RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 PLSCR1O15162 318 aa16.35■□□□□ 0.21
HPS1-206ENST00000462743 DDX10Q13206 875 aaKnown RBP16.35■□□□□ 0.21
HPS1-206ENST00000462743 CAMKK2Q96RR4 588 aa16.35■□□□□ 0.21
HPS1-206ENST00000462743 EP400Q96L91 3159 aa16.35■□□□□ 0.21
HPS1-206ENST00000462743 APBA3O96018 575 aa16.34■□□□□ 0.21
HPS1-206ENST00000462743 DDX54Q8TDD1 881 aaKnown RBP16.34■□□□□ 0.21
HPS1-206ENST00000462743 TNS1Q9HBL0 1735 aaKnown RBP16.33■□□□□ 0.21
HPS1-206ENST00000462743 PARD3Q8TEW0 1356 aa16.33■□□□□ 0.2
HPS1-206ENST00000462743 DIAPH1O60610 1272 aaKnown RBP16.32■□□□□ 0.2
HPS1-206ENST00000462743 PPP2R1AP30153 589 aa16.32■□□□□ 0.2
HPS1-206ENST00000462743 KDRP35968 1356 aa16.32■□□□□ 0.2
HPS1-206ENST00000462743 EN1Q05925 392 aaPredicted RBP16.32■□□□□ 0.2
HPS1-206ENST00000462743 SHANK3Q9BYB0 1731 aa16.32■□□□□ 0.2
HPS1-206ENST00000462743 SPG7Q9UQ90 795 aa16.32■□□□□ 0.2
HPS1-206ENST00000462743 CYP27B1O15528 508 aa16.31■□□□□ 0.2
HPS1-206ENST00000462743 NKX1-1Q15270 411 aaPredicted RBP16.31■□□□□ 0.2
HPS1-206ENST00000462743 PTF1AQ7RTS3 328 aa16.31■□□□□ 0.2
HPS1-206ENST00000462743 PCDH11XQ9BZA7 1347 aa16.3■□□□□ 0.2
HPS1-206ENST00000462743 PCDH11YQ9BZA8 1340 aa16.3■□□□□ 0.2
HPS1-206ENST00000462743 KCNQ2O43526 872 aa16.3■□□□□ 0.2
HPS1-206ENST00000462743 PKD1L3Q7Z443 1732 aa16.3■□□□□ 0.2
HPS1-206ENST00000462743 CNGB1Q14028 1251 aaPredicted RBP16.29■□□□□ 0.2
HPS1-206ENST00000462743 RALBP1Q15311 655 aa16.29■□□□□ 0.2
HPS1-206ENST00000462743 EZH2Q15910 746 aaKnown RBP16.29■□□□□ 0.2
HPS1-206ENST00000462743 AMOTQ4VCS5 1084 aa16.29■□□□□ 0.2
HPS1-206ENST00000462743 SULT6B1Q6IMI4 303 aa16.29■□□□□ 0.2
HPS1-206ENST00000462743 ZNF316A6NFI3 1004 aaPredicted RBP16.28■□□□□ 0.2
HPS1-206ENST00000462743 PLEKHO1Q53GL0 409 aaPredicted RBP16.28■□□□□ 0.2
HPS1-206ENST00000462743 CFAP53Q96M91 514 aa16.28■□□□□ 0.2
HPS1-206ENST00000462743 COL3A1P02461 1466 aaPredicted RBP16.28■□□□□ 0.2
HPS1-206ENST00000462743 AEBP1Q8IUX7 1158 aa16.27■□□□□ 0.2
HPS1-206ENST00000462743 IFNL2Q8IZJ0 200 aa16.27■□□□□ 0.2
HPS1-206ENST00000462743 ACSBG1Q96GR2 724 aa16.27■□□□□ 0.2
HPS1-206ENST00000462743 NHSQ6T4R5 1651 aa16.27■□□□□ 0.19
HPS1-206ENST00000462743 RGPD3A6NKT7 1758 aaPredicted RBP16.26■□□□□ 0.19
HPS1-206ENST00000462743 RGPD4Q7Z3J3 1758 aa16.26■□□□□ 0.19
HPS1-206ENST00000462743 PRIM1P49642 420 aaKnown RBP16.26■□□□□ 0.19
HPS1-206ENST00000462743 PHKG2P15735 406 aa16.25■□□□□ 0.19
HPS1-206ENST00000462743 PROM2Q8N271 834 aa16.25■□□□□ 0.19
HPS1-206ENST00000462743 NUDCQ9Y266 331 aa16.24■□□□□ 0.19
HPS1-206ENST00000462743 HSP90AB1P08238 724 aaKnown RBP16.23■□□□□ 0.19
HPS1-206ENST00000462743 BTAF1O14981 1849 aa16.23■□□□□ 0.19
HPS1-206ENST00000462743 RREB1Q92766 1687 aa16.21■□□□□ 0.19
HPS1-206ENST00000462743 HMOX1P09601 288 aa16.21■□□□□ 0.19
HPS1-206ENST00000462743 TXNRD1Q16881 649 aa16.21■□□□□ 0.19
HPS1-206ENST00000462743 ITGB4P16144 1822 aa16.2■□□□□ 0.18
HPS1-206ENST00000462743 ERVV-2B6SEH9 535 aa16.2■□□□□ 0.18
HPS1-206ENST00000462743 U2SURPO15042 1029 aaKnown RBP16.2■□□□□ 0.18
HPS1-206ENST00000462743 ZNF530Q6P9A1 599 aaPredicted RBP16.2■□□□□ 0.18
HPS1-206ENST00000462743 DCAF5Q96JK2 942 aa16.2■□□□□ 0.18
HPS1-206ENST00000462743 DOT1LQ8TEK3 1739 aa16.19■□□□□ 0.18
HPS1-206ENST00000462743 FCHSD2O94868 740 aa16.19■□□□□ 0.18
HPS1-206ENST00000462743 NBPF14Q5TI25 921 aa16.19■□□□□ 0.18
HPS1-206ENST00000462743 SYTL4Q96C24 671 aaPredicted RBP16.19■□□□□ 0.18
HPS1-206ENST00000462743 PRKRIP1Q9H875 184 aaPredicted RBP16.19■□□□□ 0.18
HPS1-206ENST00000462743 AKAP4Q5JQC9 854 aa16.18■□□□□ 0.18
HPS1-206ENST00000462743 SLC27A3Q5K4L6 730 aa16.18■□□□□ 0.18
HPS1-206ENST00000462743 PIGBQ92521 554 aa16.18■□□□□ 0.18
HPS1-206ENST00000462743 MYBBP1AQ9BQG0 1328 aaKnown RBP16.18■□□□□ 0.18
HPS1-206ENST00000462743 HMGB2P26583 209 aaKnown RBP16.17■□□□□ 0.18
HPS1-206ENST00000462743 MTHFSDQ2M296 383 aaKnown RBP16.17■□□□□ 0.18
HPS1-206ENST00000462743 C1orf141Q5JVX7 400 aa16.17■□□□□ 0.18
HPS1-206ENST00000462743 MPRIPQ6WCQ1 1025 aa16.17■□□□□ 0.18
HPS1-206ENST00000462743 SMARCC1Q92922 1105 aaPredicted RBP16.17■□□□□ 0.18
HPS1-206ENST00000462743 RSPH6AQ9H0K4 717 aa16.17■□□□□ 0.18
HPS1-206ENST00000462743 NUP188Q5SRE5 1749 aa16.16■□□□□ 0.18
HPS1-206ENST00000462743 U2AF1L5P0DN76 240 aaPredicted RBP16.16■□□□□ 0.18
HPS1-206ENST00000462743 U2AF1Q01081 240 aaKnown RBP eCLIP16.16■□□□□ 0.18
HPS1-206ENST00000462743 TOGARAM1Q9Y4F4 1720 aa16.16■□□□□ 0.18
HPS1-206ENST00000462743 LRRC4BQ9NT99 713 aa16.15■□□□□ 0.18
HPS1-206ENST00000462743 LY75O60449 1722 aa16.14■□□□□ 0.17
HPS1-206ENST00000462743 GAS2L2Q8NHY3 880 aa16.14■□□□□ 0.17
HPS1-206ENST00000462743 TMOD3Q9NYL9 352 aa16.14■□□□□ 0.17
HPS1-206ENST00000462743 KDM6AO15550 1401 aaPredicted RBP16.13■□□□□ 0.17
HPS1-206ENST00000462743 PRKAR2BP31323 418 aa16.13■□□□□ 0.17
HPS1-206ENST00000462743 PHACTR3Q96KR7 559 aa16.13■□□□□ 0.17
HPS1-206ENST00000462743 SCN11AQ9UI33 1791 aa16.13■□□□□ 0.17
HPS1-206ENST00000462743 R3HDM1Q15032 1099 aaKnown RBP16.12■□□□□ 0.17
HPS1-206ENST00000462743 SLC15A2Q16348 729 aa16.12■□□□□ 0.17
HPS1-206ENST00000462743 RNMTO43148 476 aaKnown RBP16.11■□□□□ 0.17
HPS1-206ENST00000462743 CABP4P57796 275 aa16.11■□□□□ 0.17
HPS1-206ENST00000462743 PNNQ9H307 717 aaKnown RBP16.11■□□□□ 0.17
HPS1-206ENST00000462743 LGR6Q9HBX8 967 aa16.11■□□□□ 0.17
HPS1-206ENST00000462743 ANO8Q9HCE9 1232 aaPredicted RBP16.11■□□□□ 0.17
HPS1-206ENST00000462743 PSDA5PKW4 1024 aaPredicted RBP16.1■□□□□ 0.17
HPS1-206ENST00000462743 NFATC2IPQ8NCF5 419 aa16.1■□□□□ 0.17
HPS1-206ENST00000462743 AKT1S1Q96B36 256 aa16.1■□□□□ 0.17
HPS1-206ENST00000462743 PLEKHF1Q96S99 279 aa16.1■□□□□ 0.17
HPS1-206ENST00000462743 ATG3Q9NT62 314 aa16.1■□□□□ 0.17
HPS1-206ENST00000462743 STK32BQ9NY57 414 aa16.1■□□□□ 0.17
HPS1-206ENST00000462743 CCNL1Q9UK58 526 aaPredicted RBP16.1■□□□□ 0.17
HPS1-206ENST00000462743 ASAP1Q9ULH1 1129 aa16.1■□□□□ 0.17
HPS1-206ENST00000462743 ADAMTS7Q9UKP4 1686 aa16.1■□□□□ 0.17
HPS1-206ENST00000462743 PALLDQ8WX93 1383 aa16.1■□□□□ 0.17
HPS1-206ENST00000462743 GNAT3A8MTJ3 354 aa16.09■□□□□ 0.17
HPS1-206ENST00000462743 IL17REQ8NFR9 667 aa16.09■□□□□ 0.17
HPS1-206ENST00000462743 VIRMAQ69YN4 1812 aaKnown RBP16.08■□□□□ 0.17
HPS1-206ENST00000462743 HTATSF1O43719 755 aaKnown RBP16.08■□□□□ 0.16
HPS1-206ENST00000462743 SLC52A2Q9HAB3 445 aa16.08■□□□□ 0.16
HPS1-206ENST00000462743 PAPPAQ13219 1627 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms