RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 KDM2BQ8NHM5 1336 aa14.59□□□□□ -0.07
TRAPPC3-205ENST00000462715 EVA1CP58658 441 aa14.58□□□□□ -0.07
TRAPPC3-205ENST00000462715 RBM10P98175 930 aaKnown RBP14.58□□□□□ -0.07
TRAPPC3-205ENST00000462715 IP6K1Q92551 441 aa14.58□□□□□ -0.07
TRAPPC3-205ENST00000462715 FLT4P35916 1363 aa14.58□□□□□ -0.08
TRAPPC3-205ENST00000462715 NRAPQ86VF7 1730 aa14.58□□□□□ -0.08
TRAPPC3-205ENST00000462715 GOLGA6L3A6NEY3 463 aa14.58□□□□□ -0.08
TRAPPC3-205ENST00000462715 FGD1P98174 961 aa14.58□□□□□ -0.08
TRAPPC3-205ENST00000462715 PRDM4Q9UKN5 801 aa14.58□□□□□ -0.08
TRAPPC3-205ENST00000462715 TRPC5Q9UL62 973 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC3-205ENST00000462715 COL5A2P05997 1499 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC3-205ENST00000462715 HOXC9P31274 260 aa14.57□□□□□ -0.08
TRAPPC3-205ENST00000462715 BECN1Q14457 450 aa14.57□□□□□ -0.08
TRAPPC3-205ENST00000462715 STRN4Q9NRL3 753 aa14.57□□□□□ -0.08
TRAPPC3-205ENST00000462715 POLKQ9UBT6 870 aa14.57□□□□□ -0.08
TRAPPC3-205ENST00000462715 EMILIN1Q9Y6C2 1016 aa14.57□□□□□ -0.08
TRAPPC3-205ENST00000462715 MAP2P11137 1827 aaKnown RBP14.57□□□□□ -0.08
TRAPPC3-205ENST00000462715 AXIN2Q9Y2T1 843 aa14.56□□□□□ -0.08
TRAPPC3-205ENST00000462715 C8orf34Q49A92 452 aa14.56□□□□□ -0.08
TRAPPC3-205ENST00000462715 QTRT2Q9H974 415 aaKnown RBP14.56□□□□□ -0.08
TRAPPC3-205ENST00000462715 ATRNO75882 1429 aa14.56□□□□□ -0.08
TRAPPC3-205ENST00000462715 MRE11P49959 708 aa14.55□□□□□ -0.08
TRAPPC3-205ENST00000462715 VPS72Q15906 364 aa14.55□□□□□ -0.08
TRAPPC3-205ENST00000462715 RGS17Q9UGC6 210 aaPredicted RBP14.55□□□□□ -0.08
TRAPPC3-205ENST00000462715 CSB-PGBD3P0DP91 1061 aa14.55□□□□□ -0.08
TRAPPC3-205ENST00000462715 RALBP1Q15311 655 aa14.55□□□□□ -0.08
TRAPPC3-205ENST00000462715 CCDC9Q9Y3X0 531 aaKnown RBP14.55□□□□□ -0.08
TRAPPC3-205ENST00000462715 PARD3Q8TEW0 1356 aa14.55□□□□□ -0.08
TRAPPC3-205ENST00000462715 PEAK1Q9H792 1746 aa14.55□□□□□ -0.08
TRAPPC3-205ENST00000462715 RGPD5Q99666 1765 aa14.54□□□□□ -0.08
TRAPPC3-205ENST00000462715 ERBB3P21860 1342 aa14.54□□□□□ -0.08
TRAPPC3-205ENST00000462715 WDR17Q8IZU2 1322 aa14.54□□□□□ -0.08
TRAPPC3-205ENST00000462715 CDK12Q9NYV4 1490 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC3-205ENST00000462715 XRCC6P12956 609 aaKnown RBP eCLIP14.54□□□□□ -0.08
TRAPPC3-205ENST00000462715 ANKRD24Q8TF21 1146 aa14.54□□□□□ -0.08
TRAPPC3-205ENST00000462715 CRB1P82279 1406 aa14.53□□□□□ -0.08
TRAPPC3-205ENST00000462715 SLC4A3P48751 1232 aa14.52□□□□□ -0.08
TRAPPC3-205ENST00000462715 HSP90AB2PQ58FF8 381 aa14.52□□□□□ -0.08
TRAPPC3-205ENST00000462715 LARP1Q6PKG0 1096 aaKnown RBP14.52□□□□□ -0.08
TRAPPC3-205ENST00000462715 TOM1L2Q6ZVM7 507 aa14.52□□□□□ -0.08
TRAPPC3-205ENST00000462715 FAM208AQ9UK61 1670 aaKnown RBP14.52□□□□□ -0.09
TRAPPC3-205ENST00000462715 MTHFSP49914 203 aa14.52□□□□□ -0.09
TRAPPC3-205ENST00000462715 RBM6P78332 1123 aaKnown RBP14.52□□□□□ -0.09
TRAPPC3-205ENST00000462715 MTERF4Q7Z6M4 381 aaKnown RBP14.52□□□□□ -0.09
TRAPPC3-205ENST00000462715 LTV1Q96GA3 475 aaPredicted RBP14.52□□□□□ -0.09
TRAPPC3-205ENST00000462715 GJD4Q96KN9 370 aaPredicted RBP14.52□□□□□ -0.09
TRAPPC3-205ENST00000462715 SPATA31A5Q5VU36 1347 aa14.52□□□□□ -0.09
TRAPPC3-205ENST00000462715 SPATA31A7Q8IWB4 1347 aa14.52□□□□□ -0.09
TRAPPC3-205ENST00000462715 PPP2R1AP30153 589 aa14.51□□□□□ -0.09
TRAPPC3-205ENST00000462715 ESPNB1AK53 854 aa14.51□□□□□ -0.09
TRAPPC3-205ENST00000462715 RXRBP28702 533 aa14.51□□□□□ -0.09
TRAPPC3-205ENST00000462715 POTEAQ6S8J7 498 aa14.51□□□□□ -0.09
TRAPPC3-205ENST00000462715 NCLP19338 710 aaKnown RBP14.5□□□□□ -0.09
TRAPPC3-205ENST00000462715 SMAP1Q8IYB5 467 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC3-205ENST00000462715 SPATA31A1Q5TZJ5 1347 aa14.5□□□□□ -0.09
TRAPPC3-205ENST00000462715 CFAP53Q96M91 514 aa14.5□□□□□ -0.09
TRAPPC3-205ENST00000462715 CARD10Q9BWT7 1032 aa14.5□□□□□ -0.09
TRAPPC3-205ENST00000462715 NLRP2Q9NX02 1062 aa14.5□□□□□ -0.09
TRAPPC3-205ENST00000462715 MYBBP1AQ9BQG0 1328 aaKnown RBP14.5□□□□□ -0.09
TRAPPC3-205ENST00000462715 THRAP3Q9Y2W1 955 aaKnown RBP14.49□□□□□ -0.09
TRAPPC3-205ENST00000462715 GLI3P10071 1580 aa14.48□□□□□ -0.09
TRAPPC3-205ENST00000462715 TCP11L2Q8N4U5 519 aa14.48□□□□□ -0.09
TRAPPC3-205ENST00000462715 EIF4A2Q14240 407 aaKnown RBP14.47□□□□□ -0.09
TRAPPC3-205ENST00000462715 ANTXR1Q9H6X2 564 aa14.46□□□□□ -0.09
TRAPPC3-205ENST00000462715 BARGINQ6ZT62 677 aa14.46□□□□□ -0.09
TRAPPC3-205ENST00000462715 MYH16Q9H6N6 1097 aa14.46□□□□□ -0.09
TRAPPC3-205ENST00000462715 DIAPH1O60610 1272 aaKnown RBP14.45□□□□□ -0.1
TRAPPC3-205ENST00000462715 CRBNQ96SW2 442 aa14.45□□□□□ -0.1
TRAPPC3-205ENST00000462715 FAM98CQ17RN3 349 aaKnown RBP14.45□□□□□ -0.1
TRAPPC3-205ENST00000462715 CDCA7Q9BWT1 371 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC3-205ENST00000462715 A0A0G2JS52 829 aa14.44□□□□□ -0.1
TRAPPC3-205ENST00000462715 PDE4CQ08493 712 aa14.44□□□□□ -0.1
TRAPPC3-205ENST00000462715 NBPF6Q5VWK0 638 aa14.44□□□□□ -0.1
TRAPPC3-205ENST00000462715 NBPF4Q96M43 638 aa14.44□□□□□ -0.1
TRAPPC3-205ENST00000462715 COL3A1P02461 1466 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC3-205ENST00000462715 UTP14CQ5TAP6 766 aaKnown RBP14.44□□□□□ -0.1
TRAPPC3-205ENST00000462715 ONECUT3O60422 494 aaPredicted RBP14.43□□□□□ -0.1
TRAPPC3-205ENST00000462715 IL13P35225 146 aa14.43□□□□□ -0.1
TRAPPC3-205ENST00000462715 EYA1Q99502 592 aa14.43□□□□□ -0.1
TRAPPC3-205ENST00000462715 RGPD2P0DJD1 1756 aa14.43□□□□□ -0.1
TRAPPC3-205ENST00000462715 IGSF1Q8N6C5 1336 aa14.42□□□□□ -0.1
TRAPPC3-205ENST00000462715 WNK3Q9BYP7 1800 aa14.42□□□□□ -0.1
TRAPPC3-205ENST00000462715 IL2RBP14784 551 aa14.42□□□□□ -0.1
TRAPPC3-205ENST00000462715 THSD7AQ9UPZ6 1657 aa14.42□□□□□ -0.1
TRAPPC3-205ENST00000462715 RGS12O14924 1447 aa14.41□□□□□ -0.1
TRAPPC3-205ENST00000462715 NCAPD2Q15021 1401 aa14.41□□□□□ -0.1
TRAPPC3-205ENST00000462715 SEPT12Q8IYM1 358 aa14.41□□□□□ -0.1
TRAPPC3-205ENST00000462715 USHBP1Q8N6Y0 703 aa14.41□□□□□ -0.1
TRAPPC3-205ENST00000462715 RAPGEF4Q8WZA2 1011 aa14.41□□□□□ -0.1
TRAPPC3-205ENST00000462715 DISP2A7MBM2 1401 aa14.4□□□□□ -0.1
TRAPPC3-205ENST00000462715 RGPD1P0DJD0 1748 aa14.4□□□□□ -0.1
TRAPPC3-205ENST00000462715 PTMSP20962 102 aa14.4□□□□□ -0.1
TRAPPC3-205ENST00000462715 MCM4P33991 863 aa14.4□□□□□ -0.1
TRAPPC3-205ENST00000462715 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC3-205ENST00000462715 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC3-205ENST00000462715 TRIM44Q96DX7 344 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC3-205ENST00000462715 PARP4Q9UKK3 1724 aaKnown RBP14.4□□□□□ -0.1
TRAPPC3-205ENST00000462715 U2SURPO15042 1029 aaKnown RBP14.4□□□□□ -0.1
TRAPPC3-205ENST00000462715 OFD1O75665 1012 aa14.39□□□□□ -0.11
TRAPPC3-205ENST00000462715 TATP17735 454 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms