RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 TTLL12Q14166 644 aaPredicted RBP9.03□□□□□ -0.96
SPTA1-202ENST00000461624 CCDC24Q8N4L8 307 aa9.03□□□□□ -0.96
SPTA1-202ENST00000461624 ZC3H15Q8WU90 426 aaKnown RBP9.03□□□□□ -0.96
SPTA1-202ENST00000461624 ATP7AQ04656 1500 aa9.03□□□□□ -0.96
SPTA1-202ENST00000461624 NPHP4O75161 1426 aaPredicted RBP9.03□□□□□ -0.96
SPTA1-202ENST00000461624 POTECB2RU33 542 aa9.02□□□□□ -0.97
SPTA1-202ENST00000461624 MRGPRX2Q96LB1 330 aa9.02□□□□□ -0.97
SPTA1-202ENST00000461624 EP400Q96L91 3159 aa9.02□□□□□ -0.97
SPTA1-202ENST00000461624 FAM135BQ49AJ0 1406 aa9.02□□□□□ -0.97
SPTA1-202ENST00000461624 SYMPKQ92797 1274 aaKnown RBP9.01□□□□□ -0.97
SPTA1-202ENST00000461624 PCDHGC3Q9UN70 934 aa9.01□□□□□ -0.97
SPTA1-202ENST00000461624 A2MP01023 1474 aa9.01□□□□□ -0.97
SPTA1-202ENST00000461624 SYCP2Q9BX26 1530 aa9□□□□□ -0.97
SPTA1-202ENST00000461624 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9□□□□□ -0.97
SPTA1-202ENST00000461624 SMPD1P17405 629 aa9□□□□□ -0.97
SPTA1-202ENST00000461624 SPIRE2Q8WWL2 714 aa9□□□□□ -0.97
SPTA1-202ENST00000461624 NUDT12Q9BQG2 462 aa9□□□□□ -0.97
SPTA1-202ENST00000461624 PZPP20742 1482 aa9□□□□□ -0.97
SPTA1-202ENST00000461624 TNRQ92752 1358 aa8.99□□□□□ -0.97
SPTA1-202ENST00000461624 C6orf229H3BNL8 230 aa8.99□□□□□ -0.97
SPTA1-202ENST00000461624 GIGYF2Q6Y7W6 1299 aaKnown RBP8.99□□□□□ -0.97
SPTA1-202ENST00000461624 CLIP1P30622 1438 aa8.98□□□□□ -0.97
SPTA1-202ENST00000461624 ROBO1Q9Y6N7 1651 aa8.98□□□□□ -0.97
SPTA1-202ENST00000461624 NLRP1Q9C000 1473 aa8.98□□□□□ -0.97
SPTA1-202ENST00000461624 SKOR1P84550 965 aa8.98□□□□□ -0.97
SPTA1-202ENST00000461624 RC3H1Q5TC82 1133 aaKnown RBP8.98□□□□□ -0.97
SPTA1-202ENST00000461624 ANKLE2Q86XL3 938 aa8.98□□□□□ -0.97
SPTA1-202ENST00000461624 FAM135AQ9P2D6 1515 aa8.98□□□□□ -0.97
SPTA1-202ENST00000461624 UGGT1Q9NYU2 1555 aa8.98□□□□□ -0.97
SPTA1-202ENST00000461624 ADGBQ8N7X0 1667 aa8.97□□□□□ -0.97
SPTA1-202ENST00000461624 MS4A1P11836 297 aa8.97□□□□□ -0.97
SPTA1-202ENST00000461624 DIXDC1Q155Q3 683 aa8.97□□□□□ -0.97
SPTA1-202ENST00000461624 CDK11AQ9UQ88 783 aaPredicted RBP8.97□□□□□ -0.97
SPTA1-202ENST00000461624 FMN1Q68DA7 1419 aa8.97□□□□□ -0.97
SPTA1-202ENST00000461624 MOXD2PA6NHM9 499 aa8.96□□□□□ -0.98
SPTA1-202ENST00000461624 SPDYE5A6NIY4 337 aa8.96□□□□□ -0.98
SPTA1-202ENST00000461624 CCNYL3P0C7X3 344 aa8.96□□□□□ -0.98
SPTA1-202ENST00000461624 GJA5P36382 358 aa8.96□□□□□ -0.98
SPTA1-202ENST00000461624 RANGAP1P46060 587 aaPredicted RBP8.96□□□□□ -0.98
SPTA1-202ENST00000461624 PTPRNQ16849 979 aa8.96□□□□□ -0.98
SPTA1-202ENST00000461624 TPRNQ4KMQ1 711 aa8.96□□□□□ -0.98
SPTA1-202ENST00000461624 FBXO31Q5XUX0 539 aaPredicted RBP8.96□□□□□ -0.98
SPTA1-202ENST00000461624 DACH1Q9UI36 760 aa8.96□□□□□ -0.98
SPTA1-202ENST00000461624 SPAG9O60271 1321 aaKnown RBP8.96□□□□□ -0.98
SPTA1-202ENST00000461624 J3QL48 77 aa8.95□□□□□ -0.98
SPTA1-202ENST00000461624 GMPR2Q9P2T1 348 aaKnown RBP8.95□□□□□ -0.98
SPTA1-202ENST00000461624 MIA2Q96PC5 1412 aa8.95□□□□□ -0.98
SPTA1-202ENST00000461624 KIAA1107Q9UPP5 1409 aa8.95□□□□□ -0.98
SPTA1-202ENST00000461624 MAP3K1Q13233 1512 aa8.95□□□□□ -0.98
SPTA1-202ENST00000461624 KDM5DQ9BY66 1539 aa8.95□□□□□ -0.98
SPTA1-202ENST00000461624 LRP6O75581 1613 aa8.94□□□□□ -0.98
SPTA1-202ENST00000461624 NDUFV2P19404 249 aa8.94□□□□□ -0.98
SPTA1-202ENST00000461624 MTMR2Q13614 643 aa8.94□□□□□ -0.98
SPTA1-202ENST00000461624 DESI1Q6ICB0 168 aa8.94□□□□□ -0.98
SPTA1-202ENST00000461624 GGT6Q6P531 493 aa8.94□□□□□ -0.98
SPTA1-202ENST00000461624 BEGAINQ9BUH8 593 aa8.94□□□□□ -0.98
SPTA1-202ENST00000461624 ARHGAP35Q9NRY4 1499 aa8.94□□□□□ -0.98
SPTA1-202ENST00000461624 CDK12Q9NYV4 1490 aaPredicted RBP8.94□□□□□ -0.98
SPTA1-202ENST00000461624 PTCRAQ6ISU1 281 aaPredicted RBP8.93□□□□□ -0.98
SPTA1-202ENST00000461624 PARP9Q8IXQ6 854 aa8.93□□□□□ -0.98
SPTA1-202ENST00000461624 THEMISQ8N1K5 641 aaPredicted RBP8.93□□□□□ -0.98
SPTA1-202ENST00000461624 COL16A1Q07092 1604 aaPredicted RBP8.92□□□□□ -0.98
SPTA1-202ENST00000461624 GPATCH8Q9UKJ3 1502 aaKnown RBP8.92□□□□□ -0.98
SPTA1-202ENST00000461624 C11orf95C9JLR9 678 aaPredicted RBP8.92□□□□□ -0.98
SPTA1-202ENST00000461624 TRIM66O15016 1216 aa8.92□□□□□ -0.98
SPTA1-202ENST00000461624 PRR7Q8TB68 274 aa8.92□□□□□ -0.98
SPTA1-202ENST00000461624 ARHGAP23Q9P227 1491 aa8.91□□□□□ -0.98
SPTA1-202ENST00000461624 RSBN1LQ6PCB5 846 aaPredicted RBP8.91□□□□□ -0.98
SPTA1-202ENST00000461624 EHBP1Q8NDI1 1231 aa8.91□□□□□ -0.98
SPTA1-202ENST00000461624 AK7Q96M32 723 aa8.91□□□□□ -0.98
SPTA1-202ENST00000461624 TBC1D2Q9BYX2 928 aa8.91□□□□□ -0.98
SPTA1-202ENST00000461624 ATP13A2Q9NQ11 1180 aa8.91□□□□□ -0.98
SPTA1-202ENST00000461624 EVA1BQ9NVM1 165 aa8.91□□□□□ -0.98
SPTA1-202ENST00000461624 PHLPP1O60346 1717 aa8.91□□□□□ -0.98
SPTA1-202ENST00000461624 UBR1Q8IWV7 1749 aa8.91□□□□□ -0.98
SPTA1-202ENST00000461624 SCAF11Q99590 1463 aaKnown RBP8.9□□□□□ -0.98
SPTA1-202ENST00000461624 KCNH2Q12809 1159 aa8.9□□□□□ -0.98
SPTA1-202ENST00000461624 TREML4Q6UXN2 200 aa8.9□□□□□ -0.98
SPTA1-202ENST00000461624 HPS1Q92902 700 aa8.9□□□□□ -0.98
SPTA1-202ENST00000461624 UNC93B1Q9H1C4 597 aa8.9□□□□□ -0.98
SPTA1-202ENST00000461624 SENP2Q9HC62 589 aa8.9□□□□□ -0.98
SPTA1-202ENST00000461624 SLIT1O75093 1534 aa8.9□□□□□ -0.99
SPTA1-202ENST00000461624 NCOA2Q15596 1464 aa8.89□□□□□ -0.99
SPTA1-202ENST00000461624 LRRC9Q6ZRR7 1453 aa8.89□□□□□ -0.99
SPTA1-202ENST00000461624 PLEKHH2Q8IVE3 1493 aa8.89□□□□□ -0.99
SPTA1-202ENST00000461624 JCADQ9P266 1359 aa8.89□□□□□ -0.99
SPTA1-202ENST00000461624 SIAH2O43255 324 aa8.89□□□□□ -0.99
SPTA1-202ENST00000461624 ALDH1A1P00352 501 aa8.89□□□□□ -0.99
SPTA1-202ENST00000461624 HNRNPMP52272 730 aaKnown RBP eCLIP8.89□□□□□ -0.99
SPTA1-202ENST00000461624 SH3BP2P78314 561 aa8.89□□□□□ -0.99
SPTA1-202ENST00000461624 DHX29Q7Z478 1369 aaKnown RBP8.88□□□□□ -0.99
SPTA1-202ENST00000461624 SPTLC1O15269 473 aa8.88□□□□□ -0.99
SPTA1-202ENST00000461624 LCE2AQ5TA79 106 aaPredicted RBP8.88□□□□□ -0.99
SPTA1-202ENST00000461624 MBD5Q9P267 1494 aa8.88□□□□□ -0.99
SPTA1-202ENST00000461624 EEA1Q15075 1411 aa8.88□□□□□ -0.99
SPTA1-202ENST00000461624 TMEM94Q12767 1356 aa8.87□□□□□ -0.99
SPTA1-202ENST00000461624 SETBP1Q9Y6X0 1596 aa8.87□□□□□ -0.99
SPTA1-202ENST00000461624 PRPF38BQ5VTL8 546 aaKnown RBP8.87□□□□□ -0.99
SPTA1-202ENST00000461624 TRIM52Q96A61 297 aa8.87□□□□□ -0.99
SPTA1-202ENST00000461624 KIFC2Q96AC6 838 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 194.1 ms