RNA–Protein interactions for RNA: ENST00000459711.5

CHRD-207, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 503 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-207ENST00000459711 PRIM1P49642 420 aaKnown RBP28.32■■■□□ 2.12
CHRD-207ENST00000459711 SYTL4Q96C24 671 aaPredicted RBP28.32■■■□□ 2.12
CHRD-207ENST00000459711 CEP350Q5VT06 3117 aa28.32■■■□□ 2.12
CHRD-207ENST00000459711 TERF2IPQ9NYB0 399 aa28.31■■■□□ 2.12
CHRD-207ENST00000459711 NEUROD1Q13562 356 aa28.3■■■□□ 2.12
CHRD-207ENST00000459711 LTV1Q96GA3 475 aaPredicted RBP28.3■■■□□ 2.12
CHRD-207ENST00000459711 GRIN3BO60391 1043 aa28.28■■■□□ 2.12
CHRD-207ENST00000459711 YBX3P16989 372 aaKnown RBP eCLIP28.28■■■□□ 2.12
CHRD-207ENST00000459711 IFFO2Q5TF58 517 aa28.26■■■□□ 2.11
CHRD-207ENST00000459711 CARD11Q9BXL7 1154 aa28.26■■■□□ 2.11
CHRD-207ENST00000459711 CCNL1Q9UK58 526 aaPredicted RBP28.26■■■□□ 2.11
CHRD-207ENST00000459711 RGPD2P0DJD1 1756 aa28.24■■■□□ 2.11
CHRD-207ENST00000459711 MEGF6O75095 1541 aa28.24■■■□□ 2.11
CHRD-207ENST00000459711 ZCRB1Q8TBF4 217 aaKnown RBP28.24■■■□□ 2.11
CHRD-207ENST00000459711 PUS7Q96PZ0 661 aaKnown RBP28.24■■■□□ 2.11
CHRD-207ENST00000459711 MAP3K19Q56UN5 1328 aa28.23■■■□□ 2.11
CHRD-207ENST00000459711 HOXC9P31274 260 aa28.23■■■□□ 2.11
CHRD-207ENST00000459711 COL23A1Q86Y22 540 aaPredicted RBP28.23■■■□□ 2.11
CHRD-207ENST00000459711 MSH5O43196 834 aa28.2■■■□□ 2.1
CHRD-207ENST00000459711 USP47Q96K76 1375 aa28.2■■■□□ 2.1
CHRD-207ENST00000459711 AMPHP49418 695 aa28.19■■■□□ 2.1
CHRD-207ENST00000459711 COG3Q96JB2 828 aa28.19■■■□□ 2.1
CHRD-207ENST00000459711 ATP10DQ9P241 1426 aa28.18■■■□□ 2.1
CHRD-207ENST00000459711 MSL1Q68DK7 614 aa28.17■■■□□ 2.1
CHRD-207ENST00000459711 C5P01031 1676 aa28.16■■■□□ 2.1
CHRD-207ENST00000459711 FBLN1P23142 703 aa28.16■■■□□ 2.1
CHRD-207ENST00000459711 RTL1A6NKG5 1358 aa28.15■■■□□ 2.1
CHRD-207ENST00000459711 CD2APQ9Y5K6 639 aa28.14■■■□□ 2.1
CHRD-207ENST00000459711 CGNL1Q0VF96 1302 aa28.14■■■□□ 2.09
CHRD-207ENST00000459711 NBPF6Q5VWK0 638 aa28.12■■■□□ 2.09
CHRD-207ENST00000459711 NBPF4Q96M43 638 aa28.12■■■□□ 2.09
CHRD-207ENST00000459711 TAF1LQ8IZX4 1826 aa28.11■■■□□ 2.09
CHRD-207ENST00000459711 ADCY9O60503 1353 aa28.11■■■□□ 2.09
CHRD-207ENST00000459711 FLAD1Q8NFF5 587 aa28.1■■■□□ 2.09
CHRD-207ENST00000459711 HMGB2P26583 209 aaKnown RBP28.09■■■□□ 2.09
CHRD-207ENST00000459711 USHBP1Q8N6Y0 703 aa28.08■■■□□ 2.09
CHRD-207ENST00000459711 RAPGEF4Q8WZA2 1011 aa28.08■■■□□ 2.09
CHRD-207ENST00000459711 TESK2Q96S53 571 aa28.08■■■□□ 2.09
CHRD-207ENST00000459711 GPBP1L1Q9HC44 474 aaPredicted RBP28.08■■■□□ 2.09
CHRD-207ENST00000459711 RRS1Q15050 365 aaKnown RBP28.07■■■□□ 2.08
CHRD-207ENST00000459711 PALLDQ8WX93 1383 aa28.07■■■□□ 2.08
CHRD-207ENST00000459711 SMG6Q86US8 1419 aaKnown RBP28.06■■■□□ 2.08
CHRD-207ENST00000459711 TATP17735 454 aaPredicted RBP28.05■■■□□ 2.08
CHRD-207ENST00000459711 PCDH11XQ9BZA7 1347 aa28.05■■■□□ 2.08
CHRD-207ENST00000459711 PCDH11YQ9BZA8 1340 aa28.05■■■□□ 2.08
CHRD-207ENST00000459711 C4BP0C0L5 1744 aa28.04■■■□□ 2.08
CHRD-207ENST00000459711 TOGARAM1Q9Y4F4 1720 aa28.03■■■□□ 2.08
CHRD-207ENST00000459711 HSPA6P17066 643 aa28.02■■■□□ 2.08
CHRD-207ENST00000459711 UBR3Q6ZT12 1888 aa28■■■□□ 2.07
CHRD-207ENST00000459711 ST20-MTHFSA0A0A6YYL1 179 aa28■■■□□ 2.07
CHRD-207ENST00000459711 FYB1O15117 783 aa28■■■□□ 2.07
CHRD-207ENST00000459711 MPRIPQ6WCQ1 1025 aa28■■■□□ 2.07
CHRD-207ENST00000459711 INSRP06213 1382 aa27.99■■■□□ 2.07
CHRD-207ENST00000459711 ITGB4P16144 1822 aa27.99■■■□□ 2.07
CHRD-207ENST00000459711 SLC24A1O60721 1099 aa27.99■■■□□ 2.07
CHRD-207ENST00000459711 AMIGO3Q86WK7 504 aa27.99■■■□□ 2.07
CHRD-207ENST00000459711 TONSLQ96HA7 1378 aa27.99■■■□□ 2.07
CHRD-207ENST00000459711 IGSF1Q8N6C5 1336 aa27.98■■■□□ 2.07
CHRD-207ENST00000459711 ZNF526Q8TF50 670 aaPredicted RBP27.98■■■□□ 2.07
CHRD-207ENST00000459711 AK7Q96M32 723 aa27.98■■■□□ 2.07
CHRD-207ENST00000459711 GGNBP2Q9H3C7 697 aa27.98■■■□□ 2.07
CHRD-207ENST00000459711 CYP27B1O15528 508 aa27.97■■■□□ 2.07
CHRD-207ENST00000459711 SMARCC1Q92922 1105 aaPredicted RBP27.97■■■□□ 2.07
CHRD-207ENST00000459711 NSD3Q9BZ95 1437 aa27.96■■■□□ 2.07
CHRD-207ENST00000459711 HSP90AB2PQ58FF8 381 aa27.96■■■□□ 2.07
CHRD-207ENST00000459711 FLT4P35916 1363 aa27.95■■■□□ 2.06
CHRD-207ENST00000459711 PKD1L3Q7Z443 1732 aa27.95■■■□□ 2.06
CHRD-207ENST00000459711 KIF24Q5T7B8 1368 aa27.94■■■□□ 2.06
CHRD-207ENST00000459711 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.93■■■□□ 2.06
CHRD-207ENST00000459711 PHF14O94880 888 aa27.93■■■□□ 2.06
CHRD-207ENST00000459711 MAP2P11137 1827 aaKnown RBP27.92■■■□□ 2.06
CHRD-207ENST00000459711 KIF20BQ96Q89 1820 aa27.91■■■□□ 2.06
CHRD-207ENST00000459711 SSFA2P28290 1259 aa27.91■■■□□ 2.06
CHRD-207ENST00000459711 SMIM5Q71RC9 77 aa27.91■■■□□ 2.06
CHRD-207ENST00000459711 WWC3Q9ULE0 1092 aa27.91■■■□□ 2.06
CHRD-207ENST00000459711 CICQ96RK0 1608 aaPredicted RBP27.9■■■□□ 2.06
CHRD-207ENST00000459711 PIGBQ92521 554 aa27.9■■■□□ 2.06
CHRD-207ENST00000459711 KIF3CO14782 793 aa27.89■■■□□ 2.06
CHRD-207ENST00000459711 NCAPD2Q15021 1401 aa27.88■■■□□ 2.05
CHRD-207ENST00000459711 NKX1-1Q15270 411 aaPredicted RBP27.87■■■□□ 2.05
CHRD-207ENST00000459711 LINC00116Q8NCU8 138 aa27.87■■■□□ 2.05
CHRD-207ENST00000459711 LOC102724428A0A0B4J2F2 783 aa27.86■■■□□ 2.05
CHRD-207ENST00000459711 SIK1P57059 783 aa27.86■■■□□ 2.05
CHRD-207ENST00000459711 TMF1P82094 1093 aa27.83■■■□□ 2.05
CHRD-207ENST00000459711 EMILIN1Q9Y6C2 1016 aa27.82■■■□□ 2.04
CHRD-207ENST00000459711 KIF13BQ9NQT8 1826 aa27.82■■■□□ 2.04
CHRD-207ENST00000459711 SPG7Q9UQ90 795 aa27.81■■■□□ 2.04
CHRD-207ENST00000459711 PXDNLA1KZ92 1463 aa27.81■■■□□ 2.04
CHRD-207ENST00000459711 GNPATO15228 680 aa27.8■■■□□ 2.04
CHRD-207ENST00000459711 ITPK1Q13572 414 aa27.8■■■□□ 2.04
CHRD-207ENST00000459711 KIAA1551Q9HCM1 1747 aa27.8■■■□□ 2.04
CHRD-207ENST00000459711 TMOD3Q9NYL9 352 aa27.79■■■□□ 2.04
CHRD-207ENST00000459711 ANKRD26Q9UPS8 1709 aa27.78■■■□□ 2.04
CHRD-207ENST00000459711 MMP10P09238 476 aa27.78■■■□□ 2.04
CHRD-207ENST00000459711 ASAP1Q9ULH1 1129 aa27.78■■■□□ 2.04
CHRD-207ENST00000459711 ATP6V1AP38606 617 aa27.77■■■□□ 2.04
CHRD-207ENST00000459711 APLP1P51693 650 aa27.77■■■□□ 2.04
CHRD-207ENST00000459711 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.77■■■□□ 2.04
CHRD-207ENST00000459711 N4BP2Q86UW6 1770 aaPredicted RBP27.75■■■□□ 2.03
CHRD-207ENST00000459711 TGFB2P61812 414 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms