RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 PER1O15534 1290 aaPredicted RBP27.82■■■□□ 2.04
SCAF8-204ENST00000461219 EIF4A2Q14240 407 aaKnown RBP27.81■■■□□ 2.04
SCAF8-204ENST00000461219 RGPD3A6NKT7 1758 aaPredicted RBP27.81■■■□□ 2.04
SCAF8-204ENST00000461219 RGPD4Q7Z3J3 1758 aa27.81■■■□□ 2.04
SCAF8-204ENST00000461219 CAMKK2Q96RR4 588 aa27.8■■■□□ 2.04
SCAF8-204ENST00000461219 RREB1Q92766 1687 aa27.8■■■□□ 2.04
SCAF8-204ENST00000461219 DOT1LQ8TEK3 1739 aa27.79■■■□□ 2.04
SCAF8-204ENST00000461219 EYA1Q99502 592 aa27.79■■■□□ 2.04
SCAF8-204ENST00000461219 BTAF1O14981 1849 aa27.78■■■□□ 2.04
SCAF8-204ENST00000461219 PCDH11XQ9BZA7 1347 aa27.77■■■□□ 2.04
SCAF8-204ENST00000461219 PCDH11YQ9BZA8 1340 aa27.77■■■□□ 2.04
SCAF8-204ENST00000461219 ZEB1P37275 1124 aaPredicted RBP27.77■■■□□ 2.04
SCAF8-204ENST00000461219 SYTL4Q96C24 671 aaPredicted RBP27.77■■■□□ 2.04
SCAF8-204ENST00000461219 NUP188Q5SRE5 1749 aa27.77■■■□□ 2.04
SCAF8-204ENST00000461219 PKD1L3Q7Z443 1732 aa27.75■■■□□ 2.03
SCAF8-204ENST00000461219 NPC1L1Q9UHC9 1359 aa27.75■■■□□ 2.03
SCAF8-204ENST00000461219 KCNQ2O43526 872 aa27.75■■■□□ 2.03
SCAF8-204ENST00000461219 NBPF14Q5TI25 921 aa27.75■■■□□ 2.03
SCAF8-204ENST00000461219 PTF1AQ7RTS3 328 aa27.75■■■□□ 2.03
SCAF8-204ENST00000461219 PLSCR1O15162 318 aa27.74■■■□□ 2.03
SCAF8-204ENST00000461219 SPG7Q9UQ90 795 aa27.74■■■□□ 2.03
SCAF8-204ENST00000461219 MTHFSP49914 203 aa27.73■■■□□ 2.03
SCAF8-204ENST00000461219 PSDA5PKW4 1024 aaPredicted RBP27.72■■■□□ 2.03
SCAF8-204ENST00000461219 NCAPD2Q15021 1401 aa27.71■■■□□ 2.03
SCAF8-204ENST00000461219 IGSF1Q8N6C5 1336 aa27.68■■■□□ 2.02
SCAF8-204ENST00000461219 R3HDM1Q15032 1099 aaKnown RBP27.68■■■□□ 2.02
SCAF8-204ENST00000461219 PRIM1P49642 420 aaKnown RBP27.67■■■□□ 2.02
SCAF8-204ENST00000461219 ITGB4P16144 1822 aa27.65■■■□□ 2.02
SCAF8-204ENST00000461219 DIAPH1O60610 1272 aaKnown RBP27.64■■■□□ 2.02
SCAF8-204ENST00000461219 TXNRD1Q16881 649 aa27.64■■■□□ 2.02
SCAF8-204ENST00000461219 SULT6B1Q6IMI4 303 aa27.64■■■□□ 2.02
SCAF8-204ENST00000461219 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.64■■■□□ 2.021e-10■□□□□ 10.7
SCAF8-204ENST00000461219 CFAP53Q96M91 514 aa27.63■■■□□ 2.01
SCAF8-204ENST00000461219 CYP27B1O15528 508 aa27.62■■■□□ 2.01
SCAF8-204ENST00000461219 IL13P35225 146 aa27.62■■■□□ 2.01
SCAF8-204ENST00000461219 PLEKHO1Q53GL0 409 aaPredicted RBP27.62■■■□□ 2.01
SCAF8-204ENST00000461219 IFNL2Q8IZJ0 200 aa27.62■■■□□ 2.01
SCAF8-204ENST00000461219 PLEKHG2Q9H7P9 1386 aa27.6■■■□□ 2.01
SCAF8-204ENST00000461219 AMOTQ4VCS5 1084 aa27.59■■■□□ 2.01
SCAF8-204ENST00000461219 AEBP1Q8IUX7 1158 aa27.59■■■□□ 2.01
SCAF8-204ENST00000461219 TOGARAM1Q9Y4F4 1720 aa27.58■■■□□ 2.01
SCAF8-204ENST00000461219 MPRIPQ6WCQ1 1025 aa27.58■■■□□ 2.01
SCAF8-204ENST00000461219 STK32BQ9NY57 414 aa27.58■■■□□ 2.01
SCAF8-204ENST00000461219 U2SURPO15042 1029 aaKnown RBP27.57■■■□□ 2
SCAF8-204ENST00000461219 ZNF530Q6P9A1 599 aaPredicted RBP27.57■■■□□ 2
SCAF8-204ENST00000461219 HMOX1P09601 288 aa27.56■■■□□ 2
SCAF8-204ENST00000461219 PHKG2P15735 406 aa27.56■■■□□ 2
SCAF8-204ENST00000461219 C1orf141Q5JVX7 400 aa27.56■■■□□ 2
SCAF8-204ENST00000461219 LY75O60449 1722 aa27.55■■■□□ 2
SCAF8-204ENST00000461219 DDX10Q13206 875 aaKnown RBP27.55■■■□□ 2
SCAF8-204ENST00000461219 PROM2Q8N271 834 aa27.55■■■□□ 2
SCAF8-204ENST00000461219 HSP90AB1P08238 724 aaKnown RBP27.54■■■□□ 2
SCAF8-204ENST00000461219 NKX1-1Q15270 411 aaPredicted RBP27.53■■■□□ 2
SCAF8-204ENST00000461219 KDRP35968 1356 aa27.52■■■□□ 2
SCAF8-204ENST00000461219 PPP2R1AP30153 589 aa27.52■■■□□ 2
SCAF8-204ENST00000461219 SLC27A3Q5K4L6 730 aa27.52■■■□□ 2
SCAF8-204ENST00000461219 TMOD3Q9NYL9 352 aa27.52■■■□□ 2
SCAF8-204ENST00000461219 VIRMAQ69YN4 1812 aaKnown RBP27.51■■□□□ 1.99
SCAF8-204ENST00000461219 NUDCQ9Y266 331 aa27.51■■□□□ 1.99
SCAF8-204ENST00000461219 ANO8Q9HCE9 1232 aaPredicted RBP27.5■■□□□ 1.99
SCAF8-204ENST00000461219 CCNL1Q9UK58 526 aaPredicted RBP27.49■■□□□ 1.99
SCAF8-204ENST00000461219 COL3A1P02461 1466 aaPredicted RBP27.49■■□□□ 1.99
SCAF8-204ENST00000461219 SMARCC1Q92922 1105 aaPredicted RBP27.48■■□□□ 1.99
SCAF8-204ENST00000461219 DCAF5Q96JK2 942 aa27.48■■□□□ 1.99
SCAF8-204ENST00000461219 LRP5O75197 1615 aa27.48■■□□□ 1.99
SCAF8-204ENST00000461219 SLC15A2Q16348 729 aa27.47■■□□□ 1.99
SCAF8-204ENST00000461219 HMGB2P26583 209 aaKnown RBP27.46■■□□□ 1.99
SCAF8-204ENST00000461219 PALLDQ8WX93 1383 aa27.46■■□□□ 1.99
SCAF8-204ENST00000461219 PIGBQ92521 554 aa27.45■■□□□ 1.98
SCAF8-204ENST00000461219 SCN11AQ9UI33 1791 aa27.45■■□□□ 1.98
SCAF8-204ENST00000461219 C5P01031 1676 aa27.44■■□□□ 1.98
SCAF8-204ENST00000461219 KCNQ4P56696 695 aa27.44■■□□□ 1.98
SCAF8-204ENST00000461219 LRRC4BQ9NT99 713 aa27.44■■□□□ 1.98
SCAF8-204ENST00000461219 PAPPAQ13219 1627 aa27.44■■□□□ 1.98
SCAF8-204ENST00000461219 ERVV-2B6SEH9 535 aa27.43■■□□□ 1.98
SCAF8-204ENST00000461219 CABP4P57796 275 aa27.43■■□□□ 1.98
SCAF8-204ENST00000461219 TAF1LQ8IZX4 1826 aa27.42■■□□□ 1.98
SCAF8-204ENST00000461219 U2AF1L5P0DN76 240 aaPredicted RBP27.41■■□□□ 1.98
SCAF8-204ENST00000461219 U2AF1Q01081 240 aaKnown RBP eCLIP27.41■■□□□ 1.982e-7■■□□□ 13
SCAF8-204ENST00000461219 AKAP4Q5JQC9 854 aa27.41■■□□□ 1.98
SCAF8-204ENST00000461219 CASZ1Q86V15 1759 aa27.4■■□□□ 1.98
SCAF8-204ENST00000461219 RALBP1Q15311 655 aa27.4■■□□□ 1.98
SCAF8-204ENST00000461219 TFCP2L1Q9NZI6 479 aa27.4■■□□□ 1.98
SCAF8-204ENST00000461219 QSER1Q2KHR3 1735 aa27.38■■□□□ 1.97
SCAF8-204ENST00000461219 SPON1Q9HCB6 807 aa27.38■■□□□ 1.97
SCAF8-204ENST00000461219 KDM6AO15550 1401 aaPredicted RBP27.38■■□□□ 1.97
SCAF8-204ENST00000461219 TUBGCP6Q96RT7 1819 aa27.37■■□□□ 1.97
SCAF8-204ENST00000461219 ZNF827Q17R98 1081 aa27.37■■□□□ 1.97
SCAF8-204ENST00000461219 MTHFSDQ2M296 383 aaKnown RBP27.36■■□□□ 1.97
SCAF8-204ENST00000461219 PPP1R1BQ9UD71 204 aaPredicted RBP27.36■■□□□ 1.97
SCAF8-204ENST00000461219 ASAP1Q9ULH1 1129 aa27.36■■□□□ 1.97
SCAF8-204ENST00000461219 NEFMP07197 916 aa27.35■■□□□ 1.97
SCAF8-204ENST00000461219 PRKAR2BP31323 418 aa27.35■■□□□ 1.97
SCAF8-204ENST00000461219 GAS2L2Q8NHY3 880 aa27.35■■□□□ 1.97
SCAF8-204ENST00000461219 ZBTB7AO95365 584 aa27.34■■□□□ 1.97
SCAF8-204ENST00000461219 LOC102724428A0A0B4J2F2 783 aa27.33■■□□□ 1.97
SCAF8-204ENST00000461219 MSH5O43196 834 aa27.33■■□□□ 1.97
SCAF8-204ENST00000461219 SIK1P57059 783 aa27.33■■□□□ 1.97
SCAF8-204ENST00000461219 AKT1S1Q96B36 256 aa27.33■■□□□ 1.97
SCAF8-204ENST00000461219 RBM42Q9BTD8 480 aaKnown RBP27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms