RNA–Protein interactions for RNA: ENST00000463596.5

APTX-211, Transcript of aprataxin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APTX, Length 1,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-211ENST00000463596 EP400Q96L91 3159 aa18.98■□□□□ 0.63
APTX-211ENST00000463596 IL13P35225 146 aa18.98■□□□□ 0.63
APTX-211ENST00000463596 COL3A1P02461 1466 aaPredicted RBP18.97■□□□□ 0.63
APTX-211ENST00000463596 KDRP35968 1356 aa18.97■□□□□ 0.63
APTX-211ENST00000463596 SHANK3Q9BYB0 1731 aa18.97■□□□□ 0.63
APTX-211ENST00000463596 DIAPH1O60610 1272 aaKnown RBP18.97■□□□□ 0.63
APTX-211ENST00000463596 ZCRB1Q8TBF4 217 aaKnown RBP18.96■□□□□ 0.63
APTX-211ENST00000463596 MARCH10Q8NA82 808 aaPredicted RBP18.95■□□□□ 0.62
APTX-211ENST00000463596 KAT6BQ8WYB5 2073 aa18.94■□□□□ 0.62
APTX-211ENST00000463596 USHBP1Q8N6Y0 703 aa18.94■□□□□ 0.62
APTX-211ENST00000463596 PCDH11XQ9BZA7 1347 aa18.93■□□□□ 0.62
APTX-211ENST00000463596 PCDH11YQ9BZA8 1340 aa18.93■□□□□ 0.62
APTX-211ENST00000463596 TNS1Q9HBL0 1735 aaKnown RBP18.92■□□□□ 0.62
APTX-211ENST00000463596 SF3B2Q13435 895 aaKnown RBP18.92■□□□□ 0.62
APTX-211ENST00000463596 CNGB1Q14028 1251 aaPredicted RBP18.92■□□□□ 0.62
APTX-211ENST00000463596 SPG7Q9UQ90 795 aa18.92■□□□□ 0.62
APTX-211ENST00000463596 NUDCQ9Y266 331 aa18.92■□□□□ 0.62
APTX-211ENST00000463596 AMOTQ4VCS5 1084 aa18.91■□□□□ 0.62
APTX-211ENST00000463596 MYBBP1AQ9BQG0 1328 aaKnown RBP18.91■□□□□ 0.62
APTX-211ENST00000463596 PRKRIP1Q9H875 184 aaPredicted RBP18.9■□□□□ 0.62
APTX-211ENST00000463596 NHSQ6T4R5 1651 aa18.9■□□□□ 0.62
APTX-211ENST00000463596 RGPD3A6NKT7 1758 aaPredicted RBP18.9■□□□□ 0.62
APTX-211ENST00000463596 RGPD4Q7Z3J3 1758 aa18.9■□□□□ 0.62
APTX-211ENST00000463596 MAPK8IP2Q13387 824 aaPredicted RBP18.88■□□□□ 0.61
APTX-211ENST00000463596 PLEKHO1Q53GL0 409 aaPredicted RBP18.88■□□□□ 0.61
APTX-211ENST00000463596 FAM182BQ5T319 152 aa18.88■□□□□ 0.61
APTX-211ENST00000463596 SULT6B1Q6IMI4 303 aa18.88■□□□□ 0.61
APTX-211ENST00000463596 BCL11BQ9C0K0 894 aaPredicted RBP18.87■□□□□ 0.61
APTX-211ENST00000463596 BAG6P46379 1132 aa18.86■□□□□ 0.61
APTX-211ENST00000463596 NKX1-1Q15270 411 aaPredicted RBP18.86■□□□□ 0.61
APTX-211ENST00000463596 DDX54Q8TDD1 881 aaKnown RBP18.86■□□□□ 0.61
APTX-211ENST00000463596 TRIM37O94972 964 aa18.85■□□□□ 0.61
APTX-211ENST00000463596 IFNL2Q8IZJ0 200 aa18.85■□□□□ 0.61
APTX-211ENST00000463596 HSP90AB1P08238 724 aaKnown RBP18.84■□□□□ 0.61
APTX-211ENST00000463596 DOT1LQ8TEK3 1739 aa18.84■□□□□ 0.61
APTX-211ENST00000463596 U2SURPO15042 1029 aaKnown RBP18.83■□□□□ 0.61
APTX-211ENST00000463596 CYP27B1O15528 508 aa18.83■□□□□ 0.61
APTX-211ENST00000463596 AEBP1Q8IUX7 1158 aa18.83■□□□□ 0.61
APTX-211ENST00000463596 PLSCR1O15162 318 aa18.82■□□□□ 0.6
APTX-211ENST00000463596 FCHSD2O94868 740 aa18.82■□□□□ 0.6
APTX-211ENST00000463596 BTAF1O14981 1849 aa18.82■□□□□ 0.6
APTX-211ENST00000463596 ITGB4P16144 1822 aa18.82■□□□□ 0.6
APTX-211ENST00000463596 PHKG2P15735 406 aa18.81■□□□□ 0.6
APTX-211ENST00000463596 PNNQ9H307 717 aaKnown RBP18.81■□□□□ 0.6
APTX-211ENST00000463596 ANP32CO43423 234 aa18.79■□□□□ 0.6
APTX-211ENST00000463596 APBA3O96018 575 aa18.79■□□□□ 0.6
APTX-211ENST00000463596 HMOX1P09601 288 aa18.79■□□□□ 0.6
APTX-211ENST00000463596 U2AF1L5P0DN76 240 aaPredicted RBP18.79■□□□□ 0.6
APTX-211ENST00000463596 U2AF1Q01081 240 aaKnown RBP eCLIP18.79■□□□□ 0.62e-8■■■■■ 37
APTX-211ENST00000463596 SCN11AQ9UI33 1791 aa18.79■□□□□ 0.6
APTX-211ENST00000463596 C1orf141Q5JVX7 400 aa18.78■□□□□ 0.6
APTX-211ENST00000463596 ZNF530Q6P9A1 599 aaPredicted RBP18.78■□□□□ 0.6
APTX-211ENST00000463596 DCAF5Q96JK2 942 aa18.78■□□□□ 0.6
APTX-211ENST00000463596 RSPH6AQ9H0K4 717 aa18.78■□□□□ 0.6
APTX-211ENST00000463596 VIRMAQ69YN4 1812 aaKnown RBP18.78■□□□□ 0.6
APTX-211ENST00000463596 RREB1Q92766 1687 aa18.78■□□□□ 0.6
APTX-211ENST00000463596 TOGARAM1Q9Y4F4 1720 aa18.78■□□□□ 0.6
APTX-211ENST00000463596 AKAP4Q5JQC9 854 aa18.77■□□□□ 0.6
APTX-211ENST00000463596 GAS2L2Q8NHY3 880 aa18.77■□□□□ 0.6
APTX-211ENST00000463596 ADAMTS7Q9UKP4 1686 aa18.77■□□□□ 0.59
APTX-211ENST00000463596 ERVV-2B6SEH9 535 aa18.76■□□□□ 0.59
APTX-211ENST00000463596 HMGB2P26583 209 aaKnown RBP18.76■□□□□ 0.59
APTX-211ENST00000463596 CAMKK2Q96RR4 588 aa18.76■□□□□ 0.59
APTX-211ENST00000463596 KCNQ2O43526 872 aa18.74■□□□□ 0.59
APTX-211ENST00000463596 NEFMP07197 916 aa18.74■□□□□ 0.59
APTX-211ENST00000463596 PRIM1P49642 420 aaKnown RBP18.74■□□□□ 0.59
APTX-211ENST00000463596 DEFB132Q7Z7B7 95 aa18.74■□□□□ 0.59
APTX-211ENST00000463596 ACSBG1Q96GR2 724 aa18.74■□□□□ 0.59
APTX-211ENST00000463596 LY75O60449 1722 aa18.74■□□□□ 0.59
APTX-211ENST00000463596 PRKAR2BP31323 418 aa18.74■□□□□ 0.59
APTX-211ENST00000463596 EN1Q05925 392 aaPredicted RBP18.74■□□□□ 0.59
APTX-211ENST00000463596 MTHFSDQ2M296 383 aaKnown RBP18.73■□□□□ 0.59
APTX-211ENST00000463596 NUP188Q5SRE5 1749 aa18.71■□□□□ 0.59
APTX-211ENST00000463596 KDM6AO15550 1401 aaPredicted RBP18.71■□□□□ 0.59
APTX-211ENST00000463596 PTF1AQ7RTS3 328 aa18.71■□□□□ 0.59
APTX-211ENST00000463596 SMARCC1Q92922 1105 aaPredicted RBP18.71■□□□□ 0.59
APTX-211ENST00000463596 SYTL4Q96C24 671 aaPredicted RBP18.71■□□□□ 0.59
APTX-211ENST00000463596 MRC1P22897 1456 aa18.7■□□□□ 0.58
APTX-211ENST00000463596 HTATSF1O43719 755 aaKnown RBP18.7■□□□□ 0.58
APTX-211ENST00000463596 WDR43Q15061 677 aaKnown RBP eCLIP18.7■□□□□ 0.58
APTX-211ENST00000463596 EZH2Q15910 746 aaKnown RBP18.7■□□□□ 0.58
APTX-211ENST00000463596 SLC27A3Q5K4L6 730 aa18.7■□□□□ 0.58
APTX-211ENST00000463596 TMOD3Q9NYL9 352 aa18.7■□□□□ 0.58
APTX-211ENST00000463596 MAP3K5Q99683 1374 aa18.69■□□□□ 0.58
APTX-211ENST00000463596 GNAT3A8MTJ3 354 aa18.69■□□□□ 0.58
APTX-211ENST00000463596 PLEKHF1Q96S99 279 aa18.69■□□□□ 0.58
APTX-211ENST00000463596 DLG5Q8TDM6 1919 aa18.69■□□□□ 0.58
APTX-211ENST00000463596 ZNF831Q5JPB2 1677 aa18.69■□□□□ 0.58
APTX-211ENST00000463596 MPRIPQ6WCQ1 1025 aa18.68■□□□□ 0.58
APTX-211ENST00000463596 PHACTR3Q96KR7 559 aa18.68■□□□□ 0.58
APTX-211ENST00000463596 RNMTO43148 476 aaKnown RBP18.67■□□□□ 0.58
APTX-211ENST00000463596 TXNRD1Q16881 649 aa18.67■□□□□ 0.58
APTX-211ENST00000463596 PIGBQ92521 554 aa18.67■□□□□ 0.58
APTX-211ENST00000463596 MAPK8IP3Q9UPT6 1336 aa18.67■□□□□ 0.58
APTX-211ENST00000463596 CABP4P57796 275 aa18.66■□□□□ 0.58
APTX-211ENST00000463596 SIPA1L3O60292 1781 aaPredicted RBP18.66■□□□□ 0.58
APTX-211ENST00000463596 NBPF14Q5TI25 921 aa18.65■□□□□ 0.58
APTX-211ENST00000463596 CEMIPQ8WUJ3 1361 aa18.65■□□□□ 0.58
APTX-211ENST00000463596 PROM2Q8N271 834 aa18.64■□□□□ 0.57
APTX-211ENST00000463596 SLC52A2Q9HAB3 445 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms