RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 C22orf23Q9BZE7 217 aa23.51■■□□□ 1.35
TSPAN4-210ENST00000464987 ARHGEF10O15013 1369 aa23.51■■□□□ 1.35
TSPAN4-210ENST00000464987 RGS12O14924 1447 aa23.5■■□□□ 1.35
TSPAN4-210ENST00000464987 EYA1Q99502 592 aa23.5■■□□□ 1.35
TSPAN4-210ENST00000464987 AMPHP49418 695 aa23.49■■□□□ 1.35
TSPAN4-210ENST00000464987 GCC1Q96CN9 775 aa23.49■■□□□ 1.35
TSPAN4-210ENST00000464987 CHMP4BQ9H444 224 aaKnown RBP23.49■■□□□ 1.35
TSPAN4-210ENST00000464987 NLRP6P59044 892 aa23.48■■□□□ 1.35
TSPAN4-210ENST00000464987 RBM33Q96EV2 1170 aaKnown RBP23.46■■□□□ 1.35
TSPAN4-210ENST00000464987 KDRP35968 1356 aa23.46■■□□□ 1.35
TSPAN4-210ENST00000464987 KIAA0232Q92628 1395 aa23.46■■□□□ 1.35
TSPAN4-210ENST00000464987 ANTXR1Q9H6X2 564 aa23.45■■□□□ 1.35
TSPAN4-210ENST00000464987 IGSF1Q8N6C5 1336 aa23.45■■□□□ 1.34
TSPAN4-210ENST00000464987 INTS3Q68E01 1043 aaKnown RBP23.45■■□□□ 1.34
TSPAN4-210ENST00000464987 SPRYD3Q8NCJ5 442 aa23.45■■□□□ 1.34
TSPAN4-210ENST00000464987 SETD1BQ9UPS6 1966 aaKnown RBP23.44■■□□□ 1.34
TSPAN4-210ENST00000464987 BMP2KLQ5H9B9 411 aa23.43■■□□□ 1.34
TSPAN4-210ENST00000464987 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
TSPAN4-210ENST00000464987 MSH6P52701 1360 aa23.42■■□□□ 1.34
TSPAN4-210ENST00000464987 RTF1Q92541 710 aaKnown RBP23.42■■□□□ 1.34
TSPAN4-210ENST00000464987 ANKARQ7Z5J8 1434 aa23.42■■□□□ 1.34
TSPAN4-210ENST00000464987 SLC4A2P04920 1241 aa23.41■■□□□ 1.34
TSPAN4-210ENST00000464987 TSPYL4Q9UJ04 414 aa23.41■■□□□ 1.34
TSPAN4-210ENST00000464987 KIF24Q5T7B8 1368 aa23.41■■□□□ 1.34
TSPAN4-210ENST00000464987 HOXC9P31274 260 aa23.41■■□□□ 1.34
TSPAN4-210ENST00000464987 GSE1Q14687 1217 aa23.41■■□□□ 1.34
TSPAN4-210ENST00000464987 ABTB2Q8N961 1025 aa23.41■■□□□ 1.34
TSPAN4-210ENST00000464987 ATP10DQ9P241 1426 aa23.41■■□□□ 1.34
TSPAN4-210ENST00000464987 G2E3Q7L622 706 aa23.4■■□□□ 1.34
TSPAN4-210ENST00000464987 CHD2O14647 1828 aaKnown RBP23.4■■□□□ 1.34
TSPAN4-210ENST00000464987 NWD1Q149M9 1564 aa23.39■■□□□ 1.34
TSPAN4-210ENST00000464987 LTV1Q96GA3 475 aaPredicted RBP23.39■■□□□ 1.34
TSPAN4-210ENST00000464987 MEIS3Q99687 375 aa23.39■■□□□ 1.33
TSPAN4-210ENST00000464987 HAP1P54257 671 aaPredicted RBP23.37■■□□□ 1.33
TSPAN4-210ENST00000464987 DCTPP1Q9H773 170 aa23.37■■□□□ 1.33
TSPAN4-210ENST00000464987 PTPRCP08575 1304 aa23.37■■□□□ 1.33
TSPAN4-210ENST00000464987 C14orf37Q86TY3 774 aa23.37■■□□□ 1.33
TSPAN4-210ENST00000464987 GAS2L2Q8NHY3 880 aa23.37■■□□□ 1.33
TSPAN4-210ENST00000464987 LTN1O94822 1766 aa23.37■■□□□ 1.33
TSPAN4-210ENST00000464987 F6X3S4 739 aa23.36■■□□□ 1.33
TSPAN4-210ENST00000464987 C16orf71Q8IYS4 520 aaPredicted RBP23.36■■□□□ 1.33
TSPAN4-210ENST00000464987 USP54Q70EL1 1684 aa23.36■■□□□ 1.33
TSPAN4-210ENST00000464987 RTL1A6NKG5 1358 aa23.36■■□□□ 1.33
TSPAN4-210ENST00000464987 CEP85Q6P2H3 762 aa23.36■■□□□ 1.33
TSPAN4-210ENST00000464987 ANKRD44Q8N8A2 993 aa23.36■■□□□ 1.33
TSPAN4-210ENST00000464987 RBM25P49756 843 aaKnown RBP23.35■■□□□ 1.33
TSPAN4-210ENST00000464987 TBC1D9Q6ZT07 1266 aa23.35■■□□□ 1.33
TSPAN4-210ENST00000464987 LRRC37A3O60309 1634 aa23.35■■□□□ 1.33
TSPAN4-210ENST00000464987 GSPT1P15170 499 aaKnown RBP23.35■■□□□ 1.33
TSPAN4-210ENST00000464987 USHBP1Q8N6Y0 703 aa23.35■■□□□ 1.33
TSPAN4-210ENST00000464987 PLEKHM2Q8IWE5 1019 aa23.34■■□□□ 1.33
TSPAN4-210ENST00000464987 SLC4A10Q6U841 1118 aa23.33■■□□□ 1.33
TSPAN4-210ENST00000464987 OTUD7AQ8TE49 926 aaPredicted RBP23.32■■□□□ 1.32
TSPAN4-210ENST00000464987 PHF8Q9UPP1 1060 aa23.32■■□□□ 1.32
TSPAN4-210ENST00000464987 KDM4FA0A1W2PPD8 638 aa23.32■■□□□ 1.32
TSPAN4-210ENST00000464987 GNAT3A8MTJ3 354 aa23.32■■□□□ 1.32
TSPAN4-210ENST00000464987 NECTIN2Q92692 538 aa23.32■■□□□ 1.32
TSPAN4-210ENST00000464987 APBB1O00213 710 aa23.31■■□□□ 1.32
TSPAN4-210ENST00000464987 IL17REQ8NFR9 667 aa23.31■■□□□ 1.32
TSPAN4-210ENST00000464987 SMARCA5O60264 1052 aaPredicted RBP23.31■■□□□ 1.32
TSPAN4-210ENST00000464987 RPAP2Q8IXW5 612 aaPredicted RBP23.31■■□□□ 1.32
TSPAN4-210ENST00000464987 KIF2CQ99661 725 aa23.31■■□□□ 1.32
TSPAN4-210ENST00000464987 FAM208AQ9UK61 1670 aaKnown RBP23.3■■□□□ 1.32
TSPAN4-210ENST00000464987 ANKLE2Q86XL3 938 aa23.29■■□□□ 1.32
TSPAN4-210ENST00000464987 RGPD2P0DJD1 1756 aa23.29■■□□□ 1.32
TSPAN4-210ENST00000464987 HSCBQ8IWL3 235 aa23.27■■□□□ 1.32
TSPAN4-210ENST00000464987 HTATSF1O43719 755 aaKnown RBP23.27■■□□□ 1.31
TSPAN4-210ENST00000464987 MAP3K5Q99683 1374 aa23.26■■□□□ 1.31
TSPAN4-210ENST00000464987 TTC22Q5TAA0 569 aa23.25■■□□□ 1.31
TSPAN4-210ENST00000464987 ZNF142P52746 1687 aaPredicted RBP23.25■■□□□ 1.31
TSPAN4-210ENST00000464987 CDC45O75419 566 aa23.25■■□□□ 1.31
TSPAN4-210ENST00000464987 CD2BP2O95400 341 aaKnown RBP23.25■■□□□ 1.31
TSPAN4-210ENST00000464987 ESCO1Q5FWF5 840 aa23.25■■□□□ 1.31
TSPAN4-210ENST00000464987 CACNA1FO60840 1977 aa23.25■■□□□ 1.31
TSPAN4-210ENST00000464987 ZBTB7CA1YPR0 619 aa23.24■■□□□ 1.31
TSPAN4-210ENST00000464987 RBM42Q9BTD8 480 aaKnown RBP23.24■■□□□ 1.31
TSPAN4-210ENST00000464987 NFAT5O94916 1531 aa23.24■■□□□ 1.31
TSPAN4-210ENST00000464987 FLIIQ13045 1269 aa23.24■■□□□ 1.31
TSPAN4-210ENST00000464987 STK31Q9BXU1 1019 aa23.24■■□□□ 1.31
TSPAN4-210ENST00000464987 PLEKHG5O94827 1062 aa23.23■■□□□ 1.31
TSPAN4-210ENST00000464987 NBPF6Q5VWK0 638 aa23.23■■□□□ 1.31
TSPAN4-210ENST00000464987 NBPF4Q96M43 638 aa23.23■■□□□ 1.31
TSPAN4-210ENST00000464987 CCT4P50991 539 aaKnown RBP23.22■■□□□ 1.31
TSPAN4-210ENST00000464987 FKBP5Q13451 457 aaPredicted RBP23.22■■□□□ 1.31
TSPAN4-210ENST00000464987 SNX21Q969T3 373 aa23.22■■□□□ 1.31
TSPAN4-210ENST00000464987 PSME1Q06323 249 aa23.21■■□□□ 1.31
TSPAN4-210ENST00000464987 TAF7Q15545 349 aaPredicted RBP23.21■■□□□ 1.31
TSPAN4-210ENST00000464987 IL27Q8NEV9 243 aa23.21■■□□□ 1.31
TSPAN4-210ENST00000464987 IP6K1Q92551 441 aa23.21■■□□□ 1.31
TSPAN4-210ENST00000464987 CCDC30Q5VVM6 783 aa23.21■■□□□ 1.31
TSPAN4-210ENST00000464987 NCOA3Q9Y6Q9 1424 aa23.21■■□□□ 1.31
TSPAN4-210ENST00000464987 XPCQ01831 940 aaPredicted RBP23.2■■□□□ 1.3
TSPAN4-210ENST00000464987 CHMP5Q9NZZ3 219 aa23.2■■□□□ 1.3
TSPAN4-210ENST00000464987 ADGRL3Q9HAR2 1447 aa23.2■■□□□ 1.3
TSPAN4-210ENST00000464987 LRRC59Q96AG4 307 aaKnown RBP23.18■■□□□ 1.3
TSPAN4-210ENST00000464987 ORAI2Q96SN7 254 aa23.18■■□□□ 1.3
TSPAN4-210ENST00000464987 SDSP20132 328 aa23.18■■□□□ 1.3
TSPAN4-210ENST00000464987 LGR6Q9HBX8 967 aa23.18■■□□□ 1.3
TSPAN4-210ENST00000464987 DDIT3P35638 169 aa23.17■■□□□ 1.3
TSPAN4-210ENST00000464987 EXOC6BQ9Y2D4 811 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms