RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 ZKSCAN5Q9Y2L8 839 aa19.1■□□□□ 0.65
SSR4-206ENST00000460616 DYNC1I1O14576 645 aa19.09■□□□□ 0.65
SSR4-206ENST00000460616 NALCNQ8IZF0 1738 aa19.09■□□□□ 0.65
SSR4-206ENST00000460616 MCM5P33992 734 aa19.08■□□□□ 0.65
SSR4-206ENST00000460616 PLEKHF1Q96S99 279 aa19.08■□□□□ 0.64
SSR4-206ENST00000460616 U2SURPO15042 1029 aaKnown RBP19.07■□□□□ 0.64
SSR4-206ENST00000460616 IL16Q14005 1332 aa19.07■□□□□ 0.64
SSR4-206ENST00000460616 RABEP1Q15276 862 aa19.07■□□□□ 0.64
SSR4-206ENST00000460616 CABP2Q9NPB3 220 aa19.07■□□□□ 0.64
SSR4-206ENST00000460616 CDC45O75419 566 aa19.06■□□□□ 0.64
SSR4-206ENST00000460616 AEBP2Q6ZN18 517 aaPredicted RBP19.06■□□□□ 0.64
SSR4-206ENST00000460616 SMAP1Q8IYB5 467 aaPredicted RBP19.06■□□□□ 0.64
SSR4-206ENST00000460616 SIRT1Q96EB6 747 aa19.06■□□□□ 0.64
SSR4-206ENST00000460616 ZNF335Q9H4Z2 1342 aaPredicted RBP19.06■□□□□ 0.64
SSR4-206ENST00000460616 CYP2E1P05181 493 aaPredicted RBP19.06■□□□□ 0.64
SSR4-206ENST00000460616 PODXL2Q9NZ53 605 aa19.06■□□□□ 0.64
SSR4-206ENST00000460616 ADGRB2O60241 1585 aa19.05■□□□□ 0.64
SSR4-206ENST00000460616 PRPF40AO75400 957 aaKnown RBP19.05■□□□□ 0.64
SSR4-206ENST00000460616 ALDH1L2Q3SY69 923 aa19.05■□□□□ 0.64
SSR4-206ENST00000460616 ZBTB7BO15156 539 aaPredicted RBP19.05■□□□□ 0.64
SSR4-206ENST00000460616 PPIP5K1Q6PFW1 1433 aa19.04■□□□□ 0.64
SSR4-206ENST00000460616 CCDC39Q9UFE4 941 aa19.04■□□□□ 0.64
SSR4-206ENST00000460616 EVC2Q86UK5 1308 aa19.04■□□□□ 0.64
SSR4-206ENST00000460616 SASS6Q6UVJ0 657 aa19.03■□□□□ 0.64
SSR4-206ENST00000460616 CHMP4BQ9H444 224 aaKnown RBP19.03■□□□□ 0.64
SSR4-206ENST00000460616 XIRP1Q702N8 1843 aaKnown RBP19.03■□□□□ 0.64
SSR4-206ENST00000460616 PKP1Q13835 747 aa19.03■□□□□ 0.64
SSR4-206ENST00000460616 ARID3AQ99856 593 aa19.03■□□□□ 0.64
SSR4-206ENST00000460616 CWC22Q9HCG8 908 aaKnown RBP19.03■□□□□ 0.64
SSR4-206ENST00000460616 GPT2Q8TD30 523 aa19.02■□□□□ 0.64
SSR4-206ENST00000460616 CDK19Q9BWU1 502 aa19.02■□□□□ 0.64
SSR4-206ENST00000460616 RBM27Q9P2N5 1060 aaKnown RBP19.02■□□□□ 0.64
SSR4-206ENST00000460616 RGPD8O14715 1765 aaPredicted RBP19.02■□□□□ 0.64
SSR4-206ENST00000460616 SRPK2P78362 688 aaKnown RBP19.02■□□□□ 0.64
SSR4-206ENST00000460616 C1orf115Q9H7X2 142 aa19.02■□□□□ 0.64
SSR4-206ENST00000460616 NUTM2FA1L443 756 aa19.01■□□□□ 0.63
SSR4-206ENST00000460616 LRSAM1Q6UWE0 723 aa19.01■□□□□ 0.63
SSR4-206ENST00000460616 WASLO00401 505 aaPredicted RBP19■□□□□ 0.63
SSR4-206ENST00000460616 NSD2O96028 1365 aa19■□□□□ 0.63
SSR4-206ENST00000460616 PROSER2Q86WR7 435 aaPredicted RBP18.99■□□□□ 0.63
SSR4-206ENST00000460616 USP32Q8NFA0 1604 aa18.99■□□□□ 0.63
SSR4-206ENST00000460616 CFAP44Q96MT7 982 aa18.99■□□□□ 0.63
SSR4-206ENST00000460616 SYCE3A1L190 88 aa18.98■□□□□ 0.63
SSR4-206ENST00000460616 SIRT2Q8IXJ6 389 aa18.98■□□□□ 0.63
SSR4-206ENST00000460616 USP26Q9BXU7 913 aa18.98■□□□□ 0.63
SSR4-206ENST00000460616 TMEM63CQ9P1W3 806 aa18.98■□□□□ 0.63
SSR4-206ENST00000460616 TMEM94Q12767 1356 aa18.97■□□□□ 0.63
SSR4-206ENST00000460616 GSPT1P15170 499 aaKnown RBP18.97■□□□□ 0.63
SSR4-206ENST00000460616 BRPF1P55201 1214 aaPredicted RBP18.97■□□□□ 0.63
SSR4-206ENST00000460616 PRR36Q9H6K5 1346 aa18.97■□□□□ 0.63
SSR4-206ENST00000460616 FMN2Q9NZ56 1722 aa18.97■□□□□ 0.63
SSR4-206ENST00000460616 ADGRL3Q9HAR2 1447 aa18.97■□□□□ 0.63
SSR4-206ENST00000460616 ZNF428Q96B54 188 aa18.96■□□□□ 0.63
SSR4-206ENST00000460616 ATP7BP35670 1465 aa18.96■□□□□ 0.63
SSR4-206ENST00000460616 ZGPATQ8N5A5 531 aaKnown RBP18.96■□□□□ 0.63
SSR4-206ENST00000460616 CCDC94Q9BW85 323 aaPredicted RBP18.96■□□□□ 0.63
SSR4-206ENST00000460616 ANKRD36BQ8N2N9 1353 aa18.95■□□□□ 0.62
SSR4-206ENST00000460616 AK9Q5TCS8 1911 aa18.95■□□□□ 0.62
SSR4-206ENST00000460616 C14orf37Q86TY3 774 aa18.95■□□□□ 0.62
SSR4-206ENST00000460616 ZDHHC9Q9Y397 364 aa18.95■□□□□ 0.62
SSR4-206ENST00000460616 CDC42BPGQ6DT37 1551 aa18.95■□□□□ 0.62
SSR4-206ENST00000460616 ST18O60284 1047 aa18.95■□□□□ 0.62
SSR4-206ENST00000460616 PLEKHM2Q8IWE5 1019 aa18.95■□□□□ 0.62
SSR4-206ENST00000460616 ARHGAP45Q92619 1136 aa18.95■□□□□ 0.62
SSR4-206ENST00000460616 PRDM10Q9NQV6 1147 aa18.95■□□□□ 0.62
SSR4-206ENST00000460616 LRRC7Q96NW7 1537 aa18.95■□□□□ 0.62
SSR4-206ENST00000460616 TOPAZ1Q8N9V7 1692 aa18.94■□□□□ 0.62
SSR4-206ENST00000460616 PTMAP06454 111 aaKnown RBP18.94■□□□□ 0.62
SSR4-206ENST00000460616 RNF214Q8ND24 703 aa18.94■□□□□ 0.62
SSR4-206ENST00000460616 KIAA2012Q0VF49 1180 aa18.93■□□□□ 0.62
SSR4-206ENST00000460616 NSFL1CQ9UNZ2 370 aaKnown RBP18.93■□□□□ 0.62
SSR4-206ENST00000460616 INTS3Q68E01 1043 aaKnown RBP18.93■□□□□ 0.62
SSR4-206ENST00000460616 PUS7Q96PZ0 661 aaKnown RBP18.93■□□□□ 0.62
SSR4-206ENST00000460616 MRPL50Q8N5N7 158 aaKnown RBP18.92■□□□□ 0.62
SSR4-206ENST00000460616 NUDT16Q96DE0 195 aaKnown RBP18.92■□□□□ 0.62
SSR4-206ENST00000460616 TTC22Q5TAA0 569 aa18.92■□□□□ 0.62
SSR4-206ENST00000460616 ATAD2Q6PL18 1390 aa18.91■□□□□ 0.62
SSR4-206ENST00000460616 MBD3O95983 291 aa18.91■□□□□ 0.62
SSR4-206ENST00000460616 DNTTIP2Q5QJE6 756 aaKnown RBP18.91■□□□□ 0.62
SSR4-206ENST00000460616 MYRIPQ8NFW9 859 aa18.91■□□□□ 0.62
SSR4-206ENST00000460616 CHAMP1Q96JM3 812 aa18.91■□□□□ 0.62
SSR4-206ENST00000460616 CD163L1Q9NR16 1453 aa18.91■□□□□ 0.62
SSR4-206ENST00000460616 GGNBP2Q9H3C7 697 aa18.91■□□□□ 0.62
SSR4-206ENST00000460616 CABP1Q9NZU7 370 aa18.91■□□□□ 0.62
SSR4-206ENST00000460616 ZHX1Q9UKY1 873 aaPredicted RBP18.91■□□□□ 0.62
SSR4-206ENST00000460616 VAMP4O75379 141 aa18.9■□□□□ 0.62
SSR4-206ENST00000460616 UTP14CQ5TAP6 766 aaKnown RBP18.9■□□□□ 0.62
SSR4-206ENST00000460616 DMTNQ08495 405 aa18.9■□□□□ 0.62
SSR4-206ENST00000460616 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.9■□□□□ 0.626e-9■□□□□ 9.1
SSR4-206ENST00000460616 ITSN1Q15811 1721 aa18.89■□□□□ 0.61
SSR4-206ENST00000460616 DIAPH1O60610 1272 aaKnown RBP18.89■□□□□ 0.61
SSR4-206ENST00000460616 LTBP4Q8N2S1 1624 aa18.88■□□□□ 0.61
SSR4-206ENST00000460616 FOXD4L5Q5VV16 416 aaPredicted RBP18.88■□□□□ 0.61
SSR4-206ENST00000460616 CASC1Q6TDU7 716 aa18.88■□□□□ 0.61
SSR4-206ENST00000460616 C16orf71Q8IYS4 520 aaPredicted RBP18.88■□□□□ 0.61
SSR4-206ENST00000460616 FOXD4L4Q8WXT5 416 aaPredicted RBP18.88■□□□□ 0.61
SSR4-206ENST00000460616 TSPY26PQ9H489 355 aa18.88■□□□□ 0.61
SSR4-206ENST00000460616 A0A1W2PP64 1363 aa18.88■□□□□ 0.61
SSR4-206ENST00000460616 DCTPP1Q9H773 170 aa18.88■□□□□ 0.61
SSR4-206ENST00000460616 ZSCAN20P17040 1043 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms