.89
MRPL55-225ENST00000465268 POLKQ9UBT6 870 aa20.63■□□□□ 0.89
MRPL55-225ENST00000465268 KIF20BQ96Q89 1820 aa20.62■□□□□ 0.89
MRPL55-225ENST00000465268 KCNQ4P56696 695 aa20.62■□□□□ 0.89
MRPL55-225ENST00000465268 ZNF827Q17R98 1081 aa20.62■□□□□ 0.89
MRPL55-225ENST00000465268 SYTL4Q96C24 671 aaPredicted RBP20.62■□□□□ 0.89
MRPL55-225ENST00000465268 SMG6Q86US8 1419 aaKnown RBP20.61■□□□□ 0.89
MRPL55-225ENST00000465268 KIF24Q5T7B8 1368 aa20.61■□□□□ 0.89
MRPL55-225ENST00000465268 TNNT2P45379 298 aaPredicted RBP20.61■□□□□ 0.89
MRPL55-225ENST00000465268 RAPGEF4Q8WZA2 1011 aa20.6■□□□□ 0.89
MRPL55-225ENST00000465268 WASHC2AQ641Q2 1341 aa20.59■□□□□ 0.89
MRPL55-225ENST00000465268 TATP17735 454 aaPredicted RBP20.59■□□□□ 0.89
MRPL55-225ENST00000465268 ATF5Q9Y2D1 282 aaPredicted RBP20.59■□□□□ 0.89
MRPL55-225ENST00000465268 PTGER2P43116 358 aa20.58■□□□□ 0.89
MRPL55-225ENST00000465268 CASZ1Q86V15 1759 aa20.58■□□□□ 0.89
MRPL55-225ENST00000465268 SHANK3Q9BYB0 1731 aa20.58■□□□□ 0.88
MRPL55-225ENST00000465268 BTAF1O14981 1849 aa20.57■□□□□ 0.88
MRPL55-225ENST00000465268 CYP27B1O15528 508 aa20.57■□□□□ 0.88
MRPL55-225ENST00000465268 EYA1Q99502 592 aa20.57■□□□□ 0.88
MRPL55-225ENST00000465268 PAPPAQ13219 1627 aa20.56■□□□□ 0.88
MRPL55-225ENST00000465268 AKT1S1Q96B36 256 aa20.56■□□□□ 0.88
MRPL55-225ENST00000465268 PPP1R1BQ9UD71 204 aaPredicted RBP20.56■□□□□ 0.88
MRPL55-225ENST00000465268 NCAPD2Q15021 1401 aa20.55■□□□□ 0.88
MRPL55-225ENST00000465268 EIF4A2Q14240 407 aaKnown RBP20.53■□□□□ 0.88
MRPL55-225ENST00000465268 SLC27A3Q5K4L6 730 aa20.53■□□□□ 0.88
MRPL55-225ENST00000465268 SGIP1Q9BQI5 828 aa20.53■□□□□ 0.88
MRPL55-225ENST00000465268 PCDH11XQ9BZA7 1347 aa20.53■□□□□ 0.88
MRPL55-225ENST00000465268 PCDH11YQ9BZA8 1340 aa20.53■□□□□ 0.88
MRPL55-225ENST00000465268 DOT1LQ8TEK3 1739 aa20.52■□□□□ 0.88
MRPL55-225ENST00000465268 MTFR1LQ9H019 292 aa20.5■□□□□ 0.87
MRPL55-225ENST00000465268 KIF7Q2M1P5 1343 aa20.5■□□□□ 0.87
MRPL55-225ENST00000465268 CCNL1Q9UK58 526 aaPredicted RBP20.49■□□□□ 0.87
MRPL55-225ENST00000465268 ANKRD26Q9UPS8 1709 aa20.49■□□□□ 0.87
MRPL55-225ENST00000465268 PNPLA7Q6ZV29 1317 aa20.49■□□□□ 0.87
MRPL55-225ENST00000465268 MPRIPQ6WCQ1 1025 aa20.48■□□□□ 0.87
MRPL55-225ENST00000465268 NKX1-1Q15270 411 aaPredicted RBP20.47■□□□□ 0.87
MRPL55-225ENST00000465268 MORC1Q86VD1 984 aa20.46■□□□□ 0.87
MRPL55-225ENST00000465268 PIGBQ92521 554 aa20.46■□□□□ 0.87
MRPL55-225ENST00000465268 AMER1Q5JTC6 1135 aaPredicted RBP20.45■□□□□ 0.86
MRPL55-225ENST00000465268 FHDC1Q9C0D6 1143 aaPredicted RBP20.45■□□□□ 0.86
MRPL55-225ENST00000465268 TFCP2L1Q9NZI6 479 aa20.45■□□□□ 0.86
MRPL55-225ENST00000465268 KAT6BQ8WYB5 2073 aa20.44■□□□□ 0.86
MRPL55-225ENST00000465268 SPG7Q9UQ90 795 aa20.44■□□□□ 0.86
MRPL55-225ENST00000465268 KNSTRNQ9Y448 316 aa20.44■□□□□ 0.86
MRPL55-225ENST00000465268 IGSF1Q8N6C5 1336 aa20.44■□□□□ 0.86
MRPL55-225ENST00000465268 PHKG2P15735 406 aa20.43■□□□□ 0.86
MRPL55-225ENST00000465268 MAP2P11137 1827 aaKnown RBP20.43■□□□□ 0.86
MRPL55-225ENST00000465268 PALLDQ8WX93 1383 aa20.43■□□□□ 0.86
MRPL55-225ENST00000465268 TOGARAM1Q9Y4F4 1720 aa20.42■□□□□ 0.86
MRPL55-225ENST00000465268 AEBP1Q8IUX7 1158 aa20.42■□□□□ 0.86
MRPL55-225ENST00000465268 SYT17Q9BSW7 474 aa20.42■□□□□ 0.86
MRPL55-225ENST00000465268 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.42■□□□□ 0.86
MRPL55-225ENST00000465268 PKD1L3Q7Z443 1732 aa20.41■□□□□ 0.86
MRPL55-225ENST00000465268 AMIGO3Q86WK7 504 aa20.41■□□□□ 0.86
MRPL55-225ENST00000465268 COL23A1Q86Y22 540 aaPredicted RBP20.41■□□□□ 0.86
MRPL55-225ENST00000465268 ARXQ96QS3 562 aa20.41■□□□□ 0.86
MRPL55-225ENST00000465268 LY75O60449 1722 aa20.41■□□□□ 0.86
MRPL55-225ENST00000465268 PER1O15534 1290 aaPredicted RBP20.4■□□□□ 0.86
MRPL55-225ENST00000465268 SMIM5Q71RC9 77 aa20.4■□□□□ 0.86
MRPL55-225ENST00000465268 IFNL2Q8IZJ0 200 aa20.39■□□□□ 0.85
MRPL55-225ENST00000465268 UTRNP46939 3433 aa20.39■□□□□ 0.85
MRPL55-225ENST00000465268 IL13P35225 146 aa20.38■□□□□ 0.85
MRPL55-225ENST00000465268 ASAP1Q9ULH1 1129 aa20.38■□□□□ 0.85
MRPL55-225ENST00000465268 SLC16A10Q8TF71 515 aa20.37■□□□□ 0.85
MRPL55-225ENST00000465268 CC2D1BQ5T0F9 858 aaKnown RBP20.35■□□□□ 0.85
MRPL55-225ENST00000465268 SMARCC1Q92922 1105 aaPredicted RBP20.35■□□□□ 0.85
MRPL55-225ENST00000465268 ATG3Q9NT62 314 aa20.35■□□□□ 0.85
MRPL55-225ENST00000465268 TMOD3Q9NYL9 352 aa20.35■□□□□ 0.85
MRPL55-225ENST00000465268 MSH5O43196 834 aa20.34■□□□□ 0.85
MRPL55-225ENST00000465268 MSL1Q68DK7 614 aa20.34■□□□□ 0.85
MRPL55-225ENST00000465268 SULT6B1Q6IMI4 303 aa20.34■□□□□ 0.85
MRPL55-225ENST00000465268 LINC00116Q8NCU8 138 aa20.34■□□□□ 0.85
MRPL55-225ENST00000465268 TUBGCP6Q96RT7 1819 aa20.34■□□□□ 0.85
MRPL55-225ENST00000465268 LOC102724428A0A0B4J2F2 783 aa20.33■□□□□ 0.85
MRPL55-225ENST00000465268 MTHFSP49914 203 aa20.33■□□□□ 0.85
MRPL55-225ENST00000465268 SIK1P57059 783 aa20.33■□□□□ 0.85
MRPL55-225ENST00000465268 ITPK1Q13572 414 aa20.33■□□□□ 0.85
MRPL55-225ENST00000465268 YY1P25490 414 aa20.32■□□□□ 0.84
MRPL55-225ENST00000465268 CNGB1Q14028 1251 aaPredicted RBP20.32■□□□□ 0.84
MRPL55-225ENST00000465268 PLEKHO1Q53GL0 409 aaPredicted RBP20.32■□□□□ 0.84
MRPL55-225ENST00000465268 ZNF530Q6P9A1 599 aaPredicted RBP20.32■□□□□ 0.84
MRPL55-225ENST00000465268 KDM6AO15550 1401 aaPredicted RBP20.31■□□□□ 0.84
MRPL55-225ENST00000465268 POLD1P28340 1107 aa20.31■□□□□ 0.84
MRPL55-225ENST00000465268 KLHL34Q8N239 644 aa20.31■□□□□ 0.84
MRPL55-225ENST00000465268 SLC4A9Q96Q91 983 aa20.31■□□□□ 0.84
MRPL55-225ENST00000465268 MAP3K5Q99683 1374 aa20.31■□□□□ 0.84
MRPL55-225ENST00000465268 QSER1Q2KHR3 1735 aa20.3■□□□□ 0.84
MRPL55-225ENST00000465268 PLEKHG2Q9H7P9 1386 aa20.3■□□□□ 0.84
MRPL55-225ENST00000465268 ITGB4P16144 1822 aa20.3■□□□□ 0.84
MRPL55-225ENST00000465268 PHF14O94880 888 aa20.29■□□□□ 0.84
MRPL55-225ENST00000465268 NLGN2Q8NFZ4 835 aa20.29■□□□□ 0.84
MRPL55-225ENST00000465268 DCAF5Q96JK2 942 aa20.29■□□□□ 0.84
MRPL55-225ENST00000465268 KDRP35968 1356 aa20.29■□□□□ 0.84
MRPL55-225ENST00000465268 DCAF8L1A6NGE4 600 aa20.28■□□□□ 0.84
MRPL55-225ENST00000465268 ERVV-2B6SEH9 535 aa20.28■□□□□ 0.84
MRPL55-225ENST00000465268 AMOTQ4VCS5 1084 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms