RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 NBPF6Q5VWK0 638 aa11.78□□□□□ -0.52
DDX39B-215ENST00000462256 NBPF4Q96M43 638 aa11.78□□□□□ -0.52
DDX39B-215ENST00000462256 PNPLA6Q8IY17 1366 aa11.78□□□□□ -0.52
DDX39B-215ENST00000462256 SMC4Q9NTJ3 1288 aa11.77□□□□□ -0.52
DDX39B-215ENST00000462256 ADAMTS8Q9UP79 889 aa11.77□□□□□ -0.52
DDX39B-215ENST00000462256 IQGAP1P46940 1657 aa11.77□□□□□ -0.52
DDX39B-215ENST00000462256 NFE2L2Q16236 605 aa11.77□□□□□ -0.53
DDX39B-215ENST00000462256 TAF7Q15545 349 aaPredicted RBP11.77□□□□□ -0.53
DDX39B-215ENST00000462256 HDGFL1Q5TGJ6 251 aa11.77□□□□□ -0.53
DDX39B-215ENST00000462256 FRAT2O75474 233 aaPredicted RBP11.76□□□□□ -0.53
DDX39B-215ENST00000462256 AKAP4Q5JQC9 854 aa11.76□□□□□ -0.53
DDX39B-215ENST00000462256 MCM10Q7L590 875 aa11.76□□□□□ -0.53
DDX39B-215ENST00000462256 MROH1Q8NDA8 1641 aa11.76□□□□□ -0.53
DDX39B-215ENST00000462256 FKBP5Q13451 457 aaPredicted RBP11.76□□□□□ -0.53
DDX39B-215ENST00000462256 AEBP1Q8IUX7 1158 aa11.76□□□□□ -0.53
DDX39B-215ENST00000462256 ERBB3P21860 1342 aa11.76□□□□□ -0.53
DDX39B-215ENST00000462256 MYL6BP14649 208 aa11.76□□□□□ -0.53
DDX39B-215ENST00000462256 AMER1Q5JTC6 1135 aaPredicted RBP11.75□□□□□ -0.53
DDX39B-215ENST00000462256 TMEM131LA2VDJ0 1609 aa11.75□□□□□ -0.53
DDX39B-215ENST00000462256 TCERG1O14776 1098 aaKnown RBP11.75□□□□□ -0.53
DDX39B-215ENST00000462256 DEPDC5O75140 1603 aa11.75□□□□□ -0.53
DDX39B-215ENST00000462256 A0A087WZG4 1122 aa11.75□□□□□ -0.53
DDX39B-215ENST00000462256 C9orf78Q9NZ63 289 aaPredicted RBP11.75□□□□□ -0.53
DDX39B-215ENST00000462256 GNPATO15228 680 aa11.74□□□□□ -0.53
DDX39B-215ENST00000462256 DEKP35659 375 aaKnown RBP11.74□□□□□ -0.53
DDX39B-215ENST00000462256 NFATC2IPQ8NCF5 419 aa11.74□□□□□ -0.53
DDX39B-215ENST00000462256 TECPR2O15040 1411 aa11.74□□□□□ -0.53
DDX39B-215ENST00000462256 CCDC30Q5VVM6 783 aa11.74□□□□□ -0.53
DDX39B-215ENST00000462256 TULP4Q9NRJ4 1543 aa11.74□□□□□ -0.53
DDX39B-215ENST00000462256 CCDC125Q86Z20 511 aa11.74□□□□□ -0.53
DDX39B-215ENST00000462256 FLAD1Q8NFF5 587 aa11.73□□□□□ -0.53
DDX39B-215ENST00000462256 DCTN1Q14203 1278 aa11.73□□□□□ -0.53
DDX39B-215ENST00000462256 TRAPPC3LQ5T215 181 aa11.73□□□□□ -0.53
DDX39B-215ENST00000462256 AATKQ6ZMQ8 1374 aa11.73□□□□□ -0.53
DDX39B-215ENST00000462256 KCNJ4P48050 445 aa11.73□□□□□ -0.53
DDX39B-215ENST00000462256 EN1Q05925 392 aaPredicted RBP11.73□□□□□ -0.53
DDX39B-215ENST00000462256 GORABQ5T7V8 394 aa11.72□□□□□ -0.53
DDX39B-215ENST00000462256 ATP7BP35670 1465 aa11.72□□□□□ -0.53
DDX39B-215ENST00000462256 SLC39A6Q13433 755 aa11.72□□□□□ -0.53
DDX39B-215ENST00000462256 MIS18AQ9NYP9 233 aa11.72□□□□□ -0.53
DDX39B-215ENST00000462256 PARP3Q9Y6F1 533 aa11.72□□□□□ -0.53
DDX39B-215ENST00000462256 INSRP06213 1382 aa11.71□□□□□ -0.53
DDX39B-215ENST00000462256 E9PSI1 815 aa11.71□□□□□ -0.53
DDX39B-215ENST00000462256 SNRPA1P09661 255 aaKnown RBP11.71□□□□□ -0.53
DDX39B-215ENST00000462256 TMPOP42166 694 aaKnown RBP11.71□□□□□ -0.54
DDX39B-215ENST00000462256 PDE4CQ08493 712 aa11.7□□□□□ -0.54
DDX39B-215ENST00000462256 THUMPD2Q9BTF0 503 aaKnown RBP11.7□□□□□ -0.54
DDX39B-215ENST00000462256 POTEAQ6S8J7 498 aa11.7□□□□□ -0.54
DDX39B-215ENST00000462256 SETBP1Q9Y6X0 1596 aa11.7□□□□□ -0.54
DDX39B-215ENST00000462256 GPR162Q16538 588 aa11.7□□□□□ -0.54
DDX39B-215ENST00000462256 FNBP4Q8N3X1 1017 aaPredicted RBP11.7□□□□□ -0.54
DDX39B-215ENST00000462256 AXIN2Q9Y2T1 843 aa11.7□□□□□ -0.54
DDX39B-215ENST00000462256 SPATA31A1Q5TZJ5 1347 aa11.69□□□□□ -0.54
DDX39B-215ENST00000462256 SPATA31A5Q5VU36 1347 aa11.69□□□□□ -0.54
DDX39B-215ENST00000462256 SPATA31A7Q8IWB4 1347 aa11.69□□□□□ -0.54
DDX39B-215ENST00000462256 PSDA5PKW4 1024 aaPredicted RBP11.69□□□□□ -0.54
DDX39B-215ENST00000462256 DLC1Q96QB1 1528 aa11.69□□□□□ -0.54
DDX39B-215ENST00000462256 MTHFSDQ2M296 383 aaKnown RBP11.69□□□□□ -0.54
DDX39B-215ENST00000462256 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.69□□□□□ -0.546e-20■□□□□ 9.3
DDX39B-215ENST00000462256 WWC3Q9ULE0 1092 aa11.69□□□□□ -0.54
DDX39B-215ENST00000462256 UBR1Q8IWV7 1749 aa11.68□□□□□ -0.54
DDX39B-215ENST00000462256 RTL5Q5HYW3 569 aaPredicted RBP11.68□□□□□ -0.54
DDX39B-215ENST00000462256 NEURL4Q96JN8 1562 aa11.68□□□□□ -0.54
DDX39B-215ENST00000462256 DEFB132Q7Z7B7 95 aa11.68□□□□□ -0.54
DDX39B-215ENST00000462256 ZNF622Q969S3 477 aaKnown RBP eCLIP11.68□□□□□ -0.544e-14■□□□□ 11.2
DDX39B-215ENST00000462256 ERVV-2B6SEH9 535 aa11.68□□□□□ -0.54
DDX39B-215ENST00000462256 FBXW7Q969H0 707 aa11.68□□□□□ -0.54
DDX39B-215ENST00000462256 SETDB2Q96T68 719 aa11.68□□□□□ -0.54
DDX39B-215ENST00000462256 HSP90AB3PQ58FF7 597 aa11.67□□□□□ -0.54
DDX39B-215ENST00000462256 BARGINQ6ZT62 677 aa11.67□□□□□ -0.54
DDX39B-215ENST00000462256 BCL2L13Q9BXK5 485 aa11.67□□□□□ -0.54
DDX39B-215ENST00000462256 ZNF219Q9P2Y4 722 aaPredicted RBP11.67□□□□□ -0.54
DDX39B-215ENST00000462256 CRB1P82279 1406 aa11.67□□□□□ -0.54
DDX39B-215ENST00000462256 RNMTO43148 476 aaKnown RBP11.67□□□□□ -0.54
DDX39B-215ENST00000462256 NBPF5PQ86XG9 351 aaPredicted RBP11.67□□□□□ -0.54
DDX39B-215ENST00000462256 ATF5Q9Y2D1 282 aaPredicted RBP11.67□□□□□ -0.54
DDX39B-215ENST00000462256 ASXL1Q8IXJ9 1541 aa11.67□□□□□ -0.54
DDX39B-215ENST00000462256 RTL1A6NKG5 1358 aa11.66□□□□□ -0.54
DDX39B-215ENST00000462256 TWISTNBQ3B726 338 aaPredicted RBP11.66□□□□□ -0.54
DDX39B-215ENST00000462256 VPS37DQ86XT2 251 aa11.66□□□□□ -0.54
DDX39B-215ENST00000462256 ST5P78524 1137 aa11.66□□□□□ -0.54
DDX39B-215ENST00000462256 R3HDM1Q15032 1099 aaKnown RBP11.66□□□□□ -0.54
DDX39B-215ENST00000462256 ITPRIPQ8IWB1 547 aa11.66□□□□□ -0.54
DDX39B-215ENST00000462256 CLUAP1Q96AJ1 413 aa11.66□□□□□ -0.54
DDX39B-215ENST00000462256 LAMC1P11047 1609 aa11.66□□□□□ -0.54
DDX39B-215ENST00000462256 HTATSF1O43719 755 aaKnown RBP11.65□□□□□ -0.54
DDX39B-215ENST00000462256 PHKG2P15735 406 aa11.65□□□□□ -0.54
DDX39B-215ENST00000462256 IQSEC2Q5JU85 1478 aa11.65□□□□□ -0.54
DDX39B-215ENST00000462256 LOC102724428A0A0B4J2F2 783 aa11.65□□□□□ -0.54
DDX39B-215ENST00000462256 SIK1P57059 783 aa11.65□□□□□ -0.54
DDX39B-215ENST00000462256 RPGRQ92834 1020 aaKnown RBP11.65□□□□□ -0.54
DDX39B-215ENST00000462256 SPON1Q9HCB6 807 aa11.65□□□□□ -0.54
DDX39B-215ENST00000462256 CDC42BPGQ6DT37 1551 aa11.65□□□□□ -0.54
DDX39B-215ENST00000462256 NRXN1Q9ULB1 1477 aa11.65□□□□□ -0.54
DDX39B-215ENST00000462256 IL13P35225 146 aa11.65□□□□□ -0.54
DDX39B-215ENST00000462256 KIF24Q5T7B8 1368 aa11.65□□□□□ -0.55
DDX39B-215ENST00000462256 TXNRD1Q16881 649 aa11.64□□□□□ -0.55
DDX39B-215ENST00000462256 API5Q9BZZ5 524 aaKnown RBP11.64□□□□□ -0.55
DDX39B-215ENST00000462256 ZBTB3Q9H5J0 574 aa11.64□□□□□ -0.55
DDX39B-215ENST00000462256 GPTP24298 496 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms