RNA–Protein interactions for RNA: ENST00000461778.5

NR1H3-215, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-215ENST00000461778 RGS12O14924 1447 aa16.96■□□□□ 0.31
NR1H3-215ENST00000461778 SLIT2O94813 1529 aa16.96■□□□□ 0.31
NR1H3-215ENST00000461778 NUTM2GQ5VZR2 741 aa16.96■□□□□ 0.31
NR1H3-215ENST00000461778 AEBP1Q8IUX7 1158 aa16.96■□□□□ 0.31
NR1H3-215ENST00000461778 IP6K1Q92551 441 aa16.96■□□□□ 0.31
NR1H3-215ENST00000461778 EYA1Q99502 592 aa16.96■□□□□ 0.31
NR1H3-215ENST00000461778 USP19O94966 1318 aa16.96■□□□□ 0.3
NR1H3-215ENST00000461778 SOX12O15370 315 aa16.95■□□□□ 0.3
NR1H3-215ENST00000461778 EXOSC9Q06265 439 aaKnown RBP16.94■□□□□ 0.3
NR1H3-215ENST00000461778 VPS72Q15906 364 aa16.94■□□□□ 0.3
NR1H3-215ENST00000461778 IFT57Q9NWB7 429 aa16.94■□□□□ 0.3
NR1H3-215ENST00000461778 TSR2Q969E8 191 aaKnown RBP16.93■□□□□ 0.3
NR1H3-215ENST00000461778 GNAI1P63096 354 aa16.92■□□□□ 0.3
NR1H3-215ENST00000461778 ZNF428Q96B54 188 aa16.92■□□□□ 0.3
NR1H3-215ENST00000461778 CCDC9Q9Y3X0 531 aaKnown RBP16.92■□□□□ 0.3
NR1H3-215ENST00000461778 GCP02774 474 aa16.91■□□□□ 0.3
NR1H3-215ENST00000461778 ARHGEF25Q86VW2 580 aa16.91■□□□□ 0.3
NR1H3-215ENST00000461778 BTG4Q9NY30 223 aa16.91■□□□□ 0.3
NR1H3-215ENST00000461778 ONECUT3O60422 494 aaPredicted RBP16.9■□□□□ 0.3
NR1H3-215ENST00000461778 CFAP44Q96MT7 982 aa16.9■□□□□ 0.3
NR1H3-215ENST00000461778 TSHZ2Q9NRE2 1034 aa16.9■□□□□ 0.3
NR1H3-215ENST00000461778 BRPF1P55201 1214 aaPredicted RBP16.89■□□□□ 0.29
NR1H3-215ENST00000461778 PRDM11Q9NQV5 511 aa16.89■□□□□ 0.29
NR1H3-215ENST00000461778 HTATSF1O43719 755 aaKnown RBP16.88■□□□□ 0.29
NR1H3-215ENST00000461778 ALDH1L2Q3SY69 923 aa16.88■□□□□ 0.29
NR1H3-215ENST00000461778 THUMPD2Q9BTF0 503 aaKnown RBP16.88■□□□□ 0.29
NR1H3-215ENST00000461778 NCAPD2Q15021 1401 aa16.87■□□□□ 0.29
NR1H3-215ENST00000461778 ZC3H6P61129 1189 aaKnown RBP16.87■□□□□ 0.29
NR1H3-215ENST00000461778 CCDC125Q86Z20 511 aa16.87■□□□□ 0.29
NR1H3-215ENST00000461778 SEPT12Q8IYM1 358 aa16.87■□□□□ 0.29
NR1H3-215ENST00000461778 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.87■□□□□ 0.29
NR1H3-215ENST00000461778 RGPD2P0DJD1 1756 aa16.87■□□□□ 0.29
NR1H3-215ENST00000461778 CHL1O00533 1208 aa16.86■□□□□ 0.29
NR1H3-215ENST00000461778 VAMP4O75379 141 aa16.86■□□□□ 0.29
NR1H3-215ENST00000461778 AAMPQ13685 434 aa16.86■□□□□ 0.29
NR1H3-215ENST00000461778 MTHFSDQ2M296 383 aaKnown RBP16.86■□□□□ 0.29
NR1H3-215ENST00000461778 GAS2L2Q8NHY3 880 aa16.86■□□□□ 0.29
NR1H3-215ENST00000461778 CRYBG1Q9Y4K1 1723 aa16.86■□□□□ 0.29
NR1H3-215ENST00000461778 CRB1P82279 1406 aa16.86■□□□□ 0.29
NR1H3-215ENST00000461778 CAMTA1Q9Y6Y1 1673 aa16.85■□□□□ 0.29
NR1H3-215ENST00000461778 SSH1Q8WYL5 1049 aa16.85■□□□□ 0.29
NR1H3-215ENST00000461778 MBIPQ9NS73 344 aa16.85■□□□□ 0.29
NR1H3-215ENST00000461778 COL18A1P39060 1754 aa16.84■□□□□ 0.29
NR1H3-215ENST00000461778 MS4A1P11836 297 aa16.84■□□□□ 0.29
NR1H3-215ENST00000461778 CHRNA2Q15822 529 aa16.84■□□□□ 0.29
NR1H3-215ENST00000461778 KIAA0232Q92628 1395 aa16.84■□□□□ 0.29
NR1H3-215ENST00000461778 NWD2Q9ULI1 1742 aa16.84■□□□□ 0.29
NR1H3-215ENST00000461778 RGPD5Q99666 1765 aa16.84■□□□□ 0.29
NR1H3-215ENST00000461778 GLI3P10071 1580 aa16.83■□□□□ 0.28
NR1H3-215ENST00000461778 DCTN1Q14203 1278 aa16.83■□□□□ 0.28
NR1H3-215ENST00000461778 ZKSCAN2Q63HK3 967 aa16.83■□□□□ 0.28
NR1H3-215ENST00000461778 ABCA3Q99758 1704 aa16.82■□□□□ 0.28
NR1H3-215ENST00000461778 LRRC37A3O60309 1634 aa16.82■□□□□ 0.28
NR1H3-215ENST00000461778 KDM2BQ8NHM5 1336 aa16.82■□□□□ 0.28
NR1H3-215ENST00000461778 EVA1CP58658 441 aa16.82■□□□□ 0.28
NR1H3-215ENST00000461778 NBPF6Q5VWK0 638 aa16.82■□□□□ 0.28
NR1H3-215ENST00000461778 FRAT1Q92837 279 aaPredicted RBP16.82■□□□□ 0.28
NR1H3-215ENST00000461778 NBPF4Q96M43 638 aa16.82■□□□□ 0.28
NR1H3-215ENST00000461778 LAS1LQ9Y4W2 734 aaKnown RBP16.82■□□□□ 0.28
NR1H3-215ENST00000461778 ABCC6O95255 1503 aa16.81■□□□□ 0.28
NR1H3-215ENST00000461778 SPATA31A5Q5VU36 1347 aa16.81■□□□□ 0.28
NR1H3-215ENST00000461778 SPATA31A7Q8IWB4 1347 aa16.81■□□□□ 0.28
NR1H3-215ENST00000461778 CANXP27824 592 aaKnown RBP16.81■□□□□ 0.28
NR1H3-215ENST00000461778 FAM98CQ17RN3 349 aaKnown RBP16.81■□□□□ 0.28
NR1H3-215ENST00000461778 KRT27Q7Z3Y8 459 aa16.81■□□□□ 0.28
NR1H3-215ENST00000461778 PANK1Q8TE04 598 aa16.81■□□□□ 0.28
NR1H3-215ENST00000461778 LTV1Q96GA3 475 aaPredicted RBP16.81■□□□□ 0.28
NR1H3-215ENST00000461778 SMC4Q9NTJ3 1288 aa16.81■□□□□ 0.28
NR1H3-215ENST00000461778 COL14A1Q05707 1796 aaKnown RBP16.81■□□□□ 0.28
NR1H3-215ENST00000461778 A0A0G2JS52 829 aa16.8■□□□□ 0.28
NR1H3-215ENST00000461778 RLBP1P12271 317 aa16.8■□□□□ 0.28
NR1H3-215ENST00000461778 MYT1Q01538 1121 aa16.8■□□□□ 0.28
NR1H3-215ENST00000461778 MCM10Q7L590 875 aa16.8■□□□□ 0.28
NR1H3-215ENST00000461778 TSPYL6Q8N831 410 aa16.8■□□□□ 0.28
NR1H3-215ENST00000461778 BCL2L13Q9BXK5 485 aa16.8■□□□□ 0.28
NR1H3-215ENST00000461778 LMO7Q8WWI1 1683 aa16.8■□□□□ 0.28
NR1H3-215ENST00000461778 PLCH1Q4KWH8 1693 aa16.79■□□□□ 0.28
NR1H3-215ENST00000461778 KIF16BQ96L93 1317 aa16.79■□□□□ 0.28
NR1H3-215ENST00000461778 IPO8O15397 1037 aaKnown RBP16.79■□□□□ 0.28
NR1H3-215ENST00000461778 MRPL50Q8N5N7 158 aaKnown RBP16.79■□□□□ 0.28
NR1H3-215ENST00000461778 C8orf58Q8NAV2 365 aa16.79■□□□□ 0.28
NR1H3-215ENST00000461778 ARHGAP45Q92619 1136 aa16.79■□□□□ 0.28
NR1H3-215ENST00000461778 STRN4Q9NRL3 753 aa16.79■□□□□ 0.28
NR1H3-215ENST00000461778 TNNQ9UQP3 1299 aa16.79■□□□□ 0.28
NR1H3-215ENST00000461778 COG6Q9Y2V7 657 aa16.79■□□□□ 0.28
NR1H3-215ENST00000461778 GNAT3A8MTJ3 354 aa16.78■□□□□ 0.28
NR1H3-215ENST00000461778 ATF7IPQ6VMQ6 1270 aa16.78■□□□□ 0.28
NR1H3-215ENST00000461778 CENPQQ7L2Z9 268 aaPredicted RBP16.78■□□□□ 0.28
NR1H3-215ENST00000461778 DZIP1LQ8IYY4 767 aaKnown RBP16.78■□□□□ 0.28
NR1H3-215ENST00000461778 RTF1Q92541 710 aaKnown RBP16.78■□□□□ 0.28
NR1H3-215ENST00000461778 BABAM1Q9NWV8 329 aa16.78■□□□□ 0.28
NR1H3-215ENST00000461778 CPDO75976 1380 aa16.77■□□□□ 0.28
NR1H3-215ENST00000461778 TWISTNBQ3B726 338 aaPredicted RBP16.77■□□□□ 0.28
NR1H3-215ENST00000461778 ANKRD24Q8TF21 1146 aa16.77■□□□□ 0.28
NR1H3-215ENST00000461778 NOB1Q9ULX3 412 aaKnown RBP16.77■□□□□ 0.28
NR1H3-215ENST00000461778 AXIN2Q9Y2T1 843 aa16.77■□□□□ 0.28
NR1H3-215ENST00000461778 MAP3K5Q99683 1374 aa16.77■□□□□ 0.27
NR1H3-215ENST00000461778 SPATA31A1Q5TZJ5 1347 aa16.76■□□□□ 0.27
NR1H3-215ENST00000461778 TRIM27P14373 513 aa16.76■□□□□ 0.27
NR1H3-215ENST00000461778 MVPQ14764 893 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms