RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 RGPD4Q7Z3J3 1758 aa30.38■■■□□ 2.45
UBA3-206ENST00000464605 NHSQ6T4R5 1651 aa30.37■■■□□ 2.45
UBA3-206ENST00000464605 NCAPD2Q15021 1401 aa30.37■■■□□ 2.45
UBA3-206ENST00000464605 NUP188Q5SRE5 1749 aa30.36■■■□□ 2.45
UBA3-206ENST00000464605 MORC1Q86VD1 984 aa30.34■■■□□ 2.45
UBA3-206ENST00000464605 KCNQ2O43526 872 aa30.33■■■□□ 2.45
UBA3-206ENST00000464605 PLSCR1O15162 318 aa30.32■■■□□ 2.44
UBA3-206ENST00000464605 ZCRB1Q8TBF4 217 aaKnown RBP30.31■■■□□ 2.44
UBA3-206ENST00000464605 DDX54Q8TDD1 881 aaKnown RBP30.31■■■□□ 2.44
UBA3-206ENST00000464605 NBPF14Q5TI25 921 aa30.3■■■□□ 2.44
UBA3-206ENST00000464605 EYA1Q99502 592 aa30.3■■■□□ 2.44
UBA3-206ENST00000464605 BTAF1O14981 1849 aa30.3■■■□□ 2.44
UBA3-206ENST00000464605 EIF4A2Q14240 407 aaKnown RBP30.29■■■□□ 2.44
UBA3-206ENST00000464605 ACSBG1Q96GR2 724 aa30.29■■■□□ 2.44
UBA3-206ENST00000464605 RAPGEF4Q8WZA2 1011 aa30.28■■■□□ 2.44
UBA3-206ENST00000464605 PKD1L3Q7Z443 1732 aa30.27■■■□□ 2.44
UBA3-206ENST00000464605 TATP17735 454 aaPredicted RBP30.26■■■□□ 2.43
UBA3-206ENST00000464605 PROM2Q8N271 834 aa30.26■■■□□ 2.43
UBA3-206ENST00000464605 DOT1LQ8TEK3 1739 aa30.25■■■□□ 2.43
UBA3-206ENST00000464605 NPC1L1Q9UHC9 1359 aa30.24■■■□□ 2.43
UBA3-206ENST00000464605 CC2D1BQ5T0F9 858 aaKnown RBP30.22■■■□□ 2.43
UBA3-206ENST00000464605 IGSF1Q8N6C5 1336 aa30.2■■■□□ 2.42
UBA3-206ENST00000464605 CYP27B1O15528 508 aa30.18■■■□□ 2.42
UBA3-206ENST00000464605 ANO8Q9HCE9 1232 aaPredicted RBP30.17■■■□□ 2.42
UBA3-206ENST00000464605 TXNRD1Q16881 649 aa30.16■■■□□ 2.42
UBA3-206ENST00000464605 PCDH11XQ9BZA7 1347 aa30.16■■■□□ 2.42
UBA3-206ENST00000464605 PCDH11YQ9BZA8 1340 aa30.16■■■□□ 2.42
UBA3-206ENST00000464605 PRIM1P49642 420 aaKnown RBP30.15■■■□□ 2.42
UBA3-206ENST00000464605 TOGARAM1Q9Y4F4 1720 aa30.15■■■□□ 2.42
UBA3-206ENST00000464605 ITGB4P16144 1822 aa30.15■■■□□ 2.42
UBA3-206ENST00000464605 MTHFSP49914 203 aa30.14■■■□□ 2.42
UBA3-206ENST00000464605 IL13P35225 146 aa30.13■■■□□ 2.41
UBA3-206ENST00000464605 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.13■■■□□ 2.41
UBA3-206ENST00000464605 LY75O60449 1722 aa30.11■■■□□ 2.41
UBA3-206ENST00000464605 NKX1-1Q15270 411 aaPredicted RBP30.09■■■□□ 2.41
UBA3-206ENST00000464605 SYTL4Q96C24 671 aaPredicted RBP30.09■■■□□ 2.41
UBA3-206ENST00000464605 PLEKHG2Q9H7P9 1386 aa30.09■■■□□ 2.41
UBA3-206ENST00000464605 SPON1Q9HCB6 807 aa30.09■■■□□ 2.41
UBA3-206ENST00000464605 SPG7Q9UQ90 795 aa30.09■■■□□ 2.41
UBA3-206ENST00000464605 CNGB1Q14028 1251 aaPredicted RBP30.08■■■□□ 2.41
UBA3-206ENST00000464605 AEBP1Q8IUX7 1158 aa30.08■■■□□ 2.41
UBA3-206ENST00000464605 PAPPAQ13219 1627 aa30.07■■■□□ 2.4
UBA3-206ENST00000464605 KDRP35968 1356 aa30.05■■■□□ 2.4
UBA3-206ENST00000464605 LRRC4BQ9NT99 713 aa30.05■■■□□ 2.4
UBA3-206ENST00000464605 COL3A1P02461 1466 aaPredicted RBP30.04■■■□□ 2.4
UBA3-206ENST00000464605 PHKG2P15735 406 aa30.03■■■□□ 2.4
UBA3-206ENST00000464605 PDGFDQ9GZP0 370 aaPredicted RBP30.03■■■□□ 2.4
UBA3-206ENST00000464605 CASZ1Q86V15 1759 aa30.03■■■□□ 2.4
UBA3-206ENST00000464605 SULT6B1Q6IMI4 303 aa30.02■■■□□ 2.4
UBA3-206ENST00000464605 SLC15A2Q16348 729 aa30.01■■■□□ 2.39
UBA3-206ENST00000464605 IFNL2Q8IZJ0 200 aa30.01■■■□□ 2.39
UBA3-206ENST00000464605 STK32BQ9NY57 414 aa30.01■■■□□ 2.39
UBA3-206ENST00000464605 DIAPH1O60610 1272 aaKnown RBP29.97■■■□□ 2.39
UBA3-206ENST00000464605 PLEKHO1Q53GL0 409 aaPredicted RBP29.97■■■□□ 2.39
UBA3-206ENST00000464605 SLC27A3Q5K4L6 730 aa29.97■■■□□ 2.39
UBA3-206ENST00000464605 MPRIPQ6WCQ1 1025 aa29.97■■■□□ 2.39
UBA3-206ENST00000464605 PPP1R1BQ9UD71 204 aaPredicted RBP29.97■■■□□ 2.39
UBA3-206ENST00000464605 KCNQ4P56696 695 aa29.95■■■□□ 2.39
UBA3-206ENST00000464605 AMOTQ4VCS5 1084 aa29.95■■■□□ 2.39
UBA3-206ENST00000464605 PIGBQ92521 554 aa29.95■■■□□ 2.39
UBA3-206ENST00000464605 TAF1LQ8IZX4 1826 aa29.94■■■□□ 2.38
UBA3-206ENST00000464605 ZBTB7AO95365 584 aa29.94■■■□□ 2.38
UBA3-206ENST00000464605 TUBGCP6Q96RT7 1819 aa29.94■■■□□ 2.38
UBA3-206ENST00000464605 PPP2R1AP30153 589 aa29.93■■■□□ 2.38
UBA3-206ENST00000464605 ZNF827Q17R98 1081 aa29.93■■■□□ 2.38
UBA3-206ENST00000464605 VIRMAQ69YN4 1812 aaKnown RBP29.93■■■□□ 2.38
UBA3-206ENST00000464605 HMOX1P09601 288 aa29.92■■■□□ 2.38
UBA3-206ENST00000464605 QSER1Q2KHR3 1735 aa29.92■■■□□ 2.38
UBA3-206ENST00000464605 PTGER2P43116 358 aa29.91■■■□□ 2.38
UBA3-206ENST00000464605 ZNF530Q6P9A1 599 aaPredicted RBP29.91■■■□□ 2.38
UBA3-206ENST00000464605 AKT1S1Q96B36 256 aa29.91■■■□□ 2.38
UBA3-206ENST00000464605 KDM6AO15550 1401 aaPredicted RBP29.9■■■□□ 2.38
UBA3-206ENST00000464605 SCN11AQ9UI33 1791 aa29.9■■■□□ 2.38
UBA3-206ENST00000464605 CCNL1Q9UK58 526 aaPredicted RBP29.89■■■□□ 2.38
UBA3-206ENST00000464605 PALLDQ8WX93 1383 aa29.89■■■□□ 2.37
UBA3-206ENST00000464605 ATF5Q9Y2D1 282 aaPredicted RBP29.88■■■□□ 2.37
UBA3-206ENST00000464605 C5P01031 1676 aa29.88■■■□□ 2.37
UBA3-206ENST00000464605 DCAF5Q96JK2 942 aa29.87■■■□□ 2.37
UBA3-206ENST00000464605 ERVV-2B6SEH9 535 aa29.86■■■□□ 2.37
UBA3-206ENST00000464605 HSP90AB1P08238 724 aaKnown RBP29.86■■■□□ 2.37
UBA3-206ENST00000464605 MTFR1LQ9H019 292 aa29.86■■■□□ 2.37
UBA3-206ENST00000464605 TMOD3Q9NYL9 352 aa29.86■■■□□ 2.37
UBA3-206ENST00000464605 SMARCC1Q92922 1105 aaPredicted RBP29.84■■■□□ 2.37
UBA3-206ENST00000464605 ASAP1Q9ULH1 1129 aa29.84■■■□□ 2.37
UBA3-206ENST00000464605 SGIP1Q9BQI5 828 aa29.83■■■□□ 2.37
UBA3-206ENST00000464605 U2SURPO15042 1029 aaKnown RBP29.82■■■□□ 2.36
UBA3-206ENST00000464605 DDX10Q13206 875 aaKnown RBP29.82■■■□□ 2.36
UBA3-206ENST00000464605 C1orf141Q5JVX7 400 aa29.82■■■□□ 2.36
UBA3-206ENST00000464605 ATG3Q9NT62 314 aa29.82■■■□□ 2.36
UBA3-206ENST00000464605 CFAP53Q96M91 514 aa29.81■■■□□ 2.36
UBA3-206ENST00000464605 ZEB1P37275 1124 aaPredicted RBP29.8■■■□□ 2.36
UBA3-206ENST00000464605 MTHFSDQ2M296 383 aaKnown RBP29.8■■■□□ 2.36
UBA3-206ENST00000464605 AKAP4Q5JQC9 854 aa29.8■■■□□ 2.36
UBA3-206ENST00000464605 ADAMTS7Q9UKP4 1686 aa29.79■■■□□ 2.36
UBA3-206ENST00000464605 PNPLA7Q6ZV29 1317 aa29.78■■■□□ 2.36
UBA3-206ENST00000464605 C4BP0C0L5 1744 aa29.77■■■□□ 2.36
UBA3-206ENST00000464605 COL24A1Q17RW2 1714 aa29.76■■■□□ 2.36
UBA3-206ENST00000464605 LOC102724428A0A0B4J2F2 783 aa29.76■■■□□ 2.35
UBA3-206ENST00000464605 SIK1P57059 783 aa29.76■■■□□ 2.35
UBA3-206ENST00000464605 ZNF831Q5JPB2 1677 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 186.9 ms