RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 MARCH10Q8NA82 808 aaPredicted RBP15.96■□□□□ 0.15
APTX-213ENST00000465003 NCAPD2Q15021 1401 aa15.95■□□□□ 0.14
APTX-213ENST00000465003 EXOC5O00471 708 aa15.95■□□□□ 0.14
APTX-213ENST00000465003 OVOS2A0A0G2JMS6 1433 aa15.95■□□□□ 0.14
APTX-213ENST00000465003 TATP17735 454 aaPredicted RBP15.95■□□□□ 0.14
APTX-213ENST00000465003 U2AF1L5P0DN76 240 aaPredicted RBP15.93■□□□□ 0.14
APTX-213ENST00000465003 U2AF1Q01081 240 aaKnown RBP eCLIP15.93■□□□□ 0.142e-8■■■■■ 37
APTX-213ENST00000465003 PTF1AQ7RTS3 328 aa15.93■□□□□ 0.14
APTX-213ENST00000465003 ZCRB1Q8TBF4 217 aaKnown RBP15.93■□□□□ 0.14
APTX-213ENST00000465003 ACSBG1Q96GR2 724 aa15.92■□□□□ 0.14
APTX-213ENST00000465003 CDCA7Q9BWT1 371 aaPredicted RBP15.92■□□□□ 0.14
APTX-213ENST00000465003 KAT6BQ8WYB5 2073 aa15.92■□□□□ 0.14
APTX-213ENST00000465003 KDRP35968 1356 aa15.91■□□□□ 0.14
APTX-213ENST00000465003 PKD1L3Q7Z443 1732 aa15.91■□□□□ 0.14
APTX-213ENST00000465003 CYP27B1O15528 508 aa15.9■□□□□ 0.14
APTX-213ENST00000465003 TRIM37O94972 964 aa15.9■□□□□ 0.14
APTX-213ENST00000465003 SENP3-EIF4A1A0A087X0R7 540 aa15.89■□□□□ 0.13
APTX-213ENST00000465003 PRKAR2BP31323 418 aa15.89■□□□□ 0.13
APTX-213ENST00000465003 DIEXFQ68CQ4 756 aaKnown RBP15.89■□□□□ 0.13
APTX-213ENST00000465003 NUDCQ9Y266 331 aa15.89■□□□□ 0.13
APTX-213ENST00000465003 KCNQ2O43526 872 aa15.88■□□□□ 0.13
APTX-213ENST00000465003 RSPH6AQ9H0K4 717 aa15.88■□□□□ 0.13
APTX-213ENST00000465003 UPF1Q92900 1129 aaKnown RBP eCLIP15.87■□□□□ 0.13
APTX-213ENST00000465003 PHACTR3Q96KR7 559 aa15.87■□□□□ 0.13
APTX-213ENST00000465003 PCDH11XQ9BZA7 1347 aa15.87■□□□□ 0.13
APTX-213ENST00000465003 PCDH11YQ9BZA8 1340 aa15.87■□□□□ 0.13
APTX-213ENST00000465003 SBF2Q86WG5 1849 aa15.87■□□□□ 0.13
APTX-213ENST00000465003 DOT1LQ8TEK3 1739 aa15.87■□□□□ 0.13
APTX-213ENST00000465003 ZNF530Q6P9A1 599 aaPredicted RBP15.86■□□□□ 0.13
APTX-213ENST00000465003 FAM196AQ6ZSG2 479 aa15.86■□□□□ 0.13
APTX-213ENST00000465003 CCDC146Q8IYE0 955 aa15.86■□□□□ 0.13
APTX-213ENST00000465003 SYTL4Q96C24 671 aaPredicted RBP15.86■□□□□ 0.13
APTX-213ENST00000465003 MRS2Q9HD23 443 aa15.86■□□□□ 0.13
APTX-213ENST00000465003 TOGARAM1Q9Y4F4 1720 aa15.86■□□□□ 0.13
APTX-213ENST00000465003 MTHFSDQ2M296 383 aaKnown RBP15.86■□□□□ 0.13
APTX-213ENST00000465003 SPG7Q9UQ90 795 aa15.86■□□□□ 0.13
APTX-213ENST00000465003 SOCS7O14512 581 aa15.85■□□□□ 0.13
APTX-213ENST00000465003 PHKG2P15735 406 aa15.84■□□□□ 0.13
APTX-213ENST00000465003 DEFB132Q7Z7B7 95 aa15.84■□□□□ 0.13
APTX-213ENST00000465003 TNS1Q9HBL0 1735 aaKnown RBP15.84■□□□□ 0.13
APTX-213ENST00000465003 PLEKHO1Q53GL0 409 aaPredicted RBP15.84■□□□□ 0.13
APTX-213ENST00000465003 ADAMTS8Q9UP79 889 aa15.84■□□□□ 0.13
APTX-213ENST00000465003 WDR43Q15061 677 aaKnown RBP eCLIP15.83■□□□□ 0.12
APTX-213ENST00000465003 MPRIPQ6WCQ1 1025 aa15.83■□□□□ 0.12
APTX-213ENST00000465003 PRIM1P49642 420 aaKnown RBP15.82■□□□□ 0.12
APTX-213ENST00000465003 MIER1Q8N108 512 aa15.82■□□□□ 0.12
APTX-213ENST00000465003 IFNL2Q8IZJ0 200 aa15.81■□□□□ 0.12
APTX-213ENST00000465003 KDM6AO15550 1401 aaPredicted RBP15.81■□□□□ 0.12
APTX-213ENST00000465003 FCHSD2O94868 740 aa15.8■□□□□ 0.12
APTX-213ENST00000465003 AMOTQ4VCS5 1084 aa15.8■□□□□ 0.12
APTX-213ENST00000465003 C1orf141Q5JVX7 400 aa15.8■□□□□ 0.12
APTX-213ENST00000465003 NHSQ6T4R5 1651 aa15.8■□□□□ 0.12
APTX-213ENST00000465003 PLEKHF1Q96S99 279 aa15.8■□□□□ 0.12
APTX-213ENST00000465003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.8■□□□□ 0.121e-6■□□□□ 10.8
APTX-213ENST00000465003 EN1Q05925 392 aaPredicted RBP15.8■□□□□ 0.12
APTX-213ENST00000465003 RRP7AQ9Y3A4 280 aaKnown RBP15.8■□□□□ 0.12
APTX-213ENST00000465003 VIRMAQ69YN4 1812 aaKnown RBP15.79■□□□□ 0.12
APTX-213ENST00000465003 APBA3O96018 575 aa15.79■□□□□ 0.12
APTX-213ENST00000465003 LGR6Q9HBX8 967 aa15.79■□□□□ 0.12
APTX-213ENST00000465003 BTAF1O14981 1849 aa15.79■□□□□ 0.12
APTX-213ENST00000465003 ITGB4P16144 1822 aa15.79■□□□□ 0.12
APTX-213ENST00000465003 FAM9BQ8IZU0 186 aa15.78■□□□□ 0.12
APTX-213ENST00000465003 SF3B2Q13435 895 aaKnown RBP15.78■□□□□ 0.12
APTX-213ENST00000465003 DCTN1Q14203 1278 aa15.78■□□□□ 0.12
APTX-213ENST00000465003 NEUROD2Q15784 382 aa15.78■□□□□ 0.12
APTX-213ENST00000465003 DLG5Q8TDM6 1919 aa15.77■□□□□ 0.12
APTX-213ENST00000465003 BCL9O00512 1426 aa15.77■□□□□ 0.11
APTX-213ENST00000465003 MAPK8IP3Q9UPT6 1336 aa15.77■□□□□ 0.11
APTX-213ENST00000465003 KCNQ4P56696 695 aa15.76■□□□□ 0.11
APTX-213ENST00000465003 AKAP4Q5JQC9 854 aa15.76■□□□□ 0.11
APTX-213ENST00000465003 PNISRQ8TF01 805 aaKnown RBP15.76■□□□□ 0.11
APTX-213ENST00000465003 BCL11BQ9C0K0 894 aaPredicted RBP15.76■□□□□ 0.11
APTX-213ENST00000465003 SRCAPQ6ZRS2 3230 aa15.76■□□□□ 0.11
APTX-213ENST00000465003 NKX1-1Q15270 411 aaPredicted RBP15.76■□□□□ 0.11
APTX-213ENST00000465003 EZH2Q15910 746 aaKnown RBP15.76■□□□□ 0.11
APTX-213ENST00000465003 MCM10Q7L590 875 aa15.76■□□□□ 0.11
APTX-213ENST00000465003 SCN11AQ9UI33 1791 aa15.75■□□□□ 0.11
APTX-213ENST00000465003 PIGBQ92521 554 aa15.75■□□□□ 0.11
APTX-213ENST00000465003 THUMPD2Q9BTF0 503 aaKnown RBP15.75■□□□□ 0.11
APTX-213ENST00000465003 MAP3K5Q99683 1374 aa15.75■□□□□ 0.11
APTX-213ENST00000465003 GAS2L2Q8NHY3 880 aa15.75■□□□□ 0.11
APTX-213ENST00000465003 DCAF5Q96JK2 942 aa15.75■□□□□ 0.11
APTX-213ENST00000465003 GNAT3A8MTJ3 354 aa15.74■□□□□ 0.11
APTX-213ENST00000465003 RNMTO43148 476 aaKnown RBP15.73■□□□□ 0.11
APTX-213ENST00000465003 NEFMP07197 916 aa15.73■□□□□ 0.11
APTX-213ENST00000465003 NFATC2IPQ8NCF5 419 aa15.73■□□□□ 0.11
APTX-213ENST00000465003 IL17REQ8NFR9 667 aa15.73■□□□□ 0.11
APTX-213ENST00000465003 TMOD3Q9NYL9 352 aa15.73■□□□□ 0.11
APTX-213ENST00000465003 BAG6P46379 1132 aa15.73■□□□□ 0.11
APTX-213ENST00000465003 PLEKHG2Q9H7P9 1386 aa15.72■□□□□ 0.11
APTX-213ENST00000465003 CABP4P57796 275 aa15.72■□□□□ 0.11
APTX-213ENST00000465003 ASAP1Q9ULH1 1129 aa15.72■□□□□ 0.11
APTX-213ENST00000465003 APAF1O14727 1248 aa15.71■□□□□ 0.11
APTX-213ENST00000465003 HSP90AB1P08238 724 aaKnown RBP15.71■□□□□ 0.11
APTX-213ENST00000465003 NFE2L2Q16236 605 aa15.71■□□□□ 0.11
APTX-213ENST00000465003 RUNDC1Q96C34 613 aa15.71■□□□□ 0.11
APTX-213ENST00000465003 SALL2Q9Y467 1007 aaPredicted RBP15.71■□□□□ 0.11
APTX-213ENST00000465003 TMPOP42166 694 aaKnown RBP15.7■□□□□ 0.1
APTX-213ENST00000465003 RIPK4P57078 832 aa15.7■□□□□ 0.1
APTX-213ENST00000465003 SLC39A6Q13433 755 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms