RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 THUMPD2Q9BTF0 503 aaKnown RBP10.35□□□□□ -0.75
SFPQ-202ENST00000460428 NHSL1Q5SYE7 1610 aa10.35□□□□□ -0.75
SFPQ-202ENST00000460428 GNAT3A8MTJ3 354 aa10.34□□□□□ -0.75
SFPQ-202ENST00000460428 DCTN1Q14203 1278 aa10.34□□□□□ -0.75
SFPQ-202ENST00000460428 AMOTQ4VCS5 1084 aa10.34□□□□□ -0.75
SFPQ-202ENST00000460428 ATF7IPQ6VMQ6 1270 aa10.34□□□□□ -0.75
SFPQ-202ENST00000460428 MRPL50Q8N5N7 158 aaKnown RBP10.34□□□□□ -0.75
SFPQ-202ENST00000460428 RTF1Q92541 710 aaKnown RBP10.34□□□□□ -0.75
SFPQ-202ENST00000460428 SMC4Q9NTJ3 1288 aa10.34□□□□□ -0.75
SFPQ-202ENST00000460428 CEMIPQ8WUJ3 1361 aa10.34□□□□□ -0.75
SFPQ-202ENST00000460428 FAM208AQ9UK61 1670 aaKnown RBP10.34□□□□□ -0.75
SFPQ-202ENST00000460428 ERBB3P21860 1342 aa10.33□□□□□ -0.76
SFPQ-202ENST00000460428 OVOS2A0A0G2JMS6 1433 aa10.33□□□□□ -0.76
SFPQ-202ENST00000460428 TRIM27P14373 513 aa10.33□□□□□ -0.76
SFPQ-202ENST00000460428 TWISTNBQ3B726 338 aaPredicted RBP10.33□□□□□ -0.76
SFPQ-202ENST00000460428 CENPQQ7L2Z9 268 aaPredicted RBP10.33□□□□□ -0.76
SFPQ-202ENST00000460428 DZIP1LQ8IYY4 767 aaKnown RBP10.33□□□□□ -0.76
SFPQ-202ENST00000460428 C8orf58Q8NAV2 365 aa10.33□□□□□ -0.76
SFPQ-202ENST00000460428 PANK1Q8TE04 598 aa10.33□□□□□ -0.76
SFPQ-202ENST00000460428 ANKRD24Q8TF21 1146 aa10.33□□□□□ -0.76
SFPQ-202ENST00000460428 CLUAP1Q96AJ1 413 aa10.33□□□□□ -0.76
SFPQ-202ENST00000460428 AXIN2Q9Y2T1 843 aa10.33□□□□□ -0.76
SFPQ-202ENST00000460428 MAP3K5Q99683 1374 aa10.33□□□□□ -0.76
SFPQ-202ENST00000460428 RGPD2P0DJD1 1756 aa10.32□□□□□ -0.76
SFPQ-202ENST00000460428 ADAMTS7Q9UKP4 1686 aa10.32□□□□□ -0.76
SFPQ-202ENST00000460428 RLBP1P12271 317 aa10.32□□□□□ -0.76
SFPQ-202ENST00000460428 CANXP27824 592 aaKnown RBP10.32□□□□□ -0.76
SFPQ-202ENST00000460428 MVPQ14764 893 aaKnown RBP10.32□□□□□ -0.76
SFPQ-202ENST00000460428 PLEKHO1Q53GL0 409 aaPredicted RBP10.32□□□□□ -0.76
SFPQ-202ENST00000460428 MCM10Q7L590 875 aa10.32□□□□□ -0.76
SFPQ-202ENST00000460428 TSPYL6Q8N831 410 aa10.32□□□□□ -0.76
SFPQ-202ENST00000460428 IL17REQ8NFR9 667 aa10.32□□□□□ -0.76
SFPQ-202ENST00000460428 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.32□□□□□ -0.764e-10■■■■□ 26.1
SFPQ-202ENST00000460428 LTBP4Q8N2S1 1624 aa10.32□□□□□ -0.76
SFPQ-202ENST00000460428 LMOD2Q6P5Q4 547 aa10.31□□□□□ -0.76
SFPQ-202ENST00000460428 FRAT1Q92837 279 aaPredicted RBP10.31□□□□□ -0.76
SFPQ-202ENST00000460428 DDX17Q92841 729 aaKnown RBP10.31□□□□□ -0.76
SFPQ-202ENST00000460428 LTV1Q96GA3 475 aaPredicted RBP10.31□□□□□ -0.76
SFPQ-202ENST00000460428 NOB1Q9ULX3 412 aaKnown RBP10.31□□□□□ -0.76
SFPQ-202ENST00000460428 COG6Q9Y2V7 657 aa10.31□□□□□ -0.76
SFPQ-202ENST00000460428 LAS1LQ9Y4W2 734 aaKnown RBP10.31□□□□□ -0.76
SFPQ-202ENST00000460428 RGPD5Q99666 1765 aa10.3□□□□□ -0.76
SFPQ-202ENST00000460428 TAF7Q15545 349 aaPredicted RBP10.3□□□□□ -0.76
SFPQ-202ENST00000460428 AKAP4Q5JQC9 854 aa10.3□□□□□ -0.76
SFPQ-202ENST00000460428 BCL2L13Q9BXK5 485 aa10.3□□□□□ -0.76
SFPQ-202ENST00000460428 DDX19BQ9UMR2 479 aa10.3□□□□□ -0.76
SFPQ-202ENST00000460428 TCERG1O14776 1098 aaKnown RBP10.29□□□□□ -0.76
SFPQ-202ENST00000460428 ZC3H6P61129 1189 aaKnown RBP10.29□□□□□ -0.76
SFPQ-202ENST00000460428 LRRC59Q96AG4 307 aaKnown RBP10.29□□□□□ -0.76
SFPQ-202ENST00000460428 CHMP4BQ9H444 224 aaKnown RBP10.29□□□□□ -0.76
SFPQ-202ENST00000460428 TNNQ9UQP3 1299 aa10.29□□□□□ -0.76
SFPQ-202ENST00000460428 ABCC4O15439 1325 aa10.29□□□□□ -0.76
SFPQ-202ENST00000460428 POTEDQ86YR6 584 aa10.28□□□□□ -0.76
SFPQ-202ENST00000460428 USHBP1Q8N6Y0 703 aa10.28□□□□□ -0.76
SFPQ-202ENST00000460428 API5Q9BZZ5 524 aaKnown RBP10.28□□□□□ -0.76
SFPQ-202ENST00000460428 TSPYL4Q9UJ04 414 aa10.28□□□□□ -0.76
SFPQ-202ENST00000460428 AHDC1Q5TGY3 1603 aaPredicted RBP10.28□□□□□ -0.76
SFPQ-202ENST00000460428 PTPRCP08575 1304 aa10.28□□□□□ -0.76
SFPQ-202ENST00000460428 ABCA3Q99758 1704 aa10.27□□□□□ -0.76
SFPQ-202ENST00000460428 KDM3BQ7LBC6 1761 aa10.27□□□□□ -0.77
SFPQ-202ENST00000460428 HOXB7P09629 217 aa10.27□□□□□ -0.77
SFPQ-202ENST00000460428 FTSJ3Q8IY81 847 aaKnown RBP10.27□□□□□ -0.77
SFPQ-202ENST00000460428 CHMP4AQ9BY43 222 aa10.27□□□□□ -0.77
SFPQ-202ENST00000460428 ZBTB40Q9NUA8 1239 aa10.27□□□□□ -0.77
SFPQ-202ENST00000460428 ZBTB7BO15156 539 aaPredicted RBP10.26□□□□□ -0.77
SFPQ-202ENST00000460428 IGHDP01880 384 aa10.26□□□□□ -0.77
SFPQ-202ENST00000460428 HDAC1Q13547 482 aaPredicted RBP10.26□□□□□ -0.77
SFPQ-202ENST00000460428 TMEM57Q8N5G2 664 aa10.26□□□□□ -0.77
SFPQ-202ENST00000460428 CABLES1Q8TDN4 633 aa10.26□□□□□ -0.77
SFPQ-202ENST00000460428 PCDHB15Q9Y5E8 787 aa10.26□□□□□ -0.77
SFPQ-202ENST00000460428 SIPA1L3O60292 1781 aaPredicted RBP10.26□□□□□ -0.77
SFPQ-202ENST00000460428 HEG1Q9ULI3 1381 aa10.26□□□□□ -0.77
SFPQ-202ENST00000460428 RGS12O14924 1447 aa10.25□□□□□ -0.77
SFPQ-202ENST00000460428 PKD1L3Q7Z443 1732 aa10.25□□□□□ -0.77
SFPQ-202ENST00000460428 CACNA1FO60840 1977 aa10.25□□□□□ -0.77
SFPQ-202ENST00000460428 ELL2O00472 640 aaPredicted RBP10.25□□□□□ -0.77
SFPQ-202ENST00000460428 RNMTO43148 476 aaKnown RBP10.25□□□□□ -0.77
SFPQ-202ENST00000460428 INTS3Q68E01 1043 aaKnown RBP10.25□□□□□ -0.77
SFPQ-202ENST00000460428 ZNF530Q6P9A1 599 aaPredicted RBP10.25□□□□□ -0.77
SFPQ-202ENST00000460428 COL22A1Q8NFW1 1626 aaPredicted RBP10.25□□□□□ -0.77
SFPQ-202ENST00000460428 ZBTB7CA1YPR0 619 aa10.24□□□□□ -0.77
SFPQ-202ENST00000460428 TATP17735 454 aaPredicted RBP10.24□□□□□ -0.77
SFPQ-202ENST00000460428 KRT24Q2M2I5 525 aa10.24□□□□□ -0.77
SFPQ-202ENST00000460428 RWDD1Q9H446 243 aaPredicted RBP10.24□□□□□ -0.77
SFPQ-202ENST00000460428 LGR6Q9HBX8 967 aa10.24□□□□□ -0.77
SFPQ-202ENST00000460428 MIS18AQ9NYP9 233 aa10.24□□□□□ -0.77
SFPQ-202ENST00000460428 RBM19Q9Y4C8 960 aaKnown RBP10.24□□□□□ -0.77
SFPQ-202ENST00000460428 WDR17Q8IZU2 1322 aa10.24□□□□□ -0.77
SFPQ-202ENST00000460428 COL5A2P05997 1499 aaPredicted RBP10.23□□□□□ -0.77
SFPQ-202ENST00000460428 EIF4A1P60842 406 aaKnown RBP10.23□□□□□ -0.77
SFPQ-202ENST00000460428 C1orf141Q5JVX7 400 aa10.23□□□□□ -0.77
SFPQ-202ENST00000460428 CCDC30Q5VVM6 783 aa10.23□□□□□ -0.77
SFPQ-202ENST00000460428 RAPGEF4Q8WZA2 1011 aa10.23□□□□□ -0.77
SFPQ-202ENST00000460428 SPG7Q9UQ90 795 aa10.23□□□□□ -0.77
SFPQ-202ENST00000460428 VIRMAQ69YN4 1812 aaKnown RBP10.23□□□□□ -0.77
SFPQ-202ENST00000460428 MRC1P22897 1456 aa10.23□□□□□ -0.77
SFPQ-202ENST00000460428 MEGF6O75095 1541 aa10.23□□□□□ -0.77
SFPQ-202ENST00000460428 ROBO1Q9Y6N7 1651 aa10.22□□□□□ -0.77
SFPQ-202ENST00000460428 SCN11AQ9UI33 1791 aa10.22□□□□□ -0.77
SFPQ-202ENST00000460428 PHKG2P15735 406 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms