RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 PNPLA7Q6ZV29 1317 aa15.43■□□□□ 0.06
CBX3-205ENST00000462165 RGPD2P0DJD1 1756 aa15.42■□□□□ 0.06
CBX3-205ENST00000462165 SENP3-EIF4A1A0A087X0R7 540 aa15.42■□□□□ 0.06
CBX3-205ENST00000462165 POLD1P28340 1107 aa15.42■□□□□ 0.06
CBX3-205ENST00000462165 GPR162Q16538 588 aa15.42■□□□□ 0.06
CBX3-205ENST00000462165 DDX54Q8TDD1 881 aaKnown RBP15.42■□□□□ 0.06
CBX3-205ENST00000462165 PUS7Q96PZ0 661 aaKnown RBP15.42■□□□□ 0.06
CBX3-205ENST00000462165 CARD11Q9BXL7 1154 aa15.42■□□□□ 0.06
CBX3-205ENST00000462165 CEP350Q5VT06 3117 aa15.4■□□□□ 0.06
CBX3-205ENST00000462165 ANKRD36BQ8N2N9 1353 aa15.4■□□□□ 0.06
CBX3-205ENST00000462165 KLHL34Q8N239 644 aa15.39■□□□□ 0.05
CBX3-205ENST00000462165 LTV1Q96GA3 475 aaPredicted RBP15.39■□□□□ 0.05
CBX3-205ENST00000462165 TFCP2L1Q9NZI6 479 aa15.39■□□□□ 0.05
CBX3-205ENST00000462165 NSD2O96028 1365 aa15.38■□□□□ 0.05
CBX3-205ENST00000462165 PRIM1P49642 420 aaKnown RBP15.38■□□□□ 0.05
CBX3-205ENST00000462165 SYTL4Q96C24 671 aaPredicted RBP15.38■□□□□ 0.05
CBX3-205ENST00000462165 HOXC9P31274 260 aa15.37■□□□□ 0.05
CBX3-205ENST00000462165 KCNQ4P56696 695 aa15.37■□□□□ 0.05
CBX3-205ENST00000462165 MAP3K19Q56UN5 1328 aa15.37■□□□□ 0.05
CBX3-205ENST00000462165 GIGYF1O75420 1035 aaPredicted RBP15.36■□□□□ 0.05
CBX3-205ENST00000462165 NLGN2Q8NFZ4 835 aa15.36■□□□□ 0.05
CBX3-205ENST00000462165 ZCRB1Q8TBF4 217 aaKnown RBP15.36■□□□□ 0.05
CBX3-205ENST00000462165 COG3Q96JB2 828 aa15.36■□□□□ 0.05
CBX3-205ENST00000462165 MEGF6O75095 1541 aa15.36■□□□□ 0.05
CBX3-205ENST00000462165 PELP1Q8IZL8 1130 aaKnown RBP15.35■□□□□ 0.05
CBX3-205ENST00000462165 AMPHP49418 695 aa15.34■□□□□ 0.05
CBX3-205ENST00000462165 CCNL1Q9UK58 526 aaPredicted RBP15.34■□□□□ 0.05
CBX3-205ENST00000462165 TAF1LQ8IZX4 1826 aa15.33■□□□□ 0.05
CBX3-205ENST00000462165 C5P01031 1676 aa15.33■□□□□ 0.04
CBX3-205ENST00000462165 RTL1A6NKG5 1358 aa15.33■□□□□ 0.04
CBX3-205ENST00000462165 GRIN3BO60391 1043 aa15.32■□□□□ 0.04
CBX3-205ENST00000462165 FBLN1P23142 703 aa15.32■□□□□ 0.04
CBX3-205ENST00000462165 COL23A1Q86Y22 540 aaPredicted RBP15.32■□□□□ 0.04
CBX3-205ENST00000462165 TESK2Q96S53 571 aa15.32■□□□□ 0.04
CBX3-205ENST00000462165 CGNL1Q0VF96 1302 aa15.32■□□□□ 0.04
CBX3-205ENST00000462165 USP47Q96K76 1375 aa15.32■□□□□ 0.04
CBX3-205ENST00000462165 YBX3P16989 372 aaKnown RBP eCLIP15.31■□□□□ 0.04
CBX3-205ENST00000462165 NBPF6Q5VWK0 638 aa15.3■□□□□ 0.04
CBX3-205ENST00000462165 NBPF4Q96M43 638 aa15.3■□□□□ 0.04
CBX3-205ENST00000462165 TONSLQ96HA7 1378 aa15.29■□□□□ 0.04
CBX3-205ENST00000462165 SLC24A1O60721 1099 aa15.29■□□□□ 0.04
CBX3-205ENST00000462165 ST20-MTHFSA0A0A6YYL1 179 aa15.28■□□□□ 0.04
CBX3-205ENST00000462165 HMGB2P26583 209 aaKnown RBP15.28■□□□□ 0.04
CBX3-205ENST00000462165 ITGB4P16144 1822 aa15.28■□□□□ 0.04
CBX3-205ENST00000462165 SMG6Q86US8 1419 aaKnown RBP15.27■□□□□ 0.04
CBX3-205ENST00000462165 RRS1Q15050 365 aaKnown RBP15.27■□□□□ 0.04
CBX3-205ENST00000462165 USHBP1Q8N6Y0 703 aa15.27■□□□□ 0.04
CBX3-205ENST00000462165 FLAD1Q8NFF5 587 aa15.27■□□□□ 0.04
CBX3-205ENST00000462165 RAPGEF4Q8WZA2 1011 aa15.27■□□□□ 0.04
CBX3-205ENST00000462165 CD2APQ9Y5K6 639 aa15.27■□□□□ 0.04
CBX3-205ENST00000462165 TOGARAM1Q9Y4F4 1720 aa15.26■□□□□ 0.03
CBX3-205ENST00000462165 FYB1O15117 783 aa15.26■□□□□ 0.03
CBX3-205ENST00000462165 MSL1Q68DK7 614 aa15.26■□□□□ 0.03
CBX3-205ENST00000462165 KIF20BQ96Q89 1820 aa15.26■□□□□ 0.03
CBX3-205ENST00000462165 C4BP0C0L5 1744 aa15.26■□□□□ 0.03
CBX3-205ENST00000462165 UBR3Q6ZT12 1888 aa15.25■□□□□ 0.03
CBX3-205ENST00000462165 PCDH11XQ9BZA7 1347 aa15.25■□□□□ 0.03
CBX3-205ENST00000462165 PCDH11YQ9BZA8 1340 aa15.25■□□□□ 0.03
CBX3-205ENST00000462165 TATP17735 454 aaPredicted RBP15.25■□□□□ 0.03
CBX3-205ENST00000462165 PKD1L3Q7Z443 1732 aa15.25■□□□□ 0.03
CBX3-205ENST00000462165 ATP10DQ9P241 1426 aa15.25■□□□□ 0.03
CBX3-205ENST00000462165 INSRP06213 1382 aa15.24■□□□□ 0.03
CBX3-205ENST00000462165 PALLDQ8WX93 1383 aa15.24■□□□□ 0.03
CBX3-205ENST00000462165 GGNBP2Q9H3C7 697 aa15.24■□□□□ 0.03
CBX3-205ENST00000462165 KIF24Q5T7B8 1368 aa15.24■□□□□ 0.03
CBX3-205ENST00000462165 IFFO2Q5TF58 517 aa15.23■□□□□ 0.03
CBX3-205ENST00000462165 FLT4P35916 1363 aa15.23■□□□□ 0.03
CBX3-205ENST00000462165 MAP2P11137 1827 aaKnown RBP15.22■□□□□ 0.03
CBX3-205ENST00000462165 CYP27B1O15528 508 aa15.22■□□□□ 0.03
CBX3-205ENST00000462165 HSP90AB2PQ58FF8 381 aa15.22■□□□□ 0.03
CBX3-205ENST00000462165 ADCY9O60503 1353 aa15.22■□□□□ 0.03
CBX3-205ENST00000462165 MPRIPQ6WCQ1 1025 aa15.21■□□□□ 0.03
CBX3-205ENST00000462165 SMARCC1Q92922 1105 aaPredicted RBP15.21■□□□□ 0.03
CBX3-205ENST00000462165 NSD3Q9BZ95 1437 aa15.2■□□□□ 0.02
CBX3-205ENST00000462165 TMF1P82094 1093 aa15.2■□□□□ 0.02
CBX3-205ENST00000462165 GPBP1L1Q9HC44 474 aaPredicted RBP15.2■□□□□ 0.02
CBX3-205ENST00000462165 NCAPD2Q15021 1401 aa15.19■□□□□ 0.02
CBX3-205ENST00000462165 AK7Q96M32 723 aa15.19■□□□□ 0.02
CBX3-205ENST00000462165 ANKRD26Q9UPS8 1709 aa15.18■□□□□ 0.02
CBX3-205ENST00000462165 C1QBPQ07021 282 aaKnown RBP15.18■□□□□ 0.02
CBX3-205ENST00000462165 NKX1-1Q15270 411 aaPredicted RBP15.18■□□□□ 0.02
CBX3-205ENST00000462165 AMIGO3Q86WK7 504 aa15.18■□□□□ 0.02
CBX3-205ENST00000462165 IGSF1Q8N6C5 1336 aa15.17■□□□□ 0.02
CBX3-205ENST00000462165 SSFA2P28290 1259 aa15.17■□□□□ 0.02
CBX3-205ENST00000462165 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.16■□□□□ 0.02
CBX3-205ENST00000462165 PIGBQ92521 554 aa15.16■□□□□ 0.02
CBX3-205ENST00000462165 KIF13BQ9NQT8 1826 aa15.15■□□□□ 0.02
CBX3-205ENST00000462165 PHF14O94880 888 aa15.15■□□□□ 0.02
CBX3-205ENST00000462165 HSPA6P17066 643 aa15.15■□□□□ 0.02
CBX3-205ENST00000462165 EMILIN1Q9Y6C2 1016 aa15.15■□□□□ 0.02
CBX3-205ENST00000462165 CICQ96RK0 1608 aaPredicted RBP15.14■□□□□ 0.01
CBX3-205ENST00000462165 LOC102724428A0A0B4J2F2 783 aa15.14■□□□□ 0.01
CBX3-205ENST00000462165 SIK1P57059 783 aa15.14■□□□□ 0.01
CBX3-205ENST00000462165 NCBP3Q53F19 620 aaKnown RBP15.14■□□□□ 0.01
CBX3-205ENST00000462165 CDCA8Q53HL2 280 aa15.14■□□□□ 0.01
CBX3-205ENST00000462165 SMIM5Q71RC9 77 aa15.14■□□□□ 0.01
CBX3-205ENST00000462165 LINC00116Q8NCU8 138 aa15.14■□□□□ 0.01
CBX3-205ENST00000462165 SPG7Q9UQ90 795 aa15.14■□□□□ 0.01
CBX3-205ENST00000462165 ZNF526Q8TF50 670 aaPredicted RBP15.13■□□□□ 0.01
CBX3-205ENST00000462165 KIAA1551Q9HCM1 1747 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms