RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 ANKRD24Q8TF21 1146 aa12.01□□□□□ -0.49
NUDCD3-204ENST00000464812 LTV1Q96GA3 475 aaPredicted RBP12.01□□□□□ -0.49
NUDCD3-204ENST00000464812 NPM3O75607 178 aaKnown RBP12□□□□□ -0.49
NUDCD3-204ENST00000464812 AEBP1Q8IUX7 1158 aa12□□□□□ -0.49
NUDCD3-204ENST00000464812 ADAMTS8Q9UP79 889 aa12□□□□□ -0.49
NUDCD3-204ENST00000464812 KDRP35968 1356 aa12□□□□□ -0.49
NUDCD3-204ENST00000464812 U2SURPO15042 1029 aaKnown RBP11.99□□□□□ -0.49
NUDCD3-204ENST00000464812 WDR43Q15061 677 aaKnown RBP eCLIP11.99□□□□□ -0.49
NUDCD3-204ENST00000464812 PTF1AQ7RTS3 328 aa11.99□□□□□ -0.49
NUDCD3-204ENST00000464812 TCP11L2Q8N4U5 519 aa11.99□□□□□ -0.49
NUDCD3-204ENST00000464812 USHBP1Q8N6Y0 703 aa11.99□□□□□ -0.49
NUDCD3-204ENST00000464812 EYA1Q99502 592 aa11.99□□□□□ -0.49
NUDCD3-204ENST00000464812 MEGF6O75095 1541 aa11.99□□□□□ -0.49
NUDCD3-204ENST00000464812 SBF2Q86WG5 1849 aa11.98□□□□□ -0.49
NUDCD3-204ENST00000464812 SENP3-EIF4A1A0A087X0R7 540 aa11.98□□□□□ -0.49
NUDCD3-204ENST00000464812 HMOX1P09601 288 aa11.98□□□□□ -0.49
NUDCD3-204ENST00000464812 U2AF1L5P0DN76 240 aaPredicted RBP11.98□□□□□ -0.49
NUDCD3-204ENST00000464812 EVA1CP58658 441 aa11.98□□□□□ -0.49
NUDCD3-204ENST00000464812 U2AF1Q01081 240 aaKnown RBP eCLIP11.98□□□□□ -0.49
NUDCD3-204ENST00000464812 NBPF6Q5VWK0 638 aa11.98□□□□□ -0.49
NUDCD3-204ENST00000464812 KRT27Q7Z3Y8 459 aa11.98□□□□□ -0.49
NUDCD3-204ENST00000464812 NBPF4Q96M43 638 aa11.98□□□□□ -0.49
NUDCD3-204ENST00000464812 CARD10Q9BWT7 1032 aa11.98□□□□□ -0.49
NUDCD3-204ENST00000464812 RSPH6AQ9H0K4 717 aa11.98□□□□□ -0.49
NUDCD3-204ENST00000464812 TOM1L2Q6ZVM7 507 aa11.97□□□□□ -0.49
NUDCD3-204ENST00000464812 CCDC146Q8IYE0 955 aa11.97□□□□□ -0.49
NUDCD3-204ENST00000464812 SULT6B1Q6IMI4 303 aa11.96□□□□□ -0.49
NUDCD3-204ENST00000464812 MARCH10Q8NA82 808 aaPredicted RBP11.96□□□□□ -0.49
NUDCD3-204ENST00000464812 PLEKHF1Q96S99 279 aa11.96□□□□□ -0.49
NUDCD3-204ENST00000464812 DEFB132Q7Z7B7 95 aa11.95□□□□□ -0.5
NUDCD3-204ENST00000464812 NUDCQ9Y266 331 aa11.95□□□□□ -0.5
NUDCD3-204ENST00000464812 THRAP3Q9Y2W1 955 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-204ENST00000464812 PRKAR2BP31323 418 aa11.94□□□□□ -0.5
NUDCD3-204ENST00000464812 TNS2Q63HR2 1409 aa11.94□□□□□ -0.5
NUDCD3-204ENST00000464812 ADAMTS7Q9UKP4 1686 aa11.94□□□□□ -0.5
NUDCD3-204ENST00000464812 CSB-PGBD3P0DP91 1061 aa11.93□□□□□ -0.5
NUDCD3-204ENST00000464812 PHACTR3Q96KR7 559 aa11.93□□□□□ -0.5
NUDCD3-204ENST00000464812 YTHDC1Q96MU7 727 aaKnown RBP11.93□□□□□ -0.5
NUDCD3-204ENST00000464812 NLRP2Q9NX02 1062 aa11.93□□□□□ -0.5
NUDCD3-204ENST00000464812 TOGARAM1Q9Y4F4 1720 aa11.93□□□□□ -0.5
NUDCD3-204ENST00000464812 OVOS2A0A0G2JMS6 1433 aa11.93□□□□□ -0.5
NUDCD3-204ENST00000464812 A0A0G2JS52 829 aa11.92□□□□□ -0.5
NUDCD3-204ENST00000464812 MYT1Q01538 1121 aa11.92□□□□□ -0.5
NUDCD3-204ENST00000464812 SRCAPQ6ZRS2 3230 aa11.92□□□□□ -0.5
NUDCD3-204ENST00000464812 SCN11AQ9UI33 1791 aa11.92□□□□□ -0.5
NUDCD3-204ENST00000464812 FCHSD2O94868 740 aa11.91□□□□□ -0.5
NUDCD3-204ENST00000464812 RUNDC1Q96C34 613 aa11.91□□□□□ -0.5
NUDCD3-204ENST00000464812 SIPA1L3O60292 1781 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-204ENST00000464812 BCL9O00512 1426 aa11.9□□□□□ -0.5
NUDCD3-204ENST00000464812 APAF1O14727 1248 aa11.9□□□□□ -0.5
NUDCD3-204ENST00000464812 RRP7AQ9Y3A4 280 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-204ENST00000464812 RREB1Q92766 1687 aa11.9□□□□□ -0.5
NUDCD3-204ENST00000464812 HNRNPUQ00839 825 aaKnown RBP eCLIP11.89□□□□□ -0.51
NUDCD3-204ENST00000464812 DDB1Q16531 1140 aa11.89□□□□□ -0.51
NUDCD3-204ENST00000464812 DOT1LQ8TEK3 1739 aa11.89□□□□□ -0.51
NUDCD3-204ENST00000464812 NHSQ6T4R5 1651 aa11.88□□□□□ -0.51
NUDCD3-204ENST00000464812 KCNQ2O43526 872 aa11.88□□□□□ -0.51
NUDCD3-204ENST00000464812 TRIM37O94972 964 aa11.88□□□□□ -0.51
NUDCD3-204ENST00000464812 IL2RBP14784 551 aa11.88□□□□□ -0.51
NUDCD3-204ENST00000464812 NUP188Q5SRE5 1749 aa11.88□□□□□ -0.51
NUDCD3-204ENST00000464812 MAPK8IP3Q9UPT6 1336 aa11.87□□□□□ -0.51
NUDCD3-204ENST00000464812 TMPOP42166 694 aaKnown RBP11.87□□□□□ -0.51
NUDCD3-204ENST00000464812 MTHFSDQ2M296 383 aaKnown RBP11.87□□□□□ -0.51
NUDCD3-204ENST00000464812 CAMKK2Q96RR4 588 aa11.87□□□□□ -0.51
NUDCD3-204ENST00000464812 ITGB4P16144 1822 aa11.87□□□□□ -0.51
NUDCD3-204ENST00000464812 EN1Q05925 392 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-204ENST00000464812 PDE3BQ13370 1112 aa11.86□□□□□ -0.51
NUDCD3-204ENST00000464812 NFE2L2Q16236 605 aa11.86□□□□□ -0.51
NUDCD3-204ENST00000464812 FAM196AQ6ZSG2 479 aa11.86□□□□□ -0.51
NUDCD3-204ENST00000464812 PROM2Q8N271 834 aa11.86□□□□□ -0.51
NUDCD3-204ENST00000464812 SALL2Q9Y467 1007 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-204ENST00000464812 PLEKHG2Q9H7P9 1386 aa11.86□□□□□ -0.51
NUDCD3-204ENST00000464812 BTAF1O14981 1849 aa11.86□□□□□ -0.51
NUDCD3-204ENST00000464812 KDM6AO15550 1401 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-204ENST00000464812 ZNF521Q96K83 1311 aa11.86□□□□□ -0.51
NUDCD3-204ENST00000464812 KDM3BQ7LBC6 1761 aa11.85□□□□□ -0.51
NUDCD3-204ENST00000464812 MRC1P22897 1456 aa11.85□□□□□ -0.51
NUDCD3-204ENST00000464812 EZH2Q15910 746 aaKnown RBP11.85□□□□□ -0.51
NUDCD3-204ENST00000464812 RAPGEF4Q8WZA2 1011 aa11.85□□□□□ -0.51
NUDCD3-204ENST00000464812 CDCA7Q9BWT1 371 aaPredicted RBP11.85□□□□□ -0.51
NUDCD3-204ENST00000464812 TRIM35Q9UPQ4 493 aa11.85□□□□□ -0.51
NUDCD3-204ENST00000464812 ZBED9Q6R2W3 1325 aa11.85□□□□□ -0.51
NUDCD3-204ENST00000464812 MAP3K5Q99683 1374 aa11.84□□□□□ -0.51
NUDCD3-204ENST00000464812 EXOC5O00471 708 aa11.84□□□□□ -0.51
NUDCD3-204ENST00000464812 CYP27B1O15528 508 aa11.84□□□□□ -0.51
NUDCD3-204ENST00000464812 TATP17735 454 aaPredicted RBP11.84□□□□□ -0.51
NUDCD3-204ENST00000464812 NEUROD2Q15784 382 aa11.84□□□□□ -0.51
NUDCD3-204ENST00000464812 CCDC125Q86Z20 511 aa11.84□□□□□ -0.51
NUDCD3-204ENST00000464812 PNNQ9H307 717 aaKnown RBP11.84□□□□□ -0.51
NUDCD3-204ENST00000464812 PAPPAQ13219 1627 aa11.84□□□□□ -0.51
NUDCD3-204ENST00000464812 RGPD3A6NKT7 1758 aaPredicted RBP11.84□□□□□ -0.51
NUDCD3-204ENST00000464812 RGPD4Q7Z3J3 1758 aa11.84□□□□□ -0.51
NUDCD3-204ENST00000464812 ACSBG1Q96GR2 724 aa11.83□□□□□ -0.52
NUDCD3-204ENST00000464812 RIPK4P57078 832 aa11.82□□□□□ -0.52
NUDCD3-204ENST00000464812 DCTN1Q14203 1278 aa11.82□□□□□ -0.52
NUDCD3-204ENST00000464812 ZNF530Q6P9A1 599 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-204ENST00000464812 THUMPD2Q9BTF0 503 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-204ENST00000464812 CCDC27Q2M243 656 aa11.81□□□□□ -0.52
NUDCD3-204ENST00000464812 PLEKHO1Q53GL0 409 aaPredicted RBP11.81□□□□□ -0.52
NUDCD3-204ENST00000464812 WWC1Q8IX03 1113 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms