RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 AKT1S1Q96B36 256 aa21.29■■□□□ 1
LMNA-209ENST00000459904 AMPHP49418 695 aa21.28■■□□□ 1
LMNA-209ENST00000459904 COG3Q96JB2 828 aa21.28■■□□□ 1
LMNA-209ENST00000459904 KIF20BQ96Q89 1820 aa21.27■■□□□ 1
LMNA-209ENST00000459904 COL24A1Q17RW2 1714 aa21.27■■□□□ 1
LMNA-209ENST00000459904 GGNBP2Q9H3C7 697 aa21.27■■□□□ 1
LMNA-209ENST00000459904 PNPLA7Q6ZV29 1317 aa21.27■□□□□ 0.99
LMNA-209ENST00000459904 NSD2O96028 1365 aa21.26■□□□□ 0.99
LMNA-209ENST00000459904 NBPF6Q5VWK0 638 aa21.24■□□□□ 0.99
LMNA-209ENST00000459904 PELP1Q8IZL8 1130 aaKnown RBP21.24■□□□□ 0.99
LMNA-209ENST00000459904 NBPF4Q96M43 638 aa21.24■□□□□ 0.99
LMNA-209ENST00000459904 ITGB4P16144 1822 aa21.23■□□□□ 0.99
LMNA-209ENST00000459904 ZCRB1Q8TBF4 217 aaKnown RBP21.23■□□□□ 0.99
LMNA-209ENST00000459904 TFCP2L1Q9NZI6 479 aa21.23■□□□□ 0.99
LMNA-209ENST00000459904 TAF1LQ8IZX4 1826 aa21.22■□□□□ 0.99
LMNA-209ENST00000459904 NLGN2Q8NFZ4 835 aa21.22■□□□□ 0.99
LMNA-209ENST00000459904 ANKRD36BQ8N2N9 1353 aa21.22■□□□□ 0.99
LMNA-209ENST00000459904 PUS7Q96PZ0 661 aaKnown RBP21.21■□□□□ 0.99
LMNA-209ENST00000459904 FYB1O15117 783 aa21.2■□□□□ 0.98
LMNA-209ENST00000459904 GPR162Q16538 588 aa21.2■□□□□ 0.98
LMNA-209ENST00000459904 C5P01031 1676 aa21.2■□□□□ 0.98
LMNA-209ENST00000459904 TOGARAM1Q9Y4F4 1720 aa21.19■□□□□ 0.98
LMNA-209ENST00000459904 MSH5O43196 834 aa21.19■□□□□ 0.98
LMNA-209ENST00000459904 SLC27A3Q5K4L6 730 aa21.19■□□□□ 0.98
LMNA-209ENST00000459904 MSL1Q68DK7 614 aa21.18■□□□□ 0.98
LMNA-209ENST00000459904 CCNL1Q9UK58 526 aaPredicted RBP21.18■□□□□ 0.98
LMNA-209ENST00000459904 HSP90AB2PQ58FF8 381 aa21.17■□□□□ 0.98
LMNA-209ENST00000459904 SMIM5Q71RC9 77 aa21.17■□□□□ 0.98
LMNA-209ENST00000459904 MAP2P11137 1827 aaKnown RBP21.17■□□□□ 0.98
LMNA-209ENST00000459904 COL23A1Q86Y22 540 aaPredicted RBP21.16■□□□□ 0.98
LMNA-209ENST00000459904 MAP3K5Q99683 1374 aa21.15■□□□□ 0.98
LMNA-209ENST00000459904 POLD1P28340 1107 aa21.15■□□□□ 0.98
LMNA-209ENST00000459904 USP47Q96K76 1375 aa21.14■□□□□ 0.98
LMNA-209ENST00000459904 SLC16A10Q8TF71 515 aa21.13■□□□□ 0.97
LMNA-209ENST00000459904 RTL1A6NKG5 1358 aa21.12■□□□□ 0.97
LMNA-209ENST00000459904 RAPGEF4Q8WZA2 1011 aa21.12■□□□□ 0.97
LMNA-209ENST00000459904 TATP17735 454 aaPredicted RBP21.11■□□□□ 0.97
LMNA-209ENST00000459904 TMF1P82094 1093 aa21.11■□□□□ 0.97
LMNA-209ENST00000459904 CARD14Q9BXL6 1004 aa21.11■□□□□ 0.97
LMNA-209ENST00000459904 EMILIN1Q9Y6C2 1016 aa21.11■□□□□ 0.97
LMNA-209ENST00000459904 YBX3P16989 372 aaKnown RBP eCLIP21.1■□□□□ 0.97
LMNA-209ENST00000459904 MPRIPQ6WCQ1 1025 aa21.1■□□□□ 0.97
LMNA-209ENST00000459904 AMIGO3Q86WK7 504 aa21.1■□□□□ 0.97
LMNA-209ENST00000459904 PKD1L3Q7Z443 1732 aa21.09■□□□□ 0.97
LMNA-209ENST00000459904 UBR3Q6ZT12 1888 aa21.09■□□□□ 0.97
LMNA-209ENST00000459904 SENP3-EIF4A1A0A087X0R7 540 aa21.09■□□□□ 0.97
LMNA-209ENST00000459904 CYP27B1O15528 508 aa21.09■□□□□ 0.97
LMNA-209ENST00000459904 SMG6Q86US8 1419 aaKnown RBP21.08■□□□□ 0.97
LMNA-209ENST00000459904 WWC3Q9ULE0 1092 aa21.08■□□□□ 0.97
LMNA-209ENST00000459904 C4BP0C0L5 1744 aa21.07■□□□□ 0.96
LMNA-209ENST00000459904 PPM1GO15355 546 aaPredicted RBP21.07■□□□□ 0.96
LMNA-209ENST00000459904 INSRP06213 1382 aa21.07■□□□□ 0.96
LMNA-209ENST00000459904 NSD3Q9BZ95 1437 aa21.06■□□□□ 0.96
LMNA-209ENST00000459904 C1QTNF8P60827 252 aa21.06■□□□□ 0.96
LMNA-209ENST00000459904 PALLDQ8WX93 1383 aa21.06■□□□□ 0.96
LMNA-209ENST00000459904 FLT4P35916 1363 aa21.05■□□□□ 0.96
LMNA-209ENST00000459904 PCDH11XQ9BZA7 1347 aa21.04■□□□□ 0.96
LMNA-209ENST00000459904 PCDH11YQ9BZA8 1340 aa21.04■□□□□ 0.96
LMNA-209ENST00000459904 ANKRD26Q9UPS8 1709 aa21.04■□□□□ 0.96
LMNA-209ENST00000459904 PHF14O94880 888 aa21.03■□□□□ 0.96
LMNA-209ENST00000459904 POLR3GLQ9BT43 218 aa21.02■□□□□ 0.96
LMNA-209ENST00000459904 CGNL1Q0VF96 1302 aa21.02■□□□□ 0.95
LMNA-209ENST00000459904 PIGBQ92521 554 aa21.01■□□□□ 0.95
LMNA-209ENST00000459904 TNNT2P45379 298 aaPredicted RBP20.99■□□□□ 0.95
LMNA-209ENST00000459904 CEP350Q5VT06 3117 aa20.98■□□□□ 0.95
LMNA-209ENST00000459904 SLC24A1O60721 1099 aa20.98■□□□□ 0.95
LMNA-209ENST00000459904 GIGYF1O75420 1035 aaPredicted RBP20.98■□□□□ 0.95
LMNA-209ENST00000459904 EYA1Q99502 592 aa20.98■□□□□ 0.95
LMNA-209ENST00000459904 LINC00116Q8NCU8 138 aa20.97■□□□□ 0.95
LMNA-209ENST00000459904 AK7Q96M32 723 aa20.97■□□□□ 0.95
LMNA-209ENST00000459904 ASAP1Q9ULH1 1129 aa20.96■□□□□ 0.95
LMNA-209ENST00000459904 N4BP2Q86UW6 1770 aaPredicted RBP20.95■□□□□ 0.94
LMNA-209ENST00000459904 NCAPD2Q15021 1401 aa20.95■□□□□ 0.94
LMNA-209ENST00000459904 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.94■□□□□ 0.94
LMNA-209ENST00000459904 ZNF526Q8TF50 670 aaPredicted RBP20.94■□□□□ 0.94
LMNA-209ENST00000459904 TRIM26Q12899 539 aaPredicted RBP20.93■□□□□ 0.94
LMNA-209ENST00000459904 ITPK1Q13572 414 aa20.93■□□□□ 0.94
LMNA-209ENST00000459904 CDCA8Q53HL2 280 aa20.93■□□□□ 0.94
LMNA-209ENST00000459904 POLKQ9UBT6 870 aa20.93■□□□□ 0.94
LMNA-209ENST00000459904 KIF24Q5T7B8 1368 aa20.93■□□□□ 0.94
LMNA-209ENST00000459904 ATP10DQ9P241 1426 aa20.93■□□□□ 0.94
LMNA-209ENST00000459904 LOC102724428A0A0B4J2F2 783 aa20.92■□□□□ 0.94
LMNA-209ENST00000459904 SIK1P57059 783 aa20.92■□□□□ 0.94
LMNA-209ENST00000459904 GRIN3BO60391 1043 aa20.91■□□□□ 0.94
LMNA-209ENST00000459904 NKX1-1Q15270 411 aaPredicted RBP20.91■□□□□ 0.94
LMNA-209ENST00000459904 WASHC2AQ641Q2 1341 aa20.91■□□□□ 0.94
LMNA-209ENST00000459904 SMARCC1Q92922 1105 aaPredicted RBP20.91■□□□□ 0.94
LMNA-209ENST00000459904 SPG7Q9UQ90 795 aa20.91■□□□□ 0.94
LMNA-209ENST00000459904 EIF4A2Q14240 407 aaKnown RBP20.9■□□□□ 0.94
LMNA-209ENST00000459904 TMOD3Q9NYL9 352 aa20.9■□□□□ 0.94
LMNA-209ENST00000459904 CD2APQ9Y5K6 639 aa20.9■□□□□ 0.94
LMNA-209ENST00000459904 MYH14Q7Z406 1995 aaKnown RBP20.9■□□□□ 0.94
LMNA-209ENST00000459904 IGSF1Q8N6C5 1336 aa20.89■□□□□ 0.93
LMNA-209ENST00000459904 PHKG2P15735 406 aa20.89■□□□□ 0.93
LMNA-209ENST00000459904 FLAD1Q8NFF5 587 aa20.89■□□□□ 0.93
LMNA-209ENST00000459904 KIAA1551Q9HCM1 1747 aa20.88■□□□□ 0.93
LMNA-209ENST00000459904 GNPATO15228 680 aa20.88■□□□□ 0.93
LMNA-209ENST00000459904 ATG3Q9NT62 314 aa20.88■□□□□ 0.93
LMNA-209ENST00000459904 ATP6V1AP38606 617 aa20.87■□□□□ 0.93
LMNA-209ENST00000459904 SLC4A9Q96Q91 983 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms